RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 GBE1Q04446 702 aa19.13■□□□□ 0.65
COL27A1-207ENST00000494090 DRICH1Q6PGQ1 229 aaPredicted RBP19.13■□□□□ 0.65
COL27A1-207ENST00000494090 CPA6Q8N4T0 437 aa19.13■□□□□ 0.65
COL27A1-207ENST00000494090 KLRG1Q96E93 195 aa19.13■□□□□ 0.65
COL27A1-207ENST00000494090 WDR55Q9H6Y2 383 aaPredicted RBP19.13■□□□□ 0.65
COL27A1-207ENST00000494090 CNTNAP1P78357 1384 aa19.13■□□□□ 0.65
COL27A1-207ENST00000494090 C5orf60A6NFR6 353 aa19.13■□□□□ 0.65
COL27A1-207ENST00000494090 GABRR2P28476 465 aa19.13■□□□□ 0.65
COL27A1-207ENST00000494090 IL12RB1P42701 662 aa19.13■□□□□ 0.65
COL27A1-207ENST00000494090 UGT2B15P54855 530 aa19.13■□□□□ 0.65
COL27A1-207ENST00000494090 INTS6LQ5JSJ4 861 aaKnown RBP19.13■□□□□ 0.65
COL27A1-207ENST00000494090 PHF10Q8WUB8 498 aaKnown RBP19.13■□□□□ 0.65
COL27A1-207ENST00000494090 PPP1R13LQ8WUF5 828 aa19.13■□□□□ 0.65
COL27A1-207ENST00000494090 VPS35Q96QK1 796 aa19.13■□□□□ 0.65
COL27A1-207ENST00000494090 MRTO4Q9UKD2 239 aaKnown RBP19.13■□□□□ 0.65
COL27A1-207ENST00000494090 ZNF780BQ9Y6R6 833 aa19.13■□□□□ 0.65
COL27A1-207ENST00000494090 MC4RP32245 332 aa19.13■□□□□ 0.65
COL27A1-207ENST00000494090 LGALS3BPQ08380 585 aa19.13■□□□□ 0.65
COL27A1-207ENST00000494090 FASTKD3Q14CZ7 662 aaKnown RBP19.13■□□□□ 0.65
COL27A1-207ENST00000494090 SLC26A9Q7LBE3 791 aa19.13■□□□□ 0.65
COL27A1-207ENST00000494090 PLEKHG4BQ96PX9 1271 aa19.13■□□□□ 0.65
COL27A1-207ENST00000494090 ASF1AQ9Y294 204 aa19.13■□□□□ 0.65
COL27A1-207ENST00000494090 IPO13O94829 963 aaKnown RBP19.13■□□□□ 0.65
COL27A1-207ENST00000494090 CHRNB2P17787 502 aa19.13■□□□□ 0.65
COL27A1-207ENST00000494090 PTPN9P43378 593 aa19.13■□□□□ 0.65
COL27A1-207ENST00000494090 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.13■□□□□ 0.65
COL27A1-207ENST00000494090 CHSY3Q70JA7 882 aa19.13■□□□□ 0.65
COL27A1-207ENST00000494090 TBC1D21Q8IYX1 336 aa19.13■□□□□ 0.65
COL27A1-207ENST00000494090 LMAN2LQ9H0V9 348 aa19.13■□□□□ 0.65
COL27A1-207ENST00000494090 A0A0J9YYE9 177 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 SMIM28A0A1B0GU29 152 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 OR1D2P34982 312 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 CDH13P55290 713 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 HSDL1Q3SXM5 330 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 GJC2Q5T442 439 aaPredicted RBP19.12■□□□□ 0.65
COL27A1-207ENST00000494090 IZUMO1Q8IYV9 350 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 CCDC185Q8N715 623 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 FERD3LQ96RJ6 166 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 C3orf14Q9HBI5 128 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 PHPT1Q9NRX4 125 aaPredicted RBP19.12■□□□□ 0.65
COL27A1-207ENST00000494090 ZNF624Q9P2J8 865 aaPredicted RBP19.12■□□□□ 0.65
COL27A1-207ENST00000494090 MAFBQ9Y5Q3 323 aaPredicted RBP19.12■□□□□ 0.65
COL27A1-207ENST00000494090 NDUFV1P49821 464 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 EML3Q32P44 896 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 DMTF1Q9Y222 760 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 PCDHB9Q9Y5E1 797 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 ELP6Q0PNE2 266 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 ABRQ12979 859 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 RFTN2Q52LD8 501 aaPredicted RBP19.12■□□□□ 0.65
COL27A1-207ENST00000494090 HECTD2Q5U5R9 776 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 KBTBD8Q8NFY9 601 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 ASZ1Q8WWH4 475 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 TEFMQ96QE5 360 aaKnown RBP19.12■□□□□ 0.65
COL27A1-207ENST00000494090 GBA3Q9H227 469 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 PCDH12Q9NPG4 1184 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 A8MUI8 341 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 MFN2O95140 757 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 AP2A1O95782 977 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 PRG2P13727 222 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 SELPP16109 830 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 PCSK2P16519 638 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 TCEAL5Q5H9L2 206 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 TREML2Q5T2D2 321 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 MZT2BQ6NZ67 158 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 SLC24A5Q71RS6 500 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 DGCR14Q96DF8 476 aaKnown RBP19.12■□□□□ 0.65
COL27A1-207ENST00000494090 OR52E6Q96RD3 313 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 EHD3Q9NZN3 535 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 CDH22Q9UJ99 828 aa19.12■□□□□ 0.65
COL27A1-207ENST00000494090 ITGAXP20702 1163 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 CYP3A5P20815 502 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 RCVRNP35243 200 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 YBEYP58557 167 aaPredicted RBP19.11■□□□□ 0.65
COL27A1-207ENST00000494090 ITGA7Q13683 1181 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 NDUFA5Q16718 116 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 SLC5A9Q2M3M2 681 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 RNF44Q7L0R7 432 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 C1orf127Q8N9H9 656 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 SIX2Q9NPC8 291 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 EGFL7Q9UHF1 273 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 RWDD3Q9Y3V2 267 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 CAMTA1Q9Y6Y1 1673 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 SIN3BO75182 1162 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 RPP40O75818 363 aaKnown RBP19.11■□□□□ 0.65
COL27A1-207ENST00000494090 MMP3P08254 477 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 CXCR3P49682 368 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 CBX2Q14781 532 aaPredicted RBP19.11■□□□□ 0.65
COL27A1-207ENST00000494090 NPY5RQ15761 445 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 ANKRD22Q5VYY1 191 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 GALNT18Q6P9A2 607 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 GK5Q6ZS86 529 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 ADGRG2Q8IZP9 1017 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 KLHL5Q96PQ7 755 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 PANX1Q96RD7 426 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 HIPK3Q9H422 1215 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 CCNB1IP1Q9NPC3 277 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 GRHL1Q9NZI5 618 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 BTBD3Q9Y2F9 522 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 SNPHO15079 494 aa19.11■□□□□ 0.65
COL27A1-207ENST00000494090 SEC24AO95486 1093 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms