RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 ATP5BP06576 529 aaKnown RBP16.48■□□□□ 0.23
ATG4B-225ENST00000494465 RBP1P09455 135 aa16.48■□□□□ 0.23
ATG4B-225ENST00000494465 CD1DP15813 335 aa16.48■□□□□ 0.23
ATG4B-225ENST00000494465 MPSTP25325 297 aa16.48■□□□□ 0.23
ATG4B-225ENST00000494465 FMO4P31512 558 aa16.48■□□□□ 0.23
ATG4B-225ENST00000494465 HNF1BP35680 557 aa16.48■□□□□ 0.23
ATG4B-225ENST00000494465 SNRPD1P62314 119 aaKnown RBP16.48■□□□□ 0.23
ATG4B-225ENST00000494465 KRT72Q14CN4 511 aa16.48■□□□□ 0.23
ATG4B-225ENST00000494465 SHHQ15465 462 aa16.48■□□□□ 0.23
ATG4B-225ENST00000494465 MYLK3Q32MK0 819 aa16.48■□□□□ 0.23
ATG4B-225ENST00000494465 VWA5B1Q5TIE3 1220 aa16.48■□□□□ 0.23
ATG4B-225ENST00000494465 TMEM215Q68D42 235 aa16.48■□□□□ 0.23
ATG4B-225ENST00000494465 KLC3Q6P597 504 aa16.48■□□□□ 0.23
ATG4B-225ENST00000494465 KIAA0907Q7Z7F0 614 aaPredicted RBP16.48■□□□□ 0.23
ATG4B-225ENST00000494465 C12orf76Q8N812 135 aaPredicted RBP16.48■□□□□ 0.23
ATG4B-225ENST00000494465 SLCO3A1Q9UIG8 710 aa16.48■□□□□ 0.23
ATG4B-225ENST00000494465 LNPEPQ9UIQ6 1025 aa16.48■□□□□ 0.23
ATG4B-225ENST00000494465 MRPS23Q9Y3D9 190 aaKnown RBP16.48■□□□□ 0.23
ATG4B-225ENST00000494465 RAP2CQ9Y3L5 183 aa16.48■□□□□ 0.23
ATG4B-225ENST00000494465 PKP3Q9Y446 797 aa16.48■□□□□ 0.23
ATG4B-225ENST00000494465 A8MT66 165 aa16.48■□□□□ 0.23
ATG4B-225ENST00000494465 ZBTB14O43829 449 aa16.48■□□□□ 0.23
ATG4B-225ENST00000494465 OR1I1O60431 355 aa16.48■□□□□ 0.23
ATG4B-225ENST00000494465 KRT16P08779 473 aa16.48■□□□□ 0.23
ATG4B-225ENST00000494465 TFEBP19484 476 aa16.48■□□□□ 0.23
ATG4B-225ENST00000494465 ELMSAN1Q6PJG2 1045 aa16.48■□□□□ 0.23
ATG4B-225ENST00000494465 TREML1Q86YW5 311 aa16.48■□□□□ 0.23
ATG4B-225ENST00000494465 FAM136AQ96C01 138 aa16.48■□□□□ 0.23
ATG4B-225ENST00000494465 ECHDC3Q96DC8 303 aa16.48■□□□□ 0.23
ATG4B-225ENST00000494465 OTUB2Q96DC9 234 aa16.48■□□□□ 0.23
ATG4B-225ENST00000494465 ILKAPQ9H0C8 392 aaPredicted RBP16.48■□□□□ 0.23
ATG4B-225ENST00000494465 POMKQ9H5K3 350 aa16.48■□□□□ 0.23
ATG4B-225ENST00000494465 HECAQ9UBI9 543 aaPredicted RBP16.48■□□□□ 0.23
ATG4B-225ENST00000494465 DPP7Q9UHL4 492 aa16.48■□□□□ 0.23
ATG4B-225ENST00000494465 FNDC3AQ9Y2H6 1198 aaKnown RBP16.48■□□□□ 0.23
ATG4B-225ENST00000494465 C5orf42Q9H799 3197 aa16.47■□□□□ 0.23
ATG4B-225ENST00000494465 CAPN8A6NHC0 703 aa16.47■□□□□ 0.23
ATG4B-225ENST00000494465 PAPLNO95428 1278 aa16.47■□□□□ 0.23
ATG4B-225ENST00000494465 SERPINA6P08185 405 aa16.47■□□□□ 0.23
ATG4B-225ENST00000494465 SERPINA4P29622 427 aa16.47■□□□□ 0.23
ATG4B-225ENST00000494465 TTPAP49638 278 aa16.47■□□□□ 0.23
ATG4B-225ENST00000494465 ELF3P78545 371 aaPredicted RBP16.47■□□□□ 0.23
ATG4B-225ENST00000494465 ECT2LQ008S8 904 aa16.47■□□□□ 0.23
ATG4B-225ENST00000494465 ZRANB3Q5FWF4 1079 aa16.47■□□□□ 0.23
ATG4B-225ENST00000494465 TRIM67Q6ZTA4 783 aa16.47■□□□□ 0.23
ATG4B-225ENST00000494465 RYBPQ8N488 228 aaPredicted RBP16.47■□□□□ 0.23
ATG4B-225ENST00000494465 MAPK15Q8TD08 544 aa16.47■□□□□ 0.23
ATG4B-225ENST00000494465 MYLIPQ8WY64 445 aa16.47■□□□□ 0.23
ATG4B-225ENST00000494465 INPP5DQ92835 1189 aa16.47■□□□□ 0.23
ATG4B-225ENST00000494465 UTP4Q969X6 686 aaKnown RBP16.47■□□□□ 0.23
ATG4B-225ENST00000494465 RSPRY1Q96DX4 576 aa16.47■□□□□ 0.23
ATG4B-225ENST00000494465 RILPQ96NA2 401 aa16.47■□□□□ 0.23
ATG4B-225ENST00000494465 HTATIP2Q9BUP3 242 aa16.47■□□□□ 0.23
ATG4B-225ENST00000494465 CEP44Q9C0F1 390 aa16.47■□□□□ 0.23
ATG4B-225ENST00000494465 ALG9Q9H6U8 611 aa16.47■□□□□ 0.23
ATG4B-225ENST00000494465 COG4Q9H9E3 785 aa16.47■□□□□ 0.23
ATG4B-225ENST00000494465 CERS4Q9HA82 394 aa16.47■□□□□ 0.23
ATG4B-225ENST00000494465 ZFYVE1Q9HBF4 777 aa16.47■□□□□ 0.23
ATG4B-225ENST00000494465 H3BMM5 538 aa16.46■□□□□ 0.23
ATG4B-225ENST00000494465 NPHS1O60500 1241 aa16.46■□□□□ 0.23
ATG4B-225ENST00000494465 SRP72O76094 671 aaKnown RBP16.46■□□□□ 0.23
ATG4B-225ENST00000494465 PBX2P40425 430 aa16.46■□□□□ 0.23
ATG4B-225ENST00000494465 PTPRNQ16849 979 aa16.46■□□□□ 0.23
ATG4B-225ENST00000494465 CTSL3PQ5NE16 218 aa16.46■□□□□ 0.23
ATG4B-225ENST00000494465 EPGNQ6UW88 154 aa16.46■□□□□ 0.23
ATG4B-225ENST00000494465 PACS2Q86VP3 889 aa16.46■□□□□ 0.23
ATG4B-225ENST00000494465 SMG7Q92540 1137 aaKnown RBP16.46■□□□□ 0.23
ATG4B-225ENST00000494465 TUBGCP5Q96RT8 1024 aa16.46■□□□□ 0.23
ATG4B-225ENST00000494465 C19orf43Q9BQ61 176 aa16.46■□□□□ 0.23
ATG4B-225ENST00000494465 CCDC106Q9BWC9 280 aa16.46■□□□□ 0.23
ATG4B-225ENST00000494465 GALPQ9UBC7 116 aa16.46■□□□□ 0.23
ATG4B-225ENST00000494465 ZDHHC2Q9UIJ5 367 aa16.46■□□□□ 0.23
ATG4B-225ENST00000494465 SLC25A13Q9UJS0 675 aa16.46■□□□□ 0.23
ATG4B-225ENST00000494465 OAS3Q9Y6K5 1087 aaKnown RBP16.46■□□□□ 0.23
ATG4B-225ENST00000494465 REV3LO60673 3130 aa16.46■□□□□ 0.23
ATG4B-225ENST00000494465 C1orf232A0A0U1RR37 186 aa16.46■□□□□ 0.23
ATG4B-225ENST00000494465 MATN2O00339 956 aa16.46■□□□□ 0.23
ATG4B-225ENST00000494465 CCDC22O60826 627 aa16.46■□□□□ 0.23
ATG4B-225ENST00000494465 IPO13O94829 963 aaKnown RBP16.46■□□□□ 0.23
ATG4B-225ENST00000494465 RHOBTB1O94844 696 aa16.46■□□□□ 0.23
ATG4B-225ENST00000494465 CLDN7O95471 211 aa16.46■□□□□ 0.23
ATG4B-225ENST00000494465 CA5AP35218 305 aa16.46■□□□□ 0.23
ATG4B-225ENST00000494465 CCNHP51946 323 aaPredicted RBP16.46■□□□□ 0.23
ATG4B-225ENST00000494465 CACNG1Q06432 222 aa16.46■□□□□ 0.23
ATG4B-225ENST00000494465 ASPHQ12797 758 aa16.46■□□□□ 0.23
ATG4B-225ENST00000494465 DMC1Q14565 340 aa16.46■□□□□ 0.23
ATG4B-225ENST00000494465 CYB5D1Q6P9G0 228 aa16.46■□□□□ 0.23
ATG4B-225ENST00000494465 PAQR3Q6TCH7 311 aa16.46■□□□□ 0.23
ATG4B-225ENST00000494465 DPY19L3Q6ZPD9 716 aa16.46■□□□□ 0.23
ATG4B-225ENST00000494465 PIWIL4Q7Z3Z4 852 aaKnown RBP16.46■□□□□ 0.23
ATG4B-225ENST00000494465 PCDH20Q8N6Y1 951 aaKnown RBP16.46■□□□□ 0.23
ATG4B-225ENST00000494465 ZNF557Q8N988 423 aaPredicted RBP16.46■□□□□ 0.23
ATG4B-225ENST00000494465 VN1R2Q8NFZ6 395 aa16.46■□□□□ 0.23
ATG4B-225ENST00000494465 GRIN3AQ8TCU5 1115 aa16.46■□□□□ 0.23
ATG4B-225ENST00000494465 AGR3Q8TD06 166 aa16.46■□□□□ 0.23
ATG4B-225ENST00000494465 NSL1Q96IY1 281 aa16.46■□□□□ 0.23
ATG4B-225ENST00000494465 LYSMD1Q96S90 227 aa16.46■□□□□ 0.23
ATG4B-225ENST00000494465 CPEB1Q9BZB8 566 aaKnown RBP16.46■□□□□ 0.23
ATG4B-225ENST00000494465 FAM50BQ9Y247 325 aa16.46■□□□□ 0.23
ATG4B-225ENST00000494465 VPS9D1Q9Y2B5 631 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms