RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 SDCCAG8Q86SQ7 713 aaPredicted RBP16.27■□□□□ 0.2
CBX4-204ENST00000495122 RALGPS2Q86X27 583 aaPredicted RBP16.27■□□□□ 0.2
CBX4-204ENST00000495122 CARNMT1Q8N4J0 409 aa16.27■□□□□ 0.2
CBX4-204ENST00000495122 CELF5Q8N6W0 485 aaKnown RBP16.27■□□□□ 0.2
CBX4-204ENST00000495122 MAB21L3Q8N8X9 362 aa16.27■□□□□ 0.2
CBX4-204ENST00000495122 OR52K2Q8NGK3 314 aa16.27■□□□□ 0.2
CBX4-204ENST00000495122 FAM45AQ8TCE6 357 aa16.27■□□□□ 0.2
CBX4-204ENST00000495122 INPP5DQ92835 1189 aa16.27■□□□□ 0.2
CBX4-204ENST00000495122 CCDC126Q96EE4 140 aa16.27■□□□□ 0.2
CBX4-204ENST00000495122 FEM1AQ9BSK4 669 aa16.27■□□□□ 0.2
CBX4-204ENST00000495122 MECRQ9BV79 373 aa16.27■□□□□ 0.2
CBX4-204ENST00000495122 FAM126AQ9BYI3 521 aaPredicted RBP16.27■□□□□ 0.2
CBX4-204ENST00000495122 NOD2Q9HC29 1040 aa16.27■□□□□ 0.2
CBX4-204ENST00000495122 INTS10Q9NVR2 710 aaKnown RBP16.27■□□□□ 0.2
CBX4-204ENST00000495122 NLE1Q9NVX2 485 aaPredicted RBP16.27■□□□□ 0.2
CBX4-204ENST00000495122 SMPD4Q9NXE4 827 aa16.27■□□□□ 0.2
CBX4-204ENST00000495122 PLXND1Q9Y4D7 1925 aa16.26■□□□□ 0.19
CBX4-204ENST00000495122 C2orf81A6NN90 581 aa16.26■□□□□ 0.19
CBX4-204ENST00000495122 TRAFD1O14545 582 aaPredicted RBP16.26■□□□□ 0.19
CBX4-204ENST00000495122 TSPAN3O60637 253 aa16.26■□□□□ 0.19
CBX4-204ENST00000495122 TRIM13O60858 407 aa16.26■□□□□ 0.19
CBX4-204ENST00000495122 TMCC1O94876 653 aa16.26■□□□□ 0.19
CBX4-204ENST00000495122 SLC35E2BP0CK96 405 aa16.26■□□□□ 0.19
CBX4-204ENST00000495122 MYL2P10916 166 aa16.26■□□□□ 0.19
CBX4-204ENST00000495122 ALOX15P16050 662 aaPredicted RBP16.26■□□□□ 0.19
CBX4-204ENST00000495122 SLC1A6P48664 564 aa16.26■□□□□ 0.19
CBX4-204ENST00000495122 CCR3P51677 355 aa16.26■□□□□ 0.19
CBX4-204ENST00000495122 ARF5P84085 180 aa16.26■□□□□ 0.19
CBX4-204ENST00000495122 LRRC32Q14392 662 aa16.26■□□□□ 0.19
CBX4-204ENST00000495122 GAS6Q14393 721 aa16.26■□□□□ 0.19
CBX4-204ENST00000495122 IHHQ14623 411 aa16.26■□□□□ 0.19
CBX4-204ENST00000495122 PPM1JQ5JR12 505 aa16.26■□□□□ 0.19
CBX4-204ENST00000495122 AFTPHQ6ULP2 937 aa16.26■□□□□ 0.19
CBX4-204ENST00000495122 TBC1D1Q86TI0 1168 aaPredicted RBP16.26■□□□□ 0.19
CBX4-204ENST00000495122 DENND6AQ8IWF6 608 aa16.26■□□□□ 0.19
CBX4-204ENST00000495122 C10orf67Q8IYJ2 551 aa16.26■□□□□ 0.19
CBX4-204ENST00000495122 FIBINQ8TAL6 211 aa16.26■□□□□ 0.19
CBX4-204ENST00000495122 TTC8Q8TAM2 541 aa16.26■□□□□ 0.19
CBX4-204ENST00000495122 RIN3Q8TB24 985 aa16.26■□□□□ 0.19
CBX4-204ENST00000495122 PIWIL2Q8TC59 973 aaKnown RBP16.26■□□□□ 0.19
CBX4-204ENST00000495122 WBP2Q969T9 261 aa16.26■□□□□ 0.19
CBX4-204ENST00000495122 ERP27Q96DN0 273 aa16.26■□□□□ 0.19
CBX4-204ENST00000495122 ALG14Q96F25 216 aa16.26■□□□□ 0.19
CBX4-204ENST00000495122 ELMO2Q96JJ3 720 aa16.26■□□□□ 0.19
CBX4-204ENST00000495122 MRPL57Q9BQC6 102 aaKnown RBP16.26■□□□□ 0.19
CBX4-204ENST00000495122 TMEM120AQ9BXJ8 343 aa16.26■□□□□ 0.19
CBX4-204ENST00000495122 MYLK2Q9H1R3 596 aa16.26■□□□□ 0.19
CBX4-204ENST00000495122 ECT2Q9H8V3 914 aa16.26■□□□□ 0.19
CBX4-204ENST00000495122 KIAA1522Q9P206 1035 aaPredicted RBP16.26■□□□□ 0.19
CBX4-204ENST00000495122 ZFP69BQ9UJL9 534 aa16.26■□□□□ 0.19
CBX4-204ENST00000495122 VPS28Q9UK41 221 aa16.26■□□□□ 0.19
CBX4-204ENST00000495122 CCL26Q9Y258 94 aa16.26■□□□□ 0.19
CBX4-204ENST00000495122 ANKRD65E5RJM6 399 aa16.25■□□□□ 0.19
CBX4-204ENST00000495122 CCDC22O60826 627 aa16.25■□□□□ 0.19
CBX4-204ENST00000495122 AVPR1AP37288 418 aa16.25■□□□□ 0.19
CBX4-204ENST00000495122 SCNN1BP51168 640 aa16.25■□□□□ 0.19
CBX4-204ENST00000495122 ZNF140P52738 457 aaPredicted RBP16.25■□□□□ 0.19
CBX4-204ENST00000495122 ABCE1P61221 599 aaKnown RBP16.25■□□□□ 0.19
CBX4-204ENST00000495122 NCALDP61601 193 aa16.25■□□□□ 0.19
CBX4-204ENST00000495122 MPP1Q00013 466 aa16.25■□□□□ 0.19
CBX4-204ENST00000495122 CTBP1Q13363 440 aa16.25■□□□□ 0.19
CBX4-204ENST00000495122 KRT72Q14CN4 511 aa16.25■□□□□ 0.19
CBX4-204ENST00000495122 FAM83EQ2M2I3 478 aa16.25■□□□□ 0.19
CBX4-204ENST00000495122 TYSND1Q2T9J0 566 aa16.25■□□□□ 0.19
CBX4-204ENST00000495122 AGAP9Q5VTM2 703 aa16.25■□□□□ 0.19
CBX4-204ENST00000495122 C16orf46Q6P387 395 aa16.25■□□□□ 0.19
CBX4-204ENST00000495122 KLC3Q6P597 504 aa16.25■□□□□ 0.19
CBX4-204ENST00000495122 NCEH1Q6PIU2 408 aa16.25■□□□□ 0.19
CBX4-204ENST00000495122 KDELC2Q7Z4H8 507 aa16.25■□□□□ 0.19
CBX4-204ENST00000495122 C10orf107Q8IVU9 208 aa16.25■□□□□ 0.19
CBX4-204ENST00000495122 MFN1Q8IWA4 741 aa16.25■□□□□ 0.19
CBX4-204ENST00000495122 RFWD2Q8NHY2 731 aa16.25■□□□□ 0.19
CBX4-204ENST00000495122 PDCD6IPQ8WUM4 868 aaKnown RBP16.25■□□□□ 0.19
CBX4-204ENST00000495122 HDAC10Q969S8 669 aa16.25■□□□□ 0.19
CBX4-204ENST00000495122 SKA1Q96BD8 255 aa16.25■□□□□ 0.19
CBX4-204ENST00000495122 ATXN7L3BQ96GX2 97 aa16.25■□□□□ 0.19
CBX4-204ENST00000495122 SLC22A12Q96S37 553 aa16.25■□□□□ 0.19
CBX4-204ENST00000495122 MRPL46Q9H2W6 279 aaKnown RBP16.25■□□□□ 0.19
CBX4-204ENST00000495122 CAB39LQ9H9S4 337 aa16.25■□□□□ 0.19
CBX4-204ENST00000495122 KCNK13Q9HB14 408 aa16.25■□□□□ 0.19
CBX4-204ENST00000495122 OXSMQ9NWU1 459 aa16.25■□□□□ 0.19
CBX4-204ENST00000495122 CFAP97Q9P2B7 532 aa16.25■□□□□ 0.19
CBX4-204ENST00000495122 LHX3Q9UBR4 397 aa16.25■□□□□ 0.19
CBX4-204ENST00000495122 VPS51Q9UID3 782 aa16.25■□□□□ 0.19
CBX4-204ENST00000495122 TNRC6BQ9UPQ9 1833 aaKnown RBP16.24■□□□□ 0.19
CBX4-204ENST00000495122 A0A0G2JND7 137 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 G3V2L1 256 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 GOLGA8TH3BQL2 631 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 SOCS5O75159 536 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 HAUS5O94927 633 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 PENKP01210 267 aaPredicted RBP16.24■□□□□ 0.19
CBX4-204ENST00000495122 RBP1P09455 135 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 CD9P21926 228 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 GRIA4P48058 902 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 RHOAP61586 193 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 SATB1Q01826 763 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 OVGP1Q12889 678 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 PON2Q15165 354 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 ITPRIPL2Q3MIP1 535 aa16.24■□□□□ 0.19
CBX4-204ENST00000495122 DGKKQ5KSL6 1271 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms