RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 GPR26Q8NDV2 337 aa21.69■■□□□ 1.06
C9orf3-222ENST00000496567 CENPTQ96BT3 561 aa21.69■■□□□ 1.06
C9orf3-222ENST00000496567 AP2M1Q96CW1 435 aa21.69■■□□□ 1.06
C9orf3-222ENST00000496567 ZNF778Q96MU6 729 aa21.69■■□□□ 1.06
C9orf3-222ENST00000496567 ABCG8Q9H221 673 aa21.69■■□□□ 1.06
C9orf3-222ENST00000496567 KCNH6Q9H252 994 aa21.69■■□□□ 1.06
C9orf3-222ENST00000496567 SAYSD1Q9NPB0 183 aa21.69■■□□□ 1.06
C9orf3-222ENST00000496567 APPL1Q9UKG1 709 aa21.69■■□□□ 1.06
C9orf3-222ENST00000496567 CEP192Q8TEP8 1941 aa21.68■■□□□ 1.06
C9orf3-222ENST00000496567 CCDC78A2IDD5 438 aa21.68■■□□□ 1.06
C9orf3-222ENST00000496567 H7C0S8 307 aa21.68■■□□□ 1.06
C9orf3-222ENST00000496567 PYGLP06737 847 aa21.68■■□□□ 1.06
C9orf3-222ENST00000496567 POLBP06746 335 aa21.68■■□□□ 1.06
C9orf3-222ENST00000496567 DHPSP49366 369 aaPredicted RBP21.68■■□□□ 1.06
C9orf3-222ENST00000496567 TMPRSS15P98073 1019 aa21.68■■□□□ 1.06
C9orf3-222ENST00000496567 ACVR1Q04771 509 aa21.68■■□□□ 1.06
C9orf3-222ENST00000496567 WSCD2Q2TBF2 565 aa21.68■■□□□ 1.06
C9orf3-222ENST00000496567 TMEM135Q86UB9 458 aa21.68■■□□□ 1.06
C9orf3-222ENST00000496567 TP53I13Q8NBR0 393 aaPredicted RBP21.68■■□□□ 1.06
C9orf3-222ENST00000496567 PRSS33Q8NF86 280 aa21.68■■□□□ 1.06
C9orf3-222ENST00000496567 DTX3LQ8TDB6 740 aa21.68■■□□□ 1.06
C9orf3-222ENST00000496567 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.68■■□□□ 1.062e-7■■■■■ 48.8
C9orf3-222ENST00000496567 DNASE2BQ8WZ79 361 aa21.68■■□□□ 1.06
C9orf3-222ENST00000496567 EBF2Q9HAK2 575 aa21.68■■□□□ 1.06
C9orf3-222ENST00000496567 TREX1Q9NSU2 369 aa21.68■■□□□ 1.06
C9orf3-222ENST00000496567 ZC3H7BQ9UGR2 993 aaKnown RBP21.68■■□□□ 1.06
C9orf3-222ENST00000496567 CHMP2BQ9UQN3 213 aa21.68■■□□□ 1.06
C9orf3-222ENST00000496567 RPS6KL1Q9Y6S9 549 aa21.68■■□□□ 1.06
C9orf3-222ENST00000496567 ABCA7Q8IZY2 2146 aa21.68■■□□□ 1.06
C9orf3-222ENST00000496567 THADAQ6YHU6 1953 aa21.67■■□□□ 1.06
C9orf3-222ENST00000496567 SCN8AQ9UQD0 1980 aa21.67■■□□□ 1.06
C9orf3-222ENST00000496567 GLYATL1P3A0A0U1RQE8 302 aa21.67■■□□□ 1.06
C9orf3-222ENST00000496567 USP1O94782 785 aa21.67■■□□□ 1.06
C9orf3-222ENST00000496567 TUBBP07437 444 aa21.67■■□□□ 1.06
C9orf3-222ENST00000496567 PAMP19021 973 aa21.67■■□□□ 1.06
C9orf3-222ENST00000496567 NMBRP28336 390 aa21.67■■□□□ 1.06
C9orf3-222ENST00000496567 PTGER3P43115 390 aa21.67■■□□□ 1.06
C9orf3-222ENST00000496567 ANKRD20A4Q4UJ75 823 aa21.67■■□□□ 1.06
C9orf3-222ENST00000496567 HP1BP3Q5SSJ5 553 aaPredicted RBP21.67■■□□□ 1.06
C9orf3-222ENST00000496567 HENMT1Q5T8I9 393 aaKnown RBP21.67■■□□□ 1.06
C9orf3-222ENST00000496567 LYSMD4Q5XG99 296 aa21.67■■□□□ 1.06
C9orf3-222ENST00000496567 ALS2CLQ60I27 953 aa21.67■■□□□ 1.06
C9orf3-222ENST00000496567 ESRP1Q6NXG1 681 aaKnown RBP21.67■■□□□ 1.06
C9orf3-222ENST00000496567 PRR23BQ6ZRT6 265 aa21.67■■□□□ 1.06
C9orf3-222ENST00000496567 RGL4Q8IZJ4 473 aa21.67■■□□□ 1.06
C9orf3-222ENST00000496567 FBXO36Q8NEA4 188 aa21.67■■□□□ 1.06
C9orf3-222ENST00000496567 OR13J1Q8NGT2 312 aa21.67■■□□□ 1.06
C9orf3-222ENST00000496567 PYROXD1Q8WU10 500 aa21.67■■□□□ 1.06
C9orf3-222ENST00000496567 SCAMP4Q969E2 229 aa21.67■■□□□ 1.06
C9orf3-222ENST00000496567 MFSD3Q96ES6 412 aa21.67■■□□□ 1.06
C9orf3-222ENST00000496567 CDKN2AIPNLQ96HQ2 116 aa21.67■■□□□ 1.06
C9orf3-222ENST00000496567 SERAC1Q96JX3 654 aa21.67■■□□□ 1.06
C9orf3-222ENST00000496567 KLF6Q99612 283 aaPredicted RBP21.67■■□□□ 1.06
C9orf3-222ENST00000496567 ZSCAN5AQ9BUG6 496 aa21.67■■□□□ 1.06
C9orf3-222ENST00000496567 RIOK2Q9BVS4 552 aaKnown RBP21.67■■□□□ 1.06
C9orf3-222ENST00000496567 IL26Q9NPH9 171 aa21.67■■□□□ 1.06
C9orf3-222ENST00000496567 SLC2A6Q9UGQ3 507 aa21.67■■□□□ 1.06
C9orf3-222ENST00000496567 EIF2B4Q9UI10 523 aaKnown RBP21.67■■□□□ 1.06
C9orf3-222ENST00000496567 FKBPLQ9UIM3 349 aa21.67■■□□□ 1.06
C9orf3-222ENST00000496567 FNDC3AQ9Y2H6 1198 aaKnown RBP21.67■■□□□ 1.06
C9orf3-222ENST00000496567 HS3ST3A1Q9Y663 406 aa21.67■■□□□ 1.06
C9orf3-222ENST00000496567 FPGTO14772 594 aa21.66■■□□□ 1.06
C9orf3-222ENST00000496567 TSHRP16473 764 aa21.66■■□□□ 1.06
C9orf3-222ENST00000496567 PRAMEP78395 509 aa21.66■■□□□ 1.06
C9orf3-222ENST00000496567 TCF15Q12870 199 aa21.66■■□□□ 1.06
C9orf3-222ENST00000496567 IRF4Q15306 451 aa21.66■■□□□ 1.06
C9orf3-222ENST00000496567 WDR93Q6P2C0 686 aa21.66■■□□□ 1.06
C9orf3-222ENST00000496567 ARMCX6Q7L4S7 300 aa21.66■■□□□ 1.06
C9orf3-222ENST00000496567 ANKMY2Q8IV38 441 aa21.66■■□□□ 1.06
C9orf3-222ENST00000496567 TRAM1L1Q8N609 369 aa21.66■■□□□ 1.06
C9orf3-222ENST00000496567 ZNF669Q96BR6 464 aaPredicted RBP21.66■■□□□ 1.06
C9orf3-222ENST00000496567 SPATA16Q9BXB7 569 aa21.66■■□□□ 1.06
C9orf3-222ENST00000496567 FZD3Q9NPG1 666 aa21.66■■□□□ 1.06
C9orf3-222ENST00000496567 R4GN57 208 aa21.66■■□□□ 1.06
C9orf3-222ENST00000496567 RAD51BO15315 384 aa21.65■■□□□ 1.06
C9orf3-222ENST00000496567 MAGEA4P43358 317 aa21.65■■□□□ 1.06
C9orf3-222ENST00000496567 GPR1P46091 355 aa21.65■■□□□ 1.06
C9orf3-222ENST00000496567 ITGA9Q13797 1035 aa21.65■■□□□ 1.06
C9orf3-222ENST00000496567 STAT4Q14765 748 aa21.65■■□□□ 1.06
C9orf3-222ENST00000496567 FASTKD3Q14CZ7 662 aaKnown RBP21.65■■□□□ 1.06
C9orf3-222ENST00000496567 SPANXN3Q5MJ09 141 aa21.65■■□□□ 1.06
C9orf3-222ENST00000496567 PDPK2PQ6A1A2 396 aa21.65■■□□□ 1.06
C9orf3-222ENST00000496567 RAET1GQ6H3X3 334 aa21.65■■□□□ 1.06
C9orf3-222ENST00000496567 PNCKQ6P2M8 343 aa21.65■■□□□ 1.06
C9orf3-222ENST00000496567 CES3Q6UWW8 571 aa21.65■■□□□ 1.06
C9orf3-222ENST00000496567 FAM151BQ6UXP7 276 aa21.65■■□□□ 1.06
C9orf3-222ENST00000496567 CCNI2Q6ZMN8 369 aaPredicted RBP21.65■■□□□ 1.06
C9orf3-222ENST00000496567 IGDCC3Q8IVU1 814 aa21.65■■□□□ 1.06
C9orf3-222ENST00000496567 FAM174AQ8TBP5 190 aa21.65■■□□□ 1.06
C9orf3-222ENST00000496567 HDAC10Q969S8 669 aa21.65■■□□□ 1.06
C9orf3-222ENST00000496567 TBATAQ96M53 351 aa21.65■■□□□ 1.06
C9orf3-222ENST00000496567 MYOCQ99972 504 aa21.65■■□□□ 1.06
C9orf3-222ENST00000496567 ORAI3Q9BRQ5 295 aa21.65■■□□□ 1.06
C9orf3-222ENST00000496567 MBNL1Q9NR56 388 aaKnown RBP21.65■■□□□ 1.06
C9orf3-222ENST00000496567 SLC30A1Q9Y6M5 507 aa21.65■■□□□ 1.06
C9orf3-222ENST00000496567 DOCK9Q9BZ29 2069 aa21.65■■□□□ 1.06
C9orf3-222ENST00000496567 FANCMQ8IYD8 2048 aa21.65■■□□□ 1.06
C9orf3-222ENST00000496567 PCCBP05166 539 aa21.65■■□□□ 1.06
C9orf3-222ENST00000496567 TEAD1P28347 426 aa21.65■■□□□ 1.06
C9orf3-222ENST00000496567 DPP6P42658 865 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms