RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 DHX34Q14147 1143 aaKnown RBP3.29□□□□□ -1.88
PSPC1-205ENST00000497722 ALG11Q2TAA5 492 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 EIF2S3LQ2VIR3 472 aaKnown RBP3.29□□□□□ -1.88
PSPC1-205ENST00000497722 ATP13A5Q4VNC0 1218 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 SGO1Q5FBB7 561 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 PPP6R3Q5H9R7 873 aaPredicted RBP3.29□□□□□ -1.88
PSPC1-205ENST00000497722 IRAK1BP1Q5VVH5 260 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 CCNI2Q6ZMN8 369 aaPredicted RBP3.29□□□□□ -1.88
PSPC1-205ENST00000497722 QSOX2Q6ZRP7 698 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 CCDC129Q6ZRS4 1044 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 CACNA2D4Q7Z3S7 1137 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 TBC1D1Q86TI0 1168 aaPredicted RBP3.29□□□□□ -1.88
PSPC1-205ENST00000497722 ANKRD52Q8NB46 1076 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 OR14L1PQ8NHC6 308 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 ORAI1Q96D31 301 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 ARHGEF26Q96DR7 871 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 RRNAD1Q96FB5 475 aaKnown RBP3.29□□□□□ -1.88
PSPC1-205ENST00000497722 ADGRG7Q96K78 797 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 CMTM3Q96MX0 182 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 FIZ1Q96SL8 496 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 CSF3RQ99062 836 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 BARD1Q99728 777 aaKnown RBP3.29□□□□□ -1.88
PSPC1-205ENST00000497722 SH3GL2Q99962 352 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 FAM110AQ9BQ89 295 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 MAK16Q9BXY0 300 aaKnown RBP3.29□□□□□ -1.88
PSPC1-205ENST00000497722 GLIS2Q9BZE0 524 aaPredicted RBP3.29□□□□□ -1.88
PSPC1-205ENST00000497722 IL25Q9H293 177 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 SYNCQ9H7C4 482 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 DDX31Q9H8H2 851 aaKnown RBP3.29□□□□□ -1.88
PSPC1-205ENST00000497722 DDX4Q9NQI0 724 aaKnown RBP3.29□□□□□ -1.88
PSPC1-205ENST00000497722 SEPT11Q9NVA2 429 aaKnown RBP3.29□□□□□ -1.88
PSPC1-205ENST00000497722 HAUS2Q9NVX0 235 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 HCFC1R1Q9NWW0 138 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 MDFICQ9P1T7 246 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 CNOT8Q9UFF9 292 aaKnown RBP3.29□□□□□ -1.88
PSPC1-205ENST00000497722 SLCO3A1Q9UIG8 710 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 KCNG2Q9UJ96 466 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 VDAC3Q9Y277 283 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 LYVE1Q9Y5Y7 322 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 PIAS3Q9Y6X2 628 aa3.29□□□□□ -1.88
PSPC1-205ENST00000497722 PLSCR5A0PG75 271 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 C1orf226A1L170 272 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 DENND3A2RUS2 1198 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 SMTNL1A8MU46 457 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 KRTAP9-6A8MVA2 160 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 PTGES3LE9PB15 166 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 IFNL4K9M1U5 179 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 HS3ST1O14792 307 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 TGFB1I1O43294 461 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 GAGE7O76087 117 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 ZBTB11O95625 1053 aaPredicted RBP3.28□□□□□ -1.88
PSPC1-205ENST00000497722 DDX58O95786 925 aaKnown RBP3.28□□□□□ -1.88
PSPC1-205ENST00000497722 GAGE12FP0CL80 117 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 GAGE12GP0CL81 117 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 GAGE12IP0CL82 117 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 RARGP13631 454 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 BDKRB2P30411 391 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 SSTR2P30874 369 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 CASP2P42575 452 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 ERVFC1-1P60608 527 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 DCAF7P61962 342 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 CSNK2A1P68400 391 aaPredicted RBP3.28□□□□□ -1.88
PSPC1-205ENST00000497722 BNC1Q01954 994 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 NIPAL4Q0D2K0 466 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 ILF3Q12906 894 aaKnown RBP eCLIP3.28□□□□□ -1.88
PSPC1-205ENST00000497722 GAGE1Q13065 139 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 GAGE4Q13068 117 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 PDE1CQ14123 709 aaPredicted RBP3.28□□□□□ -1.88
PSPC1-205ENST00000497722 SF3B4Q15427 424 aaKnown RBP eCLIP3.28□□□□□ -1.883e-12■■■■■ 40.8
PSPC1-205ENST00000497722 MAPRE1Q15691 268 aaKnown RBP3.28□□□□□ -1.88
PSPC1-205ENST00000497722 C2orf68Q2NKX9 166 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 KRTAP24-1Q3LI83 254 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 AMZ1Q400G9 498 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 GKAP1Q5VSY0 366 aaPredicted RBP3.28□□□□□ -1.88
PSPC1-205ENST00000497722 DUS1LQ6P1R4 473 aaKnown RBP3.28□□□□□ -1.88
PSPC1-205ENST00000497722 FAM122CQ6P4D5 195 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 KLHL35Q6PF15 583 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 NCEH1Q6PIU2 408 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 RHBDF2Q6PJF5 856 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 SARM1Q6SZW1 724 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 PQLC2Q6ZP29 291 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 GPR180Q86V85 440 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 TICAM1Q8IUC6 712 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 WDR63Q8IWG1 891 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 ARHGAP12Q8IWW6 846 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 CSNK2A3Q8NEV1 391 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 SGCDQ92629 289 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 RND1Q92730 232 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 SLC41A2Q96JW4 573 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 WDFY2Q96P53 400 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 NUDCD1Q96RS6 583 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 STRA6Q9BX79 667 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 POLR1BQ9H9Y6 1135 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 MKKSQ9NPJ1 570 aaPredicted RBP3.28□□□□□ -1.88
PSPC1-205ENST00000497722 TXLNGQ9NUQ3 528 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 CWC15Q9P013 229 aaKnown RBP3.28□□□□□ -1.88
PSPC1-205ENST00000497722 SLC45A1Q9Y2W3 748 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 LOXL2Q9Y4K0 774 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 PCDHGB1Q9Y5G3 927 aa3.28□□□□□ -1.88
PSPC1-205ENST00000497722 SESN1Q9Y6P5 492 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms