RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 CHRAC1Q9NRG0 131 aa11.52□□□□□ -0.57
LSM2-214ENST00000493387 TREX1Q9NSU2 369 aa11.52□□□□□ -0.57
LSM2-214ENST00000493387 ZC3H7BQ9UGR2 993 aaKnown RBP11.52□□□□□ -0.57
LSM2-214ENST00000493387 NFU1Q9UMS0 254 aa11.52□□□□□ -0.57
LSM2-214ENST00000493387 COQ6Q9Y2Z9 468 aa11.52□□□□□ -0.57
LSM2-214ENST00000493387 TEX264Q9Y6I9 313 aa11.52□□□□□ -0.57
LSM2-214ENST00000493387 ZNF318Q5VUA4 2279 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 GLYATL1P3A0A0U1RQE8 302 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 A0A0U1RQS6 177 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 FPGTO14772 594 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 BUD23O43709 281 aaKnown RBP11.51□□□□□ -0.57
LSM2-214ENST00000493387 SPAG6O75602 509 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 TSHRP16473 764 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 GM2AP17900 193 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 MAGEA4P43358 317 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 MTM1Q13496 603 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 ITGA9Q13797 1035 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 FGL2Q14314 439 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 FRG1Q14331 258 aaKnown RBP11.51□□□□□ -0.57
LSM2-214ENST00000493387 STAT4Q14765 748 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 WSCD2Q2TBF2 565 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 HENMT1Q5T8I9 393 aaKnown RBP11.51□□□□□ -0.57
LSM2-214ENST00000493387 LYSMD4Q5XG99 296 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 KIAA0930Q6ICG6 404 aaPredicted RBP11.51□□□□□ -0.57
LSM2-214ENST00000493387 ESRP1Q6NXG1 681 aaKnown RBP11.51□□□□□ -0.57
LSM2-214ENST00000493387 AFTPHQ6ULP2 937 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 CCDC25Q86WR0 208 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 PALM2Q8IXS6 379 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 TMEFF1Q8IYR6 380 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 ZBED8Q8IZ13 594 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 MPP5Q8N3R9 675 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 TP53I13Q8NBR0 393 aaPredicted RBP11.51□□□□□ -0.57
LSM2-214ENST00000493387 FBXO36Q8NEA4 188 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 OR13C4Q8NGS5 318 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 KLK6Q92876 244 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.51□□□□□ -0.57
LSM2-214ENST00000493387 SKA1Q96BD8 255 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 CENPTQ96BT3 561 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 LOXL4Q96JB6 756 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 SERAC1Q96JX3 654 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 PWWP2AQ96N64 755 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 TTC25Q96NG3 672 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 TTC1Q99614 292 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 RIOK2Q9BVS4 552 aaKnown RBP11.51□□□□□ -0.57
LSM2-214ENST00000493387 SPATA16Q9BXB7 569 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 IL26Q9NPH9 171 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 RAB23Q9ULC3 237 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 CHMP2BQ9UQN3 213 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 KCTD3Q9Y597 815 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 SLC30A1Q9Y6M5 507 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 RPS6KL1Q9Y6S9 549 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 FAM169AQ9Y6X4 670 aa11.51□□□□□ -0.57
LSM2-214ENST00000493387 PRR5-ARHGAP8B1AHC4 643 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 MAGEC1O60732 1142 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 HOXC4P09017 264 aaPredicted RBP11.5□□□□□ -0.57
LSM2-214ENST00000493387 GNSP15586 552 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 ITGALP20701 1170 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 NMBRP28336 390 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 ECHS1P30084 290 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 HOXD12P35452 270 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 PPARGP37231 505 aaPredicted RBP11.5□□□□□ -0.57
LSM2-214ENST00000493387 GPR1P46091 355 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 DHPSP49366 369 aaPredicted RBP11.5□□□□□ -0.57
LSM2-214ENST00000493387 RACK1P63244 317 aaKnown RBP11.5□□□□□ -0.57
LSM2-214ENST00000493387 TMPRSS15P98073 1019 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 CACNG1Q06432 222 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 OVGP1Q12889 678 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 SRSF5Q13243 272 aaKnown RBP11.5□□□□□ -0.57
LSM2-214ENST00000493387 IRF4Q15306 451 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 LONRF1Q17RB8 773 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 GPR33Q49SQ1 333 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 LYPLAL1Q5VWZ2 237 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 ALS2CLQ60I27 953 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 STEAP4Q687X5 459 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 RAET1GQ6H3X3 334 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 PNCKQ6P2M8 343 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 ZNF449Q6P9G9 518 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 ADAMTSL4Q6UY14 1074 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 RABEPKQ7Z6M1 372 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 IQCHQ86VS3 1027 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 DCP2Q8IU60 420 aaKnown RBP11.5□□□□□ -0.57
LSM2-214ENST00000493387 SLC41A1Q8IVJ1 513 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 LMNTD2Q8IXW0 634 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 RGL4Q8IZJ4 473 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 DEFB119Q8N690 84 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 TMEM145Q8NBT3 493 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.5□□□□□ -0.57
LSM2-214ENST00000493387 GPR26Q8NDV2 337 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 OR13J1Q8NGT2 312 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 OR6P1Q8NGX9 317 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 ZNF398Q8TD17 642 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 CALML6Q8TD86 181 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 SCG3Q8WXD2 468 aaKnown RBP11.5□□□□□ -0.57
LSM2-214ENST00000493387 HDAC10Q969S8 669 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 ZNF669Q96BR6 464 aaPredicted RBP11.5□□□□□ -0.57
LSM2-214ENST00000493387 ULK4Q96C45 1275 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 MFSD3Q96ES6 412 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 TBATAQ96M53 351 aa11.5□□□□□ -0.57
LSM2-214ENST00000493387 KLF6Q99612 283 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms