RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 ARHGAP6O43182 974 aa22.55■■□□□ 1.2
SNIP1-203ENST00000493916 TJP3O95049 919 aa22.55■■□□□ 1.2
SNIP1-203ENST00000493916 NDST3O95803 873 aa22.55■■□□□ 1.2
SNIP1-203ENST00000493916 CEACAM5P06731 702 aa22.55■■□□□ 1.2
SNIP1-203ENST00000493916 NFKB1P19838 968 aa22.55■■□□□ 1.2
SNIP1-203ENST00000493916 RPIAP49247 311 aa22.55■■□□□ 1.2
SNIP1-203ENST00000493916 INSM1Q01101 510 aaPredicted RBP22.55■■□□□ 1.2
SNIP1-203ENST00000493916 OTUD4Q01804 1114 aaKnown RBP22.55■■□□□ 1.2
SNIP1-203ENST00000493916 PCSK7Q16549 785 aa22.55■■□□□ 1.2
SNIP1-203ENST00000493916 ST3GAL2Q16842 350 aa22.55■■□□□ 1.2
SNIP1-203ENST00000493916 SLC35F3Q8IY50 421 aa22.55■■□□□ 1.2
SNIP1-203ENST00000493916 CACTIN-AS1Q8N1I8 211 aa22.55■■□□□ 1.2
SNIP1-203ENST00000493916 ACTL9Q8TC94 416 aa22.55■■□□□ 1.2
SNIP1-203ENST00000493916 IFI44Q8TCB0 444 aa22.55■■□□□ 1.2
SNIP1-203ENST00000493916 CCHCR1Q8TD31 782 aa22.55■■□□□ 1.2
SNIP1-203ENST00000493916 SCAMP4Q969E2 229 aa22.55■■□□□ 1.2
SNIP1-203ENST00000493916 FCRL5Q96RD9 977 aa22.55■■□□□ 1.2
SNIP1-203ENST00000493916 MAGEE1Q9HCI5 957 aa22.55■■□□□ 1.2
SNIP1-203ENST00000493916 PKD2L2Q9NZM6 624 aa22.55■■□□□ 1.2
SNIP1-203ENST00000493916 FAM153AQ9UHL3 310 aa22.55■■□□□ 1.2
SNIP1-203ENST00000493916 CAPN6Q9Y6Q1 641 aa22.55■■□□□ 1.2
SNIP1-203ENST00000493916 MAP1BP46821 2468 aaKnown RBP22.54■■□□□ 1.2
SNIP1-203ENST00000493916 USP24Q9UPU5 2620 aa22.54■■□□□ 1.2
SNIP1-203ENST00000493916 EME2A4GXA9 379 aaPredicted RBP22.54■■□□□ 1.2
SNIP1-203ENST00000493916 H7C0C1 242 aa22.54■■□□□ 1.2
SNIP1-203ENST00000493916 DDX3YO15523 660 aaKnown RBP22.54■■□□□ 1.2
SNIP1-203ENST00000493916 FTCDO95954 541 aa22.54■■□□□ 1.2
SNIP1-203ENST00000493916 ATP5OP48047 213 aa22.54■■□□□ 1.2
SNIP1-203ENST00000493916 SPINT3P49223 89 aa22.54■■□□□ 1.2
SNIP1-203ENST00000493916 CAMK2BQ13554 666 aa22.54■■□□□ 1.2
SNIP1-203ENST00000493916 AADACL2Q6P093 401 aa22.54■■□□□ 1.2
SNIP1-203ENST00000493916 KDELC1Q6UW63 502 aa22.54■■□□□ 1.2
SNIP1-203ENST00000493916 LYSMD3Q7Z3D4 306 aa22.54■■□□□ 1.2
SNIP1-203ENST00000493916 KDELC2Q7Z4H8 507 aa22.54■■□□□ 1.2
SNIP1-203ENST00000493916 MARCH9Q86YJ5 346 aa22.54■■□□□ 1.2
SNIP1-203ENST00000493916 CDKL3Q8IVW4 592 aaPredicted RBP22.54■■□□□ 1.2
SNIP1-203ENST00000493916 ARL10Q8N8L6 244 aa22.54■■□□□ 1.2
SNIP1-203ENST00000493916 HES6Q96HZ4 224 aa22.54■■□□□ 1.2
SNIP1-203ENST00000493916 SRPK1Q96SB4 655 aaKnown RBP22.54■■□□□ 1.2
SNIP1-203ENST00000493916 RIOK2Q9BVS4 552 aaKnown RBP22.54■■□□□ 1.2
SNIP1-203ENST00000493916 CYP4F12Q9HCS2 524 aa22.54■■□□□ 1.2
SNIP1-203ENST00000493916 SLC17A4Q9Y2C5 497 aa22.54■■□□□ 1.2
SNIP1-203ENST00000493916 KMT2BQ9UMN6 2715 aaPredicted RBP22.54■■□□□ 1.2
SNIP1-203ENST00000493916 PMPCBO75439 489 aa22.53■■□□□ 1.2
SNIP1-203ENST00000493916 JUPP14923 745 aa22.53■■□□□ 1.2
SNIP1-203ENST00000493916 RBL1P28749 1068 aa22.53■■□□□ 1.2
SNIP1-203ENST00000493916 CLDN6P56747 220 aa22.53■■□□□ 1.2
SNIP1-203ENST00000493916 HENMT1Q5T8I9 393 aaKnown RBP22.53■■□□□ 1.2
SNIP1-203ENST00000493916 GUSBP11Q6P575 273 aa22.53■■□□□ 1.2
SNIP1-203ENST00000493916 PID1Q7Z2X4 250 aa22.53■■□□□ 1.2
SNIP1-203ENST00000493916 NAT6Q93015 286 aa22.53■■□□□ 1.2
SNIP1-203ENST00000493916 COX14Q96I36 57 aa22.53■■□□□ 1.2
SNIP1-203ENST00000493916 WDR24Q96S15 920 aa22.53■■□□□ 1.2
SNIP1-203ENST00000493916 FERMT1Q9BQL6 677 aa22.53■■□□□ 1.2
SNIP1-203ENST00000493916 TMEM168Q9H0V1 697 aa22.53■■□□□ 1.2
SNIP1-203ENST00000493916 ZFYVE1Q9HBF4 777 aa22.53■■□□□ 1.2
SNIP1-203ENST00000493916 UBP1Q9NZI7 540 aa22.53■■□□□ 1.2
SNIP1-203ENST00000493916 PACSIN2Q9UNF0 486 aaPredicted RBP22.53■■□□□ 1.2
SNIP1-203ENST00000493916 ZNF711Q9Y462 761 aa22.53■■□□□ 1.2
SNIP1-203ENST00000493916 IGF2RP11717 2491 aa22.52■■□□□ 1.2
SNIP1-203ENST00000493916 LOC285095A0A1B0GVY8 99 aa22.52■■□□□ 1.2
SNIP1-203ENST00000493916 KRT86O43790 486 aa22.52■■□□□ 1.2
SNIP1-203ENST00000493916 OPA1O60313 960 aa22.52■■□□□ 1.2
SNIP1-203ENST00000493916 ZNF189O75820 626 aaPredicted RBP22.52■■□□□ 1.2
SNIP1-203ENST00000493916 EPOP01588 193 aa22.52■■□□□ 1.2
SNIP1-203ENST00000493916 CAPNS1P04632 268 aa22.52■■□□□ 1.2
SNIP1-203ENST00000493916 IVLP07476 585 aa22.52■■□□□ 1.2
SNIP1-203ENST00000493916 WNT3AP56704 352 aa22.52■■□□□ 1.2
SNIP1-203ENST00000493916 EIF3EP60228 445 aaKnown RBP22.52■■□□□ 1.2
SNIP1-203ENST00000493916 TCEA2Q15560 299 aa22.52■■□□□ 1.2
SNIP1-203ENST00000493916 CCDC70Q6NSX1 233 aa22.52■■□□□ 1.2
SNIP1-203ENST00000493916 EFL1Q7Z2Z2 1120 aaKnown RBP22.52■■□□□ 1.2
SNIP1-203ENST00000493916 DCBLD1Q8N8Z6 715 aa22.52■■□□□ 1.2
SNIP1-203ENST00000493916 KYQ8NBH2 561 aa22.52■■□□□ 1.2
SNIP1-203ENST00000493916 UBE2Q2Q8WVN8 375 aa22.52■■□□□ 1.2
SNIP1-203ENST00000493916 ZCCHC14Q8WYQ9 949 aaKnown RBP22.52■■□□□ 1.2
SNIP1-203ENST00000493916 EID2BQ96D98 161 aa22.52■■□□□ 1.2
SNIP1-203ENST00000493916 SCARF2Q96GP6 870 aaPredicted RBP22.52■■□□□ 1.2
SNIP1-203ENST00000493916 HIC2Q96JB3 615 aa22.52■■□□□ 1.2
SNIP1-203ENST00000493916 AGAP2Q99490 1192 aa22.52■■□□□ 1.2
SNIP1-203ENST00000493916 CDH19Q9H159 772 aa22.52■■□□□ 1.2
SNIP1-203ENST00000493916 GBA3Q9H227 469 aa22.52■■□□□ 1.2
SNIP1-203ENST00000493916 FAM83DQ9H4H8 585 aa22.52■■□□□ 1.2
SNIP1-203ENST00000493916 CARS2Q9HA77 564 aaKnown RBP22.52■■□□□ 1.2
SNIP1-203ENST00000493916 NFKBIL1Q9UBC1 381 aaPredicted RBP22.52■■□□□ 1.2
SNIP1-203ENST00000493916 RSPH14Q9UHP6 348 aa22.52■■□□□ 1.2
SNIP1-203ENST00000493916 MOSPD1Q9UJG1 213 aa22.52■■□□□ 1.2
SNIP1-203ENST00000493916 SUFUQ9UMX1 484 aa22.52■■□□□ 1.2
SNIP1-203ENST00000493916 GPR34Q9UPC5 381 aa22.52■■□□□ 1.2
SNIP1-203ENST00000493916 FUCA1P04066 466 aa22.51■■□□□ 1.19
SNIP1-203ENST00000493916 RBP3P10745 1247 aa22.51■■□□□ 1.19
SNIP1-203ENST00000493916 DCDC1P59894 354 aa22.51■■□□□ 1.19
SNIP1-203ENST00000493916 MPP3Q13368 585 aa22.51■■□□□ 1.19
SNIP1-203ENST00000493916 CDCP2Q5VXM1 449 aa22.51■■□□□ 1.19
SNIP1-203ENST00000493916 TMC3Q7Z5M5 1100 aa22.51■■□□□ 1.19
SNIP1-203ENST00000493916 TAF8Q7Z7C8 310 aa22.51■■□□□ 1.19
SNIP1-203ENST00000493916 PDCD7Q8N8D1 485 aaKnown RBP22.51■■□□□ 1.19
SNIP1-203ENST00000493916 GPBAR1Q8TDU6 330 aa22.51■■□□□ 1.19
SNIP1-203ENST00000493916 OXNAD1Q96HP4 312 aaPredicted RBP22.51■■□□□ 1.19
SNIP1-203ENST00000493916 MRGPRX2Q96LB1 330 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms