RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 USP53Q70EK8 1073 aa23.81■■□□□ 1.4
TTC3-224ENST00000494243 NAGSQ8N159 534 aa23.81■■□□□ 1.4
TTC3-224ENST00000494243 USP7Q93009 1102 aa23.81■■□□□ 1.4
TTC3-224ENST00000494243 NUDT22Q9BRQ3 303 aa23.81■■□□□ 1.4
TTC3-224ENST00000494243 GOLGA6AQ9NYA3 693 aa23.81■■□□□ 1.4
TTC3-224ENST00000494243 FOXJ2Q9P0K8 574 aa23.81■■□□□ 1.4
TTC3-224ENST00000494243 CD84Q9UIB8 345 aa23.81■■□□□ 1.4
TTC3-224ENST00000494243 PLEKHM1Q9Y4G2 1056 aa23.81■■□□□ 1.4
TTC3-224ENST00000494243 AHCTF1Q8WYP5 2266 aa23.81■■□□□ 1.4
TTC3-224ENST00000494243 RHPN2P1A8MT19 583 aa23.8■■□□□ 1.4
TTC3-224ENST00000494243 MFSD11O43934 449 aa23.8■■□□□ 1.4
TTC3-224ENST00000494243 GARSP41250 739 aaKnown RBP23.8■■□□□ 1.4
TTC3-224ENST00000494243 FANCCQ00597 558 aa23.8■■□□□ 1.4
TTC3-224ENST00000494243 GALNT2Q10471 571 aa23.8■■□□□ 1.4
TTC3-224ENST00000494243 PAFAH1B3Q15102 231 aaKnown RBP23.8■■□□□ 1.4
TTC3-224ENST00000494243 MAP9Q49MG5 647 aa23.8■■□□□ 1.4
TTC3-224ENST00000494243 LRRC66Q68CR7 880 aa23.8■■□□□ 1.4
TTC3-224ENST00000494243 ALG1LQ6GMV1 187 aa23.8■■□□□ 1.4
TTC3-224ENST00000494243 ADAMTSL4Q6UY14 1074 aa23.8■■□□□ 1.4
TTC3-224ENST00000494243 ZFAND4Q86XD8 727 aa23.8■■□□□ 1.4
TTC3-224ENST00000494243 CPNE8Q86YQ8 564 aa23.8■■□□□ 1.4
TTC3-224ENST00000494243 MAML1Q92585 1016 aa23.8■■□□□ 1.4
TTC3-224ENST00000494243 SCAMP4Q969E2 229 aa23.8■■□□□ 1.4
TTC3-224ENST00000494243 CBX8Q9HC52 389 aa23.8■■□□□ 1.4
TTC3-224ENST00000494243 WDR70Q9NW82 654 aa23.8■■□□□ 1.4
TTC3-224ENST00000494243 A0A0J9YYE9 177 aa23.79■■□□□ 1.4
TTC3-224ENST00000494243 B8ZZF3 427 aa23.79■■□□□ 1.4
TTC3-224ENST00000494243 MYO1FO00160 1098 aa23.79■■□□□ 1.4
TTC3-224ENST00000494243 PPM1DO15297 605 aa23.79■■□□□ 1.4
TTC3-224ENST00000494243 TRBC1P01850 177 aa23.79■■□□□ 1.4
TTC3-224ENST00000494243 GPR1P46091 355 aa23.79■■□□□ 1.4
TTC3-224ENST00000494243 MAPK10P53779 464 aa23.79■■□□□ 1.4
TTC3-224ENST00000494243 ZBED6P86452 979 aa23.79■■□□□ 1.4
TTC3-224ENST00000494243 ITKQ08881 620 aa23.79■■□□□ 1.4
TTC3-224ENST00000494243 DPYSL3Q14195 570 aa23.79■■□□□ 1.4
TTC3-224ENST00000494243 NCBP2-AS2Q69YL0 99 aa23.79■■□□□ 1.4
TTC3-224ENST00000494243 DOK6Q6PKX4 331 aa23.79■■□□□ 1.4
TTC3-224ENST00000494243 NLRP8Q86W28 1048 aa23.79■■□□□ 1.4
TTC3-224ENST00000494243 DTX1Q86Y01 620 aa23.79■■□□□ 1.4
TTC3-224ENST00000494243 CPLX3Q8WVH0 158 aa23.79■■□□□ 1.4
TTC3-224ENST00000494243 AP2M1Q96CW1 435 aa23.79■■□□□ 1.4
TTC3-224ENST00000494243 AGAP2Q99490 1192 aa23.79■■□□□ 1.4
TTC3-224ENST00000494243 POLR1EQ9GZS1 481 aaKnown RBP23.79■■□□□ 1.4
TTC3-224ENST00000494243 CAPN11Q9UMQ6 739 aa23.79■■□□□ 1.4
TTC3-224ENST00000494243 TMEM98Q9Y2Y6 226 aa23.79■■□□□ 1.4
TTC3-224ENST00000494243 IGHV5-10-1A0A0J9YXX1 117 aa23.78■■□□□ 1.4
TTC3-224ENST00000494243 J3QKU1 62 aa23.78■■□□□ 1.4
TTC3-224ENST00000494243 MATN3O15232 486 aa23.78■■□□□ 1.4
TTC3-224ENST00000494243 PRLP01236 227 aa23.78■■□□□ 1.4
TTC3-224ENST00000494243 CCL4P13236 92 aa23.78■■□□□ 1.4
TTC3-224ENST00000494243 GPR3P46089 330 aa23.78■■□□□ 1.4
TTC3-224ENST00000494243 DSC2Q02487 901 aa23.78■■□□□ 1.4
TTC3-224ENST00000494243 CLPPQ16740 277 aaPredicted RBP23.78■■□□□ 1.4
TTC3-224ENST00000494243 LINC00303Q3SY05 128 aa23.78■■□□□ 1.4
TTC3-224ENST00000494243 ALKBH5Q6P6C2 394 aaKnown RBP23.78■■□□□ 1.4
TTC3-224ENST00000494243 ZNF765Q7L2R6 523 aa23.78■■□□□ 1.4
TTC3-224ENST00000494243 LUZP1Q86V48 1076 aa23.78■■□□□ 1.4
TTC3-224ENST00000494243 EXD3Q8N9H8 876 aa23.78■■□□□ 1.4
TTC3-224ENST00000494243 TSGA13Q96PP4 275 aa23.78■■□□□ 1.4
TTC3-224ENST00000494243 B3GNT4Q9C0J1 378 aa23.78■■□□□ 1.4
TTC3-224ENST00000494243 NENFQ9UMX5 172 aa23.78■■□□□ 1.4
TTC3-224ENST00000494243 MAP3K6O95382 1288 aa23.77■■□□□ 1.4
TTC3-224ENST00000494243 KRT10P13645 584 aa23.77■■□□□ 1.4
TTC3-224ENST00000494243 ZNF30P17039 623 aa23.77■■□□□ 1.4
TTC3-224ENST00000494243 SSR1P43307 286 aaKnown RBP23.77■■□□□ 1.4
TTC3-224ENST00000494243 STC1P52823 247 aa23.77■■□□□ 1.4
TTC3-224ENST00000494243 SQSTM1Q13501 440 aa23.77■■□□□ 1.4
TTC3-224ENST00000494243 NFKBIBQ15653 356 aa23.77■■□□□ 1.4
TTC3-224ENST00000494243 HADHQ16836 314 aaKnown RBP23.77■■□□□ 1.4
TTC3-224ENST00000494243 PYCR3Q53H96 274 aa23.77■■□□□ 1.4
TTC3-224ENST00000494243 CCDC122Q5T0U0 273 aa23.77■■□□□ 1.4
TTC3-224ENST00000494243 TRIM74Q86UV6 250 aa23.77■■□□□ 1.4
TTC3-224ENST00000494243 NDUFAF2Q8N183 169 aa23.77■■□□□ 1.4
TTC3-224ENST00000494243 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.77■■□□□ 1.4
TTC3-224ENST00000494243 RCBTB1Q8NDN9 531 aa23.77■■□□□ 1.4
TTC3-224ENST00000494243 ARRDC2Q8TBH0 407 aa23.77■■□□□ 1.4
TTC3-224ENST00000494243 FATE1Q969F0 183 aa23.77■■□□□ 1.4
TTC3-224ENST00000494243 SGF29Q96ES7 293 aa23.77■■□□□ 1.4
TTC3-224ENST00000494243 OR2M4Q96R27 311 aa23.77■■□□□ 1.4
TTC3-224ENST00000494243 CHKBQ9Y259 395 aa23.77■■□□□ 1.4
TTC3-224ENST00000494243 CCNCP24863 283 aa23.76■■□□□ 1.39
TTC3-224ENST00000494243 ACTR1BP42025 376 aa23.76■■□□□ 1.39
TTC3-224ENST00000494243 UBASH3AP57075 661 aa23.76■■□□□ 1.39
TTC3-224ENST00000494243 ACTR1AP61163 376 aa23.76■■□□□ 1.39
TTC3-224ENST00000494243 ANKRD20A8PQ5CZ79 823 aa23.76■■□□□ 1.39
TTC3-224ENST00000494243 NKAIN2Q5VXU1 208 aa23.76■■□□□ 1.39
TTC3-224ENST00000494243 VASH2Q86V25 355 aa23.76■■□□□ 1.39
TTC3-224ENST00000494243 LRRN4Q8WUT4 740 aa23.76■■□□□ 1.39
TTC3-224ENST00000494243 COX14Q96I36 57 aa23.76■■□□□ 1.39
TTC3-224ENST00000494243 CDH19Q9H159 772 aa23.76■■□□□ 1.39
TTC3-224ENST00000494243 RBM22Q9NW64 420 aaKnown RBP eCLIP23.76■■□□□ 1.392e-6■■■■■ 27.2
TTC3-224ENST00000494243 IGHV1OR21-1A0A087WYE8 117 aa23.75■■□□□ 1.39
TTC3-224ENST00000494243 IQCJ-SCHIP1C9J366 451 aaPredicted RBP23.75■■□□□ 1.39
TTC3-224ENST00000494243 HGSO14964 777 aaPredicted RBP23.75■■□□□ 1.39
TTC3-224ENST00000494243 WT1P19544 449 aaPredicted RBP23.75■■□□□ 1.39
TTC3-224ENST00000494243 CES1P23141 567 aa23.75■■□□□ 1.39
TTC3-224ENST00000494243 ARSDP51689 593 aa23.75■■□□□ 1.39
TTC3-224ENST00000494243 LIMK2P53671 638 aa23.75■■□□□ 1.39
TTC3-224ENST00000494243 TAS2R40P59535 323 aa23.75■■□□□ 1.39
TTC3-224ENST00000494243 NIPAL4Q0D2K0 466 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms