RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 KDRP35968 1356 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 ARSEP51690 589 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 JAK3P52333 1124 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 CDH13P55290 713 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 RPS7P62081 194 aaKnown RBP6.12□□□□□ -1.43
BRCA1-224ENST00000497488 TXNL4AP83876 142 aaKnown RBP6.12□□□□□ -1.43
BRCA1-224ENST00000497488 GFPT1Q06210 699 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-224ENST00000497488 ACSM1Q08AH1 577 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 ELP6Q0PNE2 266 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 RNF151Q2KHN1 245 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 BOLA3Q53S33 107 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 ZNF789Q5FWF6 425 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 TTC39AQ5SRH9 613 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 FAM102AQ5T9C2 384 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-224ENST00000497488 DHRS7BQ6IAN0 325 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-224ENST00000497488 TMEM211Q6ICI0 200 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 DPY19L3Q6ZPD9 716 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 C11orf57Q6ZUT1 292 aaPredicted RBP6.12□□□□□ -1.43
BRCA1-224ENST00000497488 LAS2Q8IYD9 372 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 KDM8Q8N371 416 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 OR56A1Q8NGH5 318 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 EXT2Q93063 718 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 MOAP1Q96BY2 351 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 DTNBP1Q96EV8 351 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 BBS4Q96RK4 519 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 DCLRE1CQ96SD1 692 aaKnown RBP6.12□□□□□ -1.43
BRCA1-224ENST00000497488 DIRC2Q96SL1 478 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 ZSWIM1Q9BR11 485 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 C1QTNF5Q9BXJ0 243 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 OSBPL8Q9BZF1 889 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 RTN4RQ9BZR6 473 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 SLCO5A1Q9H2Y9 848 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 SOHLH2Q9NX45 425 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 DHDHQ9UQ10 334 aa6.12□□□□□ -1.43
BRCA1-224ENST00000497488 R3HDM2Q9Y2K5 976 aaKnown RBP6.12□□□□□ -1.43
BRCA1-224ENST00000497488 STRAPQ9Y3F4 350 aaKnown RBP6.12□□□□□ -1.43
BRCA1-224ENST00000497488 ITSN2Q9NZM3 1697 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 KDM5CP41229 1560 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 ZFYVE16Q7Z3T8 1539 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 SYCP2Q9BX26 1530 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 NCOA2Q15596 1464 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 ERICH4A6NGS2 130 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 C5orf52A6NGY3 159 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 CBY3A6NI87 242 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 H0YCG3 227 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 CASQ2O14958 399 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-224ENST00000497488 ANGPT2O15123 496 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 ST8SIA3O43173 380 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 GPC4O75487 556 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 CBX6O95503 412 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 DIRAS3O95661 229 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 TGFAP01135 160 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 RLN1P04808 185 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 TSPY4P0CV99 314 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 TSPY10P0CW01 314 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 CCDC192P0DO97 292 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 TOP1P11387 765 aaKnown RBP6.11□□□□□ -1.43
BRCA1-224ENST00000497488 PRG2P13727 222 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 NCF1P14598 390 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-224ENST00000497488 ANXA7P20073 488 aaKnown RBP6.11□□□□□ -1.43
BRCA1-224ENST00000497488 ITGAXP20702 1163 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 DRD4P21917 467 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 RPL13P26373 211 aaKnown RBP6.11□□□□□ -1.43
BRCA1-224ENST00000497488 CDC25CP30307 473 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 SLC8A1P32418 973 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 MDH1P40925 334 aaKnown RBP6.11□□□□□ -1.43
BRCA1-224ENST00000497488 ADPRHP54922 357 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 FPGSQ05932 587 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 CCDC15Q0P6D6 951 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 PTPRCAPQ14761 206 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 USP39Q53GS9 565 aaKnown RBP6.11□□□□□ -1.43
BRCA1-224ENST00000497488 HS1BP3Q53T59 392 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 LRIF1Q5T3J3 769 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 NEK5Q6P3R8 708 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 C1orf186Q6ZWK4 172 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 HAUS6Q7Z4H7 955 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 DTX2Q86UW9 622 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 TMPRSS6Q8IU80 811 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 ARID3BQ8IVW6 561 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-224ENST00000497488 OR52E1Q8NGJ3 308 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 C9orf43Q8TAL5 461 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-224ENST00000497488 FAM110DQ8TAY7 271 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-224ENST00000497488 LRRC8CQ8TDW0 803 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 RNF139Q8WU17 664 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 TMEM186Q96B77 213 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 SPATA13Q96N96 652 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 PKP2Q99959 881 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 SPATA25Q9BR10 227 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 NUF2Q9BZD4 464 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 SPATC1LQ9H0A9 340 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 TMEM168Q9H0V1 697 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 FZD8Q9H461 694 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 MBNL3Q9NUK0 354 aaKnown RBP6.11□□□□□ -1.43
BRCA1-224ENST00000497488 ATAD3AQ9NVI7 634 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 TMOD2Q9NZR1 351 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 COX16Q9P0S2 106 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 FAM96BQ9Y3D0 163 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 C2CD2Q9Y426 696 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 MAU2Q9Y6X3 613 aa6.11□□□□□ -1.43
BRCA1-224ENST00000497488 ZNF518AQ6AHZ1 1483 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms