RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 SAP30LQ9HAJ7 183 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 PCDHB16Q9NRJ7 776 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 SNX15Q9NRS6 342 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 C20orf141Q9NUB4 165 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 INTS13Q9NVM9 706 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 ADPRHL2Q9NX46 363 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 FLRT1Q9NZU1 646 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 KIAA1456Q9P272 454 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 CRNNQ9UBG3 495 aaPredicted RBP2.54□□□□□ -2
CKS1BP2-201ENST00000497342 FBXL17Q9UF56 701 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 IL17BQ9UHF5 180 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 RAB21Q9UL25 225 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 MTUS1Q9ULD2 1270 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 FZD4Q9ULV1 537 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 A4GNTQ9UNA3 340 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 DTX4Q9Y2E6 619 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 NEUROG3Q9Y4Z2 214 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 ICE1Q9Y2F5 2266 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 LOC285556D6RIA3 1793 aa2.54□□□□□ -2
CKS1BP2-201ENST00000497342 UMODL1Q5DID0 1318 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 A0A1B0GVM2 712 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 KRTAP23-1A1A580 65 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 A1L4Q6 167 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 TMEM247A6NEH6 219 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 TSPY2A6NKD2 308 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 TTC36A6NLP5 189 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 ERVV-1B6SEH8 477 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 MCIDASD6RGH6 385 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 LEFTY2O00292 366 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 PSMA7O14818 248 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 SYN3O14994 580 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 NOBOXO60393 691 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 CCNT1O60563 726 aaKnown RBP2.53□□□□□ -2
CKS1BP2-201ENST00000497342 MITFO75030 526 aaPredicted RBP2.53□□□□□ -2
CKS1BP2-201ENST00000497342 RECQL4O94761 1208 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 UFL1O94874 794 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 LUC7L3O95232 432 aaKnown RBP2.53□□□□□ -2
CKS1BP2-201ENST00000497342 IPO7O95373 1038 aaKnown RBP2.53□□□□□ -2
CKS1BP2-201ENST00000497342 GDF11O95390 407 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 GPANK1O95872 356 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 MT-ND3P03897 115 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 CYP1A1P04798 512 aaPredicted RBP2.53□□□□□ -2
CKS1BP2-201ENST00000497342 ATP5BP06576 529 aaKnown RBP2.53□□□□□ -2
CKS1BP2-201ENST00000497342 TSPY3P0CV98 308 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 TSPY8P0CW00 308 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 ACTN1P12814 892 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 CYBAP13498 195 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 PKMP14618 531 aaKnown RBP2.53□□□□□ -2
CKS1BP2-201ENST00000497342 SAT1P21673 171 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 IL10P22301 178 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 GPTP24298 496 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 MCM3P25205 808 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 PON1P27169 355 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 ACADLP28330 430 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 MSX2P35548 267 aaPredicted RBP2.53□□□□□ -2
CKS1BP2-201ENST00000497342 PPARGP37231 505 aaPredicted RBP2.53□□□□□ -2
CKS1BP2-201ENST00000497342 CD86P42081 329 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 LMAN1P49257 510 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 ZNF84P51523 738 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 OAZ1P54368 228 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 RRP1P56182 461 aaKnown RBP2.53□□□□□ -2
CKS1BP2-201ENST00000497342 GPC5P78333 572 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 TSPY1Q01534 308 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 SP2Q02086 613 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 NHLH2Q02577 135 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 CFHR3Q02985 330 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 PPARDQ03181 441 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 CFHR1Q03591 330 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 ITIH3Q06033 890 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 HYAL1Q12794 435 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 SLC14A1Q13336 389 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 PRPF4BQ13523 1007 aaKnown RBP2.53□□□□□ -2
CKS1BP2-201ENST00000497342 TUBB2AQ13885 445 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 GRM7Q14831 915 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 RNPS1Q15287 305 aaKnown RBP2.53□□□□□ -2
CKS1BP2-201ENST00000497342 MED22Q15528 200 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 ELAVL1Q15717 326 aaKnown RBP2.53□□□□□ -2
CKS1BP2-201ENST00000497342 LY6KQ17RY6 165 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 ZNF528Q3MIS6 628 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 PLK5Q496M5 336 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 RUNDC3AQ59EK9 446 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 RARS2Q5T160 578 aaKnown RBP2.53□□□□□ -2
CKS1BP2-201ENST00000497342 UBAP2Q5T6F2 1119 aaKnown RBP2.53□□□□□ -2
CKS1BP2-201ENST00000497342 FAM171A1Q5VUB5 890 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 SLFN13Q68D06 897 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 MTFR2Q6P444 385 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 ZNF449Q6P9G9 518 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 IYDQ6PHW0 289 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 SLC30A10Q6XR72 485 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 MSANTD1Q6ZTZ1 278 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 MAVSQ7Z434 540 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 CAND1Q86VP6 1230 aaKnown RBP2.53□□□□□ -2
CKS1BP2-201ENST00000497342 CEP97Q8IW35 865 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 SFTPA1Q8IWL2 248 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 ZNF34Q8IZ26 560 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 TTC5Q8N0Z6 440 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 MMP21Q8N119 569 aa2.53□□□□□ -2
CKS1BP2-201ENST00000497342 CCAR2Q8N163 923 aaKnown RBP2.53□□□□□ -2
CKS1BP2-201ENST00000497342 C17orf53Q8N3J3 647 aaPredicted RBP2.53□□□□□ -2
CKS1BP2-201ENST00000497342 CPXM2Q8N436 756 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms