RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, human

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-210	ENST00000496840	AAR2	Q9Y312	384 aa	Known RBP	5.79	□□□□□ -1.48
TARDBP-210	ENST00000496840	LOXL2	Q9Y4K0	774 aa		5.79	□□□□□ -1.48
TARDBP-210	ENST00000496840	CYP46A1	Q9Y6A2	500 aa		5.79	□□□□□ -1.48
TARDBP-210	ENST00000496840	CEPT1	Q9Y6K0	416 aa		5.79	□□□□□ -1.48
TARDBP-210	ENST00000496840	LRRC53	A6NM62	1247 aa		5.78	□□□□□ -1.48
TARDBP-210	ENST00000496840	ITGA2	P17301	1181 aa		5.78	□□□□□ -1.48
TARDBP-210	ENST00000496840	MAPK9	P45984	424 aa		5.78	□□□□□ -1.48
TARDBP-210	ENST00000496840	PDE1B	Q01064	536 aa		5.78	□□□□□ -1.48
TARDBP-210	ENST00000496840	PQLC2	Q6ZP29	291 aa		5.78	□□□□□ -1.48
TARDBP-210	ENST00000496840	CADM4	Q8NFZ8	388 aa		5.78	□□□□□ -1.48
TARDBP-210	ENST00000496840	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		5.77	□□□□□ -1.49
TARDBP-210	ENST00000496840	FAM72C	H0Y354	149 aa		5.77	□□□□□ -1.49
TARDBP-210	ENST00000496840	XBP1	P17861	261 aa		5.77	□□□□□ -1.49
TARDBP-210	ENST00000496840	CORO1A	P31146	461 aa	Known RBP	5.77	□□□□□ -1.49
TARDBP-210	ENST00000496840	GNL1	P36915	607 aa	Predicted RBP	5.77	□□□□□ -1.49
TARDBP-210	ENST00000496840	FMO5	P49326	533 aa		5.77	□□□□□ -1.49
TARDBP-210	ENST00000496840	CLCN3	P51790	818 aa		5.77	□□□□□ -1.49
TARDBP-210	ENST00000496840	CSNK2A1	P68400	391 aa	Predicted RBP	5.77	□□□□□ -1.49
TARDBP-210	ENST00000496840	FGFBP1	Q14512	234 aa		5.77	□□□□□ -1.49
TARDBP-210	ENST00000496840	SLC9C2	Q5TAH2	1124 aa		5.77	□□□□□ -1.49
TARDBP-210	ENST00000496840	FAM72A	Q5TYM5	149 aa		5.77	□□□□□ -1.49
TARDBP-210	ENST00000496840	FAM72D	Q6L9T8	149 aa		5.77	□□□□□ -1.49
TARDBP-210	ENST00000496840	INO80C	Q6PI98	192 aa	Predicted RBP	5.77	□□□□□ -1.49
TARDBP-210	ENST00000496840	FAM72B	Q86X60	149 aa		5.77	□□□□□ -1.49
TARDBP-210	ENST00000496840	PCDH20	Q8N6Y1	951 aa	Known RBP	5.77	□□□□□ -1.49
TARDBP-210	ENST00000496840	CSNK2A3	Q8NEV1	391 aa		5.77	□□□□□ -1.49
TARDBP-210	ENST00000496840	LRRC8C	Q8TDW0	803 aa		5.77	□□□□□ -1.49
TARDBP-210	ENST00000496840	ST8SIA4	Q92187	359 aa		5.77	□□□□□ -1.49
TARDBP-210	ENST00000496840	SAAL1	Q96ER3	474 aa		5.77	□□□□□ -1.49
TARDBP-210	ENST00000496840	MTERF1	Q99551	399 aa	Known RBP	5.77	□□□□□ -1.49
TARDBP-210	ENST00000496840	CMKLR1	Q99788	373 aa		5.77	□□□□□ -1.49
TARDBP-210	ENST00000496840	LRRC1	Q9BTT6	524 aa		5.77	□□□□□ -1.49
TARDBP-210	ENST00000496840	PRKRIP1	Q9H875	184 aa	Predicted RBP	5.77	□□□□□ -1.49
TARDBP-210	ENST00000496840	ASAH2	Q9NR71	780 aa		5.77	□□□□□ -1.49
TARDBP-210	ENST00000496840	SLC6A13	Q9NSD5	602 aa		5.77	□□□□□ -1.49
TARDBP-210	ENST00000496840	TCF19	Q9Y242	345 aa		5.77	□□□□□ -1.49
TARDBP-210	ENST00000496840	CAPN9	O14815	690 aa		5.76	□□□□□ -1.49
TARDBP-210	ENST00000496840	SLC22A3	O75751	556 aa		5.76	□□□□□ -1.49
TARDBP-210	ENST00000496840	SEC31A	O94979	1220 aa	Known RBP	5.76	□□□□□ -1.49
TARDBP-210	ENST00000496840	MYOD1	P15172	320 aa		5.76	□□□□□ -1.49
TARDBP-210	ENST00000496840	EIF3B	P55884	814 aa	Known RBP	5.76	□□□□□ -1.49
TARDBP-210	ENST00000496840	EEF1A1	P68104	462 aa	Known RBP	5.76	□□□□□ -1.49
TARDBP-210	ENST00000496840	NEXN	Q0ZGT2	675 aa		5.76	□□□□□ -1.49
TARDBP-210	ENST00000496840	DRAP1	Q14919	205 aa	Predicted RBP	5.76	□□□□□ -1.49
TARDBP-210	ENST00000496840	ALG11	Q2TAA5	492 aa		5.76	□□□□□ -1.49
TARDBP-210	ENST00000496840	FAM69A	Q5T7M9	428 aa		5.76	□□□□□ -1.49
TARDBP-210	ENST00000496840	EEF1A1P5	Q5VTE0	462 aa		5.76	□□□□□ -1.49
TARDBP-210	ENST00000496840	ADAM5	Q6NVV9	412 aa		5.76	□□□□□ -1.49
TARDBP-210	ENST00000496840	DUS1L	Q6P1R4	473 aa	Known RBP	5.76	□□□□□ -1.49
TARDBP-210	ENST00000496840	BRAT1	Q6PJG6	821 aa		5.76	□□□□□ -1.49
TARDBP-210	ENST00000496840	HAPLN4	Q86UW8	402 aa		5.76	□□□□□ -1.49
TARDBP-210	ENST00000496840	DMBX1	Q8NFW5	382 aa		5.76	□□□□□ -1.49
TARDBP-210	ENST00000496840	NR1H4	Q96RI1	486 aa	Predicted RBP	5.76	□□□□□ -1.49
TARDBP-210	ENST00000496840	TMEM47	Q9BQJ4	181 aa		5.76	□□□□□ -1.49
TARDBP-210	ENST00000496840	SYT17	Q9BSW7	474 aa		5.76	□□□□□ -1.49
TARDBP-210	ENST00000496840	PDP2	Q9P2J9	529 aa		5.76	□□□□□ -1.49
TARDBP-210	ENST00000496840	ERVV-2	B6SEH9	535 aa		5.75	□□□□□ -1.49
TARDBP-210	ENST00000496840	NTN3	O00634	580 aa	Predicted RBP	5.75	□□□□□ -1.49
TARDBP-210	ENST00000496840	TPD52L2	O43399	206 aa	Known RBP	5.75	□□□□□ -1.49
TARDBP-210	ENST00000496840	ABCD3	P28288	659 aa		5.75	□□□□□ -1.49
TARDBP-210	ENST00000496840	TIMP3	P35625	211 aa		5.75	□□□□□ -1.49
TARDBP-210	ENST00000496840	CDKN1A	P38936	164 aa		5.75	□□□□□ -1.49
TARDBP-210	ENST00000496840	FOXM1	Q08050	763 aa		5.75	□□□□□ -1.49
TARDBP-210	ENST00000496840	ZNF234	Q14588	700 aa		5.75	□□□□□ -1.49
TARDBP-210	ENST00000496840	TMEM95	Q3KNT9	176 aa		5.75	□□□□□ -1.49
TARDBP-210	ENST00000496840	GPATCH4	Q5T3I0	446 aa	Known RBP	5.75	□□□□□ -1.49
TARDBP-210	ENST00000496840	SIGIRR	Q6IA17	410 aa		5.75	□□□□□ -1.49
TARDBP-210	ENST00000496840	ASB18	Q6ZVZ8	466 aa		5.75	□□□□□ -1.49
TARDBP-210	ENST00000496840	CACNA2D4	Q7Z3S7	1137 aa		5.75	□□□□□ -1.49
TARDBP-210	ENST00000496840	PIGT	Q969N2	578 aa		5.75	□□□□□ -1.49
TARDBP-210	ENST00000496840	DUX3	Q96PT4	197 aa		5.75	□□□□□ -1.49
TARDBP-210	ENST00000496840	LTB4R2	Q9NPC1	389 aa		5.75	□□□□□ -1.49
TARDBP-210	ENST00000496840	HAO1	Q9UJM8	370 aa		5.75	□□□□□ -1.49
TARDBP-210	ENST00000496840	DLGAP4	Q9Y2H0	992 aa		5.75	□□□□□ -1.49
TARDBP-210	ENST00000496840	KDM3A	Q9Y4C1	1321 aa		5.74	□□□□□ -1.49
TARDBP-210	ENST00000496840	SPINT2	O43291	252 aa		5.74	□□□□□ -1.49
TARDBP-210	ENST00000496840	COL28A1	Q2UY09	1125 aa		5.74	□□□□□ -1.49
TARDBP-210	ENST00000496840	SMAP1	Q8IYB5	467 aa	Predicted RBP	5.74	□□□□□ -1.49
TARDBP-210	ENST00000496840	THAP6	Q8TBB0	222 aa		5.74	□□□□□ -1.49
TARDBP-210	ENST00000496840	ORAI1	Q96D31	301 aa		5.74	□□□□□ -1.49
TARDBP-210	ENST00000496840	QRFPR	Q96P65	431 aa		5.74	□□□□□ -1.49
TARDBP-210	ENST00000496840	SLC25A18	Q9H1K4	315 aa		5.74	□□□□□ -1.49
TARDBP-210	ENST00000496840	TAAR2	Q9P1P5	351 aa		5.74	□□□□□ -1.49
TARDBP-210	ENST00000496840	GAB2	Q9UQC2	676 aa		5.74	□□□□□ -1.49
TARDBP-210	ENST00000496840	OR2W1	Q9Y3N9	320 aa		5.74	□□□□□ -1.49
TARDBP-210	ENST00000496840	VCY	O14598	125 aa		5.73	□□□□□ -1.49
TARDBP-210	ENST00000496840	WDR1	O75083	606 aa		5.73	□□□□□ -1.49
TARDBP-210	ENST00000496840	EIF3J	O75822	258 aa	Known RBP	5.73	□□□□□ -1.49
TARDBP-210	ENST00000496840	PAK4	O96013	591 aa	Predicted RBP	5.73	□□□□□ -1.49
TARDBP-210	ENST00000496840	EGF	P01133	1207 aa		5.73	□□□□□ -1.49
TARDBP-210	ENST00000496840	PYGL	P06737	847 aa		5.73	□□□□□ -1.49
TARDBP-210	ENST00000496840	CTCF	P49711	727 aa	Predicted RBP	5.73	□□□□□ -1.49
TARDBP-210	ENST00000496840	CRIP2	P52943	208 aa	Predicted RBP	5.73	□□□□□ -1.49
TARDBP-210	ENST00000496840	OLIG2	Q13516	323 aa		5.73	□□□□□ -1.49
TARDBP-210	ENST00000496840	GTF2H2	Q13888	395 aa		5.73	□□□□□ -1.49
TARDBP-210	ENST00000496840	DECR1	Q16698	335 aa		5.73	□□□□□ -1.49
TARDBP-210	ENST00000496840	KIF26B	Q2KJY2	2108 aa		5.73	□□□□□ -1.49
TARDBP-210	ENST00000496840	PLA2G4F	Q68DD2	849 aa		5.73	□□□□□ -1.49
TARDBP-210	ENST00000496840	ZNF280D	Q6N043	979 aa		5.73	□□□□□ -1.49
TARDBP-210	ENST00000496840	GTF2H2C	Q6P1K8	395 aa		5.73	□□□□□ -1.49

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