RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 WDR26Q9H7D7 661 aa13.5□□□□□ -0.25
COL1A1-208ENST00000494334 RAB6BQ9NRW1 208 aa13.5□□□□□ -0.25
COL1A1-208ENST00000494334 DNAJC28Q9NX36 388 aa13.5□□□□□ -0.25
COL1A1-208ENST00000494334 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.5□□□□□ -0.25
COL1A1-208ENST00000494334 HACD3Q9P035 362 aa13.5□□□□□ -0.25
COL1A1-208ENST00000494334 DCDC2BA2VCK2 349 aa13.49□□□□□ -0.25
COL1A1-208ENST00000494334 TMEM202A6NGA9 273 aa13.49□□□□□ -0.25
COL1A1-208ENST00000494334 ERI2A8K979 691 aaKnown RBP13.49□□□□□ -0.25
COL1A1-208ENST00000494334 CACNB4O00305 520 aaPredicted RBP13.49□□□□□ -0.25
COL1A1-208ENST00000494334 SH3BP5O60239 455 aa13.49□□□□□ -0.25
COL1A1-208ENST00000494334 SDC3O75056 442 aa13.49□□□□□ -0.25
COL1A1-208ENST00000494334 SLC4A1P02730 911 aa13.49□□□□□ -0.25
COL1A1-208ENST00000494334 NME1P15531 152 aaKnown RBP13.49□□□□□ -0.25
COL1A1-208ENST00000494334 BPIP17213 487 aa13.49□□□□□ -0.25
COL1A1-208ENST00000494334 HTR1BP28222 390 aa13.49□□□□□ -0.25
COL1A1-208ENST00000494334 KIAA1024LP59773 190 aa13.49□□□□□ -0.25
COL1A1-208ENST00000494334 CDK3Q00526 305 aa13.49□□□□□ -0.25
COL1A1-208ENST00000494334 SEMA5AQ13591 1074 aa13.49□□□□□ -0.25
COL1A1-208ENST00000494334 HS1BP3Q53T59 392 aa13.49□□□□□ -0.25
COL1A1-208ENST00000494334 HENMT1Q5T8I9 393 aaKnown RBP13.49□□□□□ -0.25
COL1A1-208ENST00000494334 CCDC137Q6PK04 289 aaKnown RBP13.49□□□□□ -0.25
COL1A1-208ENST00000494334 C4orf22Q6V702 233 aa13.49□□□□□ -0.25
COL1A1-208ENST00000494334 PIP4P1Q86T03 277 aa13.49□□□□□ -0.25
COL1A1-208ENST00000494334 HEATR4Q86WZ0 1026 aa13.49□□□□□ -0.25
COL1A1-208ENST00000494334 CAPZA3Q96KX2 299 aa13.49□□□□□ -0.25
COL1A1-208ENST00000494334 WDR92Q96MX6 357 aa13.49□□□□□ -0.25
COL1A1-208ENST00000494334 TCEAL2Q9H3H9 227 aaPredicted RBP13.49□□□□□ -0.25
COL1A1-208ENST00000494334 BPIFA1Q9NP55 256 aa13.49□□□□□ -0.25
COL1A1-208ENST00000494334 IL17CQ9P0M4 197 aa13.49□□□□□ -0.25
COL1A1-208ENST00000494334 CFAP54Q96N23 3096 aa13.49□□□□□ -0.25
COL1A1-208ENST00000494334 GOLGA6L10A0A0M3HER8 536 aa13.48□□□□□ -0.25
COL1A1-208ENST00000494334 BUD23O43709 281 aaKnown RBP13.48□□□□□ -0.25
COL1A1-208ENST00000494334 PHF2O75151 1096 aa13.48□□□□□ -0.25
COL1A1-208ENST00000494334 PIAS2O75928 621 aa13.48□□□□□ -0.25
COL1A1-208ENST00000494334 SUN1O94901 812 aa13.48□□□□□ -0.25
COL1A1-208ENST00000494334 PYGLP06737 847 aa13.48□□□□□ -0.25
COL1A1-208ENST00000494334 MYCLP1P12525 358 aaPredicted RBP13.48□□□□□ -0.25
COL1A1-208ENST00000494334 JUNDP17535 347 aa13.48□□□□□ -0.25
COL1A1-208ENST00000494334 CSRP1P21291 193 aaKnown RBP13.48□□□□□ -0.25
COL1A1-208ENST00000494334 DGKAP23743 735 aa13.48□□□□□ -0.25
COL1A1-208ENST00000494334 CASQ1P31415 396 aa13.48□□□□□ -0.25
COL1A1-208ENST00000494334 HNRNPKP61978 463 aaKnown RBP eCLIP13.48□□□□□ -0.25
COL1A1-208ENST00000494334 PPARDQ03181 441 aa13.48□□□□□ -0.25
COL1A1-208ENST00000494334 PTPRCAPQ14761 206 aa13.48□□□□□ -0.25
COL1A1-208ENST00000494334 TRIP13Q15645 432 aaPredicted RBP13.48□□□□□ -0.25
COL1A1-208ENST00000494334 ALS2CLQ60I27 953 aa13.48□□□□□ -0.25
COL1A1-208ENST00000494334 KCTD16Q68DU8 428 aa13.48□□□□□ -0.25
COL1A1-208ENST00000494334 ADAMTSL4Q6UY14 1074 aa13.48□□□□□ -0.25
COL1A1-208ENST00000494334 SYT10Q6XYQ8 523 aa13.48□□□□□ -0.25
COL1A1-208ENST00000494334 KANSL1Q7Z3B3 1105 aa13.48□□□□□ -0.25
COL1A1-208ENST00000494334 RBFAQ8N0V3 343 aa13.48□□□□□ -0.25
COL1A1-208ENST00000494334 SLC25A45Q8N413 288 aa13.48□□□□□ -0.25
COL1A1-208ENST00000494334 OR56A4Q8NGH8 313 aa13.48□□□□□ -0.25
COL1A1-208ENST00000494334 BRSK1Q8TDC3 778 aa13.48□□□□□ -0.25
COL1A1-208ENST00000494334 TSACCQ96A04 125 aaPredicted RBP13.48□□□□□ -0.25
COL1A1-208ENST00000494334 CAMK1GQ96NX5 476 aa13.48□□□□□ -0.25
COL1A1-208ENST00000494334 CDH19Q9H159 772 aa13.48□□□□□ -0.25
COL1A1-208ENST00000494334 PHPT1Q9NRX4 125 aaPredicted RBP13.48□□□□□ -0.25
COL1A1-208ENST00000494334 RAD18Q9NS91 495 aa13.48□□□□□ -0.25
COL1A1-208ENST00000494334 UCKL1Q9NWZ5 548 aa13.48□□□□□ -0.25
COL1A1-208ENST00000494334 NFKBIL1Q9UBC1 381 aaPredicted RBP13.48□□□□□ -0.25
COL1A1-208ENST00000494334 KLQ9UEF7 1012 aa13.48□□□□□ -0.25
COL1A1-208ENST00000494334 FEZ2Q9UHY8 353 aaPredicted RBP13.48□□□□□ -0.25
COL1A1-208ENST00000494334 BTBD3Q9Y2F9 522 aa13.48□□□□□ -0.25
COL1A1-208ENST00000494334 ARL5AQ9Y689 179 aa13.48□□□□□ -0.25
COL1A1-208ENST00000494334 CEP250Q9BV73 2442 aa13.48□□□□□ -0.25
COL1A1-208ENST00000494334 ASCC3Q8N3C0 2202 aaKnown RBP13.47□□□□□ -0.25
COL1A1-208ENST00000494334 LAMA1P25391 3075 aa13.47□□□□□ -0.25
COL1A1-208ENST00000494334 TMEM131Q92545 1883 aa13.47□□□□□ -0.25
COL1A1-208ENST00000494334 FADS2P1A8MWK0 482 aa13.47□□□□□ -0.25
COL1A1-208ENST00000494334 E7EVH7 732 aa13.47□□□□□ -0.25
COL1A1-208ENST00000494334 H3BM21 787 aa13.47□□□□□ -0.25
COL1A1-208ENST00000494334 PDE2AO00408 941 aaPredicted RBP13.47□□□□□ -0.25
COL1A1-208ENST00000494334 FLRT2O43155 660 aa13.47□□□□□ -0.25
COL1A1-208ENST00000494334 CBFA2T3O75081 653 aa13.47□□□□□ -0.25
COL1A1-208ENST00000494334 KRT14P02533 472 aa13.47□□□□□ -0.25
COL1A1-208ENST00000494334 TPH1P17752 444 aa13.47□□□□□ -0.25
COL1A1-208ENST00000494334 KELP23276 732 aa13.47□□□□□ -0.25
COL1A1-208ENST00000494334 GRIA1P42261 906 aa13.47□□□□□ -0.25
COL1A1-208ENST00000494334 LMAN1P49257 510 aa13.47□□□□□ -0.25
COL1A1-208ENST00000494334 FNTAP49354 379 aa13.47□□□□□ -0.25
COL1A1-208ENST00000494334 HK3P52790 923 aa13.47□□□□□ -0.25
COL1A1-208ENST00000494334 DCDC1P59894 354 aa13.47□□□□□ -0.25
COL1A1-208ENST00000494334 SRP54P61011 504 aaKnown RBP13.47□□□□□ -0.25
COL1A1-208ENST00000494334 BASP1P80723 227 aaKnown RBP13.47□□□□□ -0.25
COL1A1-208ENST00000494334 TAF1AQ15573 450 aaPredicted RBP13.47□□□□□ -0.25
COL1A1-208ENST00000494334 ALG11Q2TAA5 492 aa13.47□□□□□ -0.25
COL1A1-208ENST00000494334 LINC00523Q86TU6 105 aa13.47□□□□□ -0.25
COL1A1-208ENST00000494334 NAXDQ8IW45 347 aa13.47□□□□□ -0.25
COL1A1-208ENST00000494334 PHACTR4Q8IZ21 702 aa13.47□□□□□ -0.25
COL1A1-208ENST00000494334 DEFB124Q8NES8 71 aa13.47□□□□□ -0.25
COL1A1-208ENST00000494334 OR52K1Q8NGK4 314 aa13.47□□□□□ -0.25
COL1A1-208ENST00000494334 RHBDD1Q8TEB9 315 aa13.47□□□□□ -0.25
COL1A1-208ENST00000494334 SETD7Q8WTS6 366 aaKnown RBP13.47□□□□□ -0.25
COL1A1-208ENST00000494334 OR1E3Q8WZA6 343 aa13.47□□□□□ -0.25
COL1A1-208ENST00000494334 COX14Q96I36 57 aa13.47□□□□□ -0.25
COL1A1-208ENST00000494334 SPATA16Q9BXB7 569 aa13.47□□□□□ -0.25
COL1A1-208ENST00000494334 FGF22Q9HCT0 170 aa13.47□□□□□ -0.25
COL1A1-208ENST00000494334 MRPL40Q9NQ50 206 aaKnown RBP13.47□□□□□ -0.25
COL1A1-208ENST00000494334 PIH1D1Q9NWS0 290 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms