RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 NANPQ8TBE9 248 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 TMEM174Q8WUU8 243 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 ST6GAL2Q96JF0 529 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 GAD1Q99259 594 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 KIFC1Q9BW19 673 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 SORBS1Q9BX66 1292 aaKnown RBP6.85□□□□□ -1.31
VPS13B-205ENST00000493587 ANO3Q9BYT9 981 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 INTS2Q9H0H0 1204 aaKnown RBP6.85□□□□□ -1.31
VPS13B-205ENST00000493587 CD93Q9NPY3 652 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 GMPR2Q9P2T1 348 aaKnown RBP6.85□□□□□ -1.31
VPS13B-205ENST00000493587 U3KQV3 271 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 POLR2AP24928 1970 aaKnown RBP6.85□□□□□ -1.31
VPS13B-205ENST00000493587 SSC5DA1L4H1 1573 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 PPM1BO75688 479 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 OR52Z1P0C646 297 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 RALBP11234 206 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 ETS1P14921 441 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 JUPP14923 745 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 CYP11B1P15538 503 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 CDK8P49336 464 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 HLCSP50747 726 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 ARFIP1P53367 373 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 KIF19Q2TAC6 998 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 SPANXN2Q5MJ10 180 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 OTUD3Q5T2D3 398 aaPredicted RBP6.85□□□□□ -1.31
VPS13B-205ENST00000493587 RETSATQ6NUM9 610 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 HHIPL2Q6UWX4 724 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 LAYNQ6UX15 382 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 GDPD3Q7L5L3 318 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 ANKS1BQ7Z6G8 1248 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 KRT77Q7Z794 578 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 UBR7Q8N806 425 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 FBXO36Q8NEA4 188 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 IL17RDQ8NFM7 739 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 CMASQ8NFW8 434 aaPredicted RBP6.85□□□□□ -1.31
VPS13B-205ENST00000493587 PNPT1Q8TCS8 783 aaKnown RBP6.85□□□□□ -1.31
VPS13B-205ENST00000493587 SCYL1Q96KG9 808 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 SGIP1Q9BQI5 828 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 FAM96AQ9H5X1 160 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 CUEDC1Q9NWM3 386 aaPredicted RBP6.85□□□□□ -1.31
VPS13B-205ENST00000493587 C14orf119Q9NWQ9 140 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 B3GNT2Q9NY97 397 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 RAB23Q9ULC3 237 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 PCDHGA9Q9Y5G4 932 aaKnown RBP6.85□□□□□ -1.31
VPS13B-205ENST00000493587 PCDHGA2Q9Y5H1 932 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 SESN1Q9Y6P5 492 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 PLXNA1Q9UIW2 1896 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 PLXNB2O15031 1838 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 TRIM24O15164 1050 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 TP73O15350 636 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 HUS1O60921 280 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 BCAS2O75934 225 aaPredicted RBP6.85□□□□□ -1.31
VPS13B-205ENST00000493587 VAPBO95292 243 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 HSPA4LO95757 839 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 PLA2G4BP0C869 781 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 SLC1A6P48664 564 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 HARS2P49590 506 aaKnown RBP6.85□□□□□ -1.31
VPS13B-205ENST00000493587 SP2Q02086 613 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 GRIK2Q13002 908 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 PPIL2Q13356 520 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 DMC1Q14565 340 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 MFSD13AQ14CX5 517 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 TSC22D1Q15714 1073 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 TMEM119Q4V9L6 283 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 FASTKD1Q53R41 847 aaKnown RBP6.85□□□□□ -1.31
VPS13B-205ENST00000493587 NHSL2Q5HYW2 709 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 ADGRD1Q6QNK2 874 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 JAZF1Q86VZ6 243 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 ZSWIM9Q86XI8 627 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 LACC1Q8IV20 430 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 TIGD4Q8IY51 512 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 PDIK1LQ8N165 341 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 ADAM32Q8TC27 787 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 GANCQ8TET4 914 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 FRS2Q8WU20 508 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 PTERQ96BW5 349 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 ARL5BQ96KC2 179 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 ZNF578Q96N58 590 aaPredicted RBP6.85□□□□□ -1.31
VPS13B-205ENST00000493587 APOL4Q9BPW4 351 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 KIFC3Q9BVG8 833 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 FAM126AQ9BYI3 521 aaPredicted RBP6.85□□□□□ -1.31
VPS13B-205ENST00000493587 C8orf33Q9H7E9 229 aaPredicted RBP6.85□□□□□ -1.31
VPS13B-205ENST00000493587 ASNSD1Q9NWL6 643 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 DTLQ9NZJ0 730 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 FAM198AQ9UFP1 575 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 CNOT6Q9ULM6 557 aaKnown RBP6.85□□□□□ -1.31
VPS13B-205ENST00000493587 NENFQ9UMX5 172 aa6.85□□□□□ -1.31
VPS13B-205ENST00000493587 RALGAPA2Q2PPJ7 1873 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 ANGPT2O15123 496 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 AVILO75366 819 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 RNF224P0DH78 156 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 GLRA2P23416 452 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 EEF1A1P68104 462 aaKnown RBP6.84□□□□□ -1.31
VPS13B-205ENST00000493587 MLLT1Q03111 559 aaPredicted RBP6.84□□□□□ -1.31
VPS13B-205ENST00000493587 EEF1A2Q05639 463 aaKnown RBP6.84□□□□□ -1.31
VPS13B-205ENST00000493587 LGALS3BPQ08380 585 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 KCNJ11Q14654 390 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 EEF1A1P5Q5VTE0 462 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 B3GNT9Q6UX72 402 aa6.84□□□□□ -1.31
VPS13B-205ENST00000493587 DPP8Q6V1X1 898 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms