RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 TSNAXIP1Q2TAA8 658 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 CCDC153Q494R4 210 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 C9orf64Q5T6V5 341 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 CRTC1Q6UUV9 634 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 DPPA4Q7L190 304 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 TTC7BQ86TV6 843 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 ZSWIM9Q86XI8 627 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 CHPFQ8IZ52 775 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 ZNF513Q8N8E2 541 aaPredicted RBP12.15□□□□□ -0.46
HPS1-213ENST00000497527 PIP4K2CQ8TBX8 421 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 CKAP2Q8WWK9 683 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 SREK1Q8WXA9 508 aaKnown RBP12.15□□□□□ -0.46
HPS1-213ENST00000497527 RAB7BQ96AH8 199 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 VOPP1Q96AW1 172 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 ULK4Q96C45 1275 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 PAIP2Q9BPZ3 127 aaKnown RBP12.15□□□□□ -0.46
HPS1-213ENST00000497527 SLC13A1Q9BZW2 595 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 EPN3Q9H201 632 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 SUDS3Q9H7L9 328 aaPredicted RBP12.15□□□□□ -0.46
HPS1-213ENST00000497527 POPDC3Q9HBV1 291 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 BPIFA1Q9NP55 256 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.15□□□□□ -0.46
HPS1-213ENST00000497527 NFKBIL1Q9UBC1 381 aaPredicted RBP12.15□□□□□ -0.46
HPS1-213ENST00000497527 B4GALT6Q9UBX8 382 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 PPM1HQ9ULR3 514 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 ACOT9Q9Y305 439 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 PLLPQ9Y342 182 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 PCDHB1Q9Y5F3 818 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 STON1Q9Y6Q2 735 aa12.15□□□□□ -0.46
HPS1-213ENST00000497527 LAMA2P24043 3122 aaKnown RBP12.14□□□□□ -0.47
HPS1-213ENST00000497527 PLXNB3Q9ULL4 1909 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 GMNCA6NCL1 334 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 OR51F1A6NGY5 319 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 F8W8V4 182 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 H0Y858 1186 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 CCL22O00626 93 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 SRP72O76094 671 aaKnown RBP12.14□□□□□ -0.47
HPS1-213ENST00000497527 PRAMEF1O95521 474 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 PYGLP06737 847 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 CTSLP07711 333 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 DHRS4L1P0CG22 281 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 HLA-EP13747 358 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 TIMP2P16035 220 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 SP100P23497 879 aaPredicted RBP12.14□□□□□ -0.47
HPS1-213ENST00000497527 IL12RB1P42701 662 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 PTGER3P43115 390 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 ADARP55265 1226 aaKnown RBP12.14□□□□□ -0.47
HPS1-213ENST00000497527 WDR4P57081 412 aaKnown RBP12.14□□□□□ -0.47
HPS1-213ENST00000497527 DCDC1P59894 354 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 XIAPP98170 497 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 PEX6Q13608 980 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 MPP2Q14168 576 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 STARD3Q14849 445 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 ZKSCAN8Q15776 578 aaPredicted RBP12.14□□□□□ -0.47
HPS1-213ENST00000497527 LEXMQ3ZCV2 418 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 HECTD2Q5U5R9 776 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 EGFLAMQ63HQ2 1017 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 TTC19Q6DKK2 380 aaPredicted RBP12.14□□□□□ -0.47
HPS1-213ENST00000497527 CNSTQ6PJW8 725 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 RGS9BPQ6ZS82 235 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 TAS2R42Q7RTR8 314 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 TBC1D1Q86TI0 1168 aaPredicted RBP12.14□□□□□ -0.47
HPS1-213ENST00000497527 SLC41A1Q8IVJ1 513 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 LRRC8CQ8TDW0 803 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 MYLIPQ8WY64 445 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 CHFRQ96EP1 664 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 LRCH3Q96II8 777 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 FAM111AQ96PZ2 611 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 SMIM14Q96QK8 99 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 CDX2Q99626 313 aaPredicted RBP12.14□□□□□ -0.47
HPS1-213ENST00000497527 ASB8Q9H765 288 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 KCNK12Q9HB15 430 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 SYTL2Q9HCH5 934 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 KCTD5Q9NXV2 234 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 MARCH4Q9P2E8 410 aaPredicted RBP12.14□□□□□ -0.47
HPS1-213ENST00000497527 CRLS1Q9UJA2 301 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 VWA7Q9Y334 891 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 PIAS3Q9Y6X2 628 aa12.14□□□□□ -0.47
HPS1-213ENST00000497527 LRRK1Q38SD2 2015 aa12.13□□□□□ -0.47
HPS1-213ENST00000497527 UBA6A0AVT1 1052 aaPredicted RBP12.13□□□□□ -0.47
HPS1-213ENST00000497527 H3BMM5 538 aa12.13□□□□□ -0.47
HPS1-213ENST00000497527 BIRC5O15392 142 aa12.13□□□□□ -0.47
HPS1-213ENST00000497527 SYNCRIPO60506 623 aaKnown RBP12.13□□□□□ -0.47
HPS1-213ENST00000497527 ADH1BP00325 375 aa12.13□□□□□ -0.47
HPS1-213ENST00000497527 IL1BP01584 269 aa12.13□□□□□ -0.47
HPS1-213ENST00000497527 ESR1P03372 595 aa12.13□□□□□ -0.47
HPS1-213ENST00000497527 CHRM1P11229 460 aaPredicted RBP12.13□□□□□ -0.47
HPS1-213ENST00000497527 NEFHP12036 1026 aa12.13□□□□□ -0.47
HPS1-213ENST00000497527 ZNF7P17097 686 aaPredicted RBP12.13□□□□□ -0.47
HPS1-213ENST00000497527 BPIP17213 487 aa12.13□□□□□ -0.47
HPS1-213ENST00000497527 SAT1P21673 171 aa12.13□□□□□ -0.47
HPS1-213ENST00000497527 CD9P21926 228 aa12.13□□□□□ -0.47
HPS1-213ENST00000497527 RPS3P23396 243 aaKnown RBP eCLIP12.13□□□□□ -0.47
HPS1-213ENST00000497527 SPINT3P49223 89 aa12.13□□□□□ -0.47
HPS1-213ENST00000497527 CSRP3P50461 194 aa12.13□□□□□ -0.47
HPS1-213ENST00000497527 MRPS21P82921 87 aaKnown RBP12.13□□□□□ -0.47
HPS1-213ENST00000497527 MESP2Q0VG99 397 aa12.13□□□□□ -0.47
HPS1-213ENST00000497527 GRSF1Q12849 480 aaKnown RBP eCLIP12.13□□□□□ -0.47
HPS1-213ENST00000497527 SFSWAPQ12872 951 aaKnown RBP12.13□□□□□ -0.47
HPS1-213ENST00000497527 CAMK2GQ13555 558 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms