RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 TECPR1Q7Z6L1 1165 aa16.33■□□□□ 0.2
SF3A1-209ENST00000496189 NLRP8Q86W28 1048 aa16.33■□□□□ 0.2
SF3A1-209ENST00000496189 CBARPQ8N350 705 aaPredicted RBP16.33■□□□□ 0.2
SF3A1-209ENST00000496189 IPMKQ8NFU5 416 aa16.33■□□□□ 0.2
SF3A1-209ENST00000496189 SLC35B2Q8TB61 432 aa16.33■□□□□ 0.2
SF3A1-209ENST00000496189 FAM83DQ9H4H8 585 aa16.33■□□□□ 0.2
SF3A1-209ENST00000496189 TRABDQ9H4I3 376 aa16.33■□□□□ 0.2
SF3A1-209ENST00000496189 HACD3Q9P035 362 aa16.33■□□□□ 0.2
SF3A1-209ENST00000496189 SNX12Q9UMY4 172 aa16.33■□□□□ 0.2
SF3A1-209ENST00000496189 PCDHGA1Q9Y5H4 931 aa16.33■□□□□ 0.2
SF3A1-209ENST00000496189 F5H423 210 aaPredicted RBP16.32■□□□□ 0.2
SF3A1-209ENST00000496189 CES2O00748 559 aa16.32■□□□□ 0.2
SF3A1-209ENST00000496189 TPP1O14773 563 aa16.32■□□□□ 0.2
SF3A1-209ENST00000496189 GM2AP17900 193 aa16.32■□□□□ 0.2
SF3A1-209ENST00000496189 CD68P34810 354 aaPredicted RBP16.32■□□□□ 0.2
SF3A1-209ENST00000496189 ILKQ13418 452 aa16.32■□□□□ 0.2
SF3A1-209ENST00000496189 PEX6Q13608 980 aa16.32■□□□□ 0.2
SF3A1-209ENST00000496189 IHHQ14623 411 aa16.32■□□□□ 0.2
SF3A1-209ENST00000496189 PTPRRQ15256 657 aa16.32■□□□□ 0.2
SF3A1-209ENST00000496189 CCNG2Q16589 344 aa16.32■□□□□ 0.2
SF3A1-209ENST00000496189 ALG11Q2TAA5 492 aa16.32■□□□□ 0.2
SF3A1-209ENST00000496189 LYSMD3Q7Z3D4 306 aa16.32■□□□□ 0.2
SF3A1-209ENST00000496189 RBFAQ8N0V3 343 aa16.32■□□□□ 0.2
SF3A1-209ENST00000496189 GALNT15Q8N3T1 639 aa16.32■□□□□ 0.2
SF3A1-209ENST00000496189 PNPLA1Q8N8W4 532 aa16.32■□□□□ 0.2
SF3A1-209ENST00000496189 ADAMTS14Q8WXS8 1223 aa16.32■□□□□ 0.2
SF3A1-209ENST00000496189 TSACCQ96A04 125 aaPredicted RBP16.32■□□□□ 0.2
SF3A1-209ENST00000496189 TADA1Q96BN2 335 aa16.32■□□□□ 0.2
SF3A1-209ENST00000496189 SPATA13Q96N96 652 aa16.32■□□□□ 0.2
SF3A1-209ENST00000496189 TRIB3Q96RU7 358 aa16.32■□□□□ 0.2
SF3A1-209ENST00000496189 OSBPL9Q96SU4 736 aa16.32■□□□□ 0.2
SF3A1-209ENST00000496189 NAPGQ99747 312 aaPredicted RBP16.32■□□□□ 0.2
SF3A1-209ENST00000496189 TEX101Q9BY14 249 aa16.32■□□□□ 0.2
SF3A1-209ENST00000496189 ABCG8Q9H221 673 aa16.32■□□□□ 0.2
SF3A1-209ENST00000496189 TTC7AQ9ULT0 858 aaPredicted RBP16.32■□□□□ 0.2
SF3A1-209ENST00000496189 ZNF148Q9UQR1 794 aa16.32■□□□□ 0.2
SF3A1-209ENST00000496189 R3HDM2Q9Y2K5 976 aaKnown RBP16.32■□□□□ 0.2
SF3A1-209ENST00000496189 ZNF711Q9Y462 761 aa16.32■□□□□ 0.2
SF3A1-209ENST00000496189 DGKBQ9Y6T7 804 aa16.32■□□□□ 0.2
SF3A1-209ENST00000496189 PCNX2A6NKB5 2137 aa16.31■□□□□ 0.2
SF3A1-209ENST00000496189 PRSS38A1L453 326 aa16.31■□□□□ 0.2
SF3A1-209ENST00000496189 C5orf60A6NFR6 353 aa16.31■□□□□ 0.2
SF3A1-209ENST00000496189 LMO7DNF2Z398 122 aa16.31■□□□□ 0.2
SF3A1-209ENST00000496189 K7ESM1 405 aa16.31■□□□□ 0.2
SF3A1-209ENST00000496189 TRIM38O00635 465 aa16.31■□□□□ 0.2
SF3A1-209ENST00000496189 LIASO43766 372 aa16.31■□□□□ 0.2
SF3A1-209ENST00000496189 FGF1P05230 155 aa16.31■□□□□ 0.2
SF3A1-209ENST00000496189 SPINT3P49223 89 aa16.31■□□□□ 0.2
SF3A1-209ENST00000496189 SHC2P98077 582 aa16.31■□□□□ 0.2
SF3A1-209ENST00000496189 CDK3Q00526 305 aa16.31■□□□□ 0.2
SF3A1-209ENST00000496189 C1orf61Q13536 156 aa16.31■□□□□ 0.2
SF3A1-209ENST00000496189 DEFB133Q30KQ1 61 aa16.31■□□□□ 0.2
SF3A1-209ENST00000496189 P3H1Q32P28 736 aa16.31■□□□□ 0.2
SF3A1-209ENST00000496189 LVRNQ6Q4G3 990 aa16.31■□□□□ 0.2
SF3A1-209ENST00000496189 ADAMTSL4Q6UY14 1074 aa16.31■□□□□ 0.2
SF3A1-209ENST00000496189 RASGEF1CQ8N431 466 aa16.31■□□□□ 0.2
SF3A1-209ENST00000496189 SLC25A41Q8N5S1 370 aa16.31■□□□□ 0.2
SF3A1-209ENST00000496189 FAM71DQ8N9W8 422 aa16.31■□□□□ 0.2
SF3A1-209ENST00000496189 C1orf54Q8WWF1 131 aa16.31■□□□□ 0.2
SF3A1-209ENST00000496189 ATG4AQ8WYN0 398 aa16.31■□□□□ 0.2
SF3A1-209ENST00000496189 SCAMP4Q969E2 229 aa16.31■□□□□ 0.2
SF3A1-209ENST00000496189 HIC2Q96JB3 615 aa16.31■□□□□ 0.2
SF3A1-209ENST00000496189 LRRC61Q9BV99 259 aa16.31■□□□□ 0.2
SF3A1-209ENST00000496189 RIOK2Q9BVS4 552 aaKnown RBP16.31■□□□□ 0.2
SF3A1-209ENST00000496189 SCNM1Q9BWG6 230 aa16.31■□□□□ 0.2
SF3A1-209ENST00000496189 C10orf88Q9H8K7 445 aa16.31■□□□□ 0.2
SF3A1-209ENST00000496189 CYP4F12Q9HCS2 524 aa16.31■□□□□ 0.2
SF3A1-209ENST00000496189 KLF15Q9UIH9 416 aa16.31■□□□□ 0.2
SF3A1-209ENST00000496189 SHOC2Q9UQ13 582 aa16.31■□□□□ 0.2
SF3A1-209ENST00000496189 A0A0U1RQS6 177 aa16.3■□□□□ 0.2
SF3A1-209ENST00000496189 LOC285095A0A1B0GVY8 99 aa16.3■□□□□ 0.2
SF3A1-209ENST00000496189 TMEM202A6NGA9 273 aa16.3■□□□□ 0.2
SF3A1-209ENST00000496189 PGRMC1O00264 195 aaKnown RBP16.3■□□□□ 0.2
SF3A1-209ENST00000496189 HYAL3O43820 417 aaPredicted RBP16.3■□□□□ 0.2
SF3A1-209ENST00000496189 ASMTLO95671 621 aa16.3■□□□□ 0.2
SF3A1-209ENST00000496189 PIRTP0C851 137 aa16.3■□□□□ 0.2
SF3A1-209ENST00000496189 E2F1Q01094 437 aa16.3■□□□□ 0.2
SF3A1-209ENST00000496189 ILF3Q12906 894 aaKnown RBP eCLIP16.3■□□□□ 0.2
SF3A1-209ENST00000496189 DNAJC3Q13217 504 aa16.3■□□□□ 0.2
SF3A1-209ENST00000496189 SLC1A5Q15758 541 aa16.3■□□□□ 0.2
SF3A1-209ENST00000496189 PROX2Q3B8N5 592 aa16.3■□□□□ 0.2
SF3A1-209ENST00000496189 ZDHHC20Q5W0Z9 365 aa16.3■□□□□ 0.2
SF3A1-209ENST00000496189 DRICH1Q6PGQ1 229 aaPredicted RBP16.3■□□□□ 0.2
SF3A1-209ENST00000496189 DOK6Q6PKX4 331 aa16.3■□□□□ 0.2
SF3A1-209ENST00000496189 KDELC1Q6UW63 502 aa16.3■□□□□ 0.2
SF3A1-209ENST00000496189 GLT6D1Q7Z4J2 308 aa16.3■□□□□ 0.2
SF3A1-209ENST00000496189 RAB44Q7Z6P3 723 aaPredicted RBP16.3■□□□□ 0.2
SF3A1-209ENST00000496189 SLCO6A1Q86UG4 719 aa16.3■□□□□ 0.2
SF3A1-209ENST00000496189 CHCHD4Q8N4Q1 142 aa16.3■□□□□ 0.2
SF3A1-209ENST00000496189 FAM181AQ8N9Y4 354 aa16.3■□□□□ 0.2
SF3A1-209ENST00000496189 ACTRT1Q8TDG2 376 aa16.3■□□□□ 0.2
SF3A1-209ENST00000496189 PDXPQ96GD0 296 aa16.3■□□□□ 0.2
SF3A1-209ENST00000496189 MRGPRX2Q96LB1 330 aa16.3■□□□□ 0.2
SF3A1-209ENST00000496189 APOLD1Q96LR9 279 aa16.3■□□□□ 0.2
SF3A1-209ENST00000496189 SMIM14Q96QK8 99 aa16.3■□□□□ 0.2
SF3A1-209ENST00000496189 TMEM121Q9BTD3 319 aa16.3■□□□□ 0.2
SF3A1-209ENST00000496189 ZSCAN5AQ9BUG6 496 aa16.3■□□□□ 0.2
SF3A1-209ENST00000496189 SPATA16Q9BXB7 569 aa16.3■□□□□ 0.2
SF3A1-209ENST00000496189 TCEAL2Q9H3H9 227 aaPredicted RBP16.3■□□□□ 0.2
SF3A1-209ENST00000496189 CARS2Q9HA77 564 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms