RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 DGKAP23743 735 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 TEAD1P28347 426 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 ADRA1AP35348 466 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 CDK3Q00526 305 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 PPARDQ03181 441 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 OLIG2Q13516 323 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 ALS2CLQ60I27 953 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 RANBP10Q6VN20 620 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 GSTA5Q7RTV2 222 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 GLT6D1Q7Z4J2 308 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 TMC3Q7Z5M5 1100 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 NLRP8Q86W28 1048 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 PHACTR4Q8IZ21 702 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 COG1Q8WTW3 980 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 BTN2A2Q8WVV5 523 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 EID2BQ96D98 161 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 RIOK2Q9BVS4 552 aaKnown RBP12.74□□□□□ -0.37
CLIP2-209ENST00000493166 TEX101Q9BY14 249 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 SLC13A1Q9BZW2 595 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 FAM83DQ9H4H8 585 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 CAAP1Q9H8G2 361 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 LRRC40Q9H9A6 602 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 RAD18Q9NS91 495 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 KLQ9UEF7 1012 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 KLF15Q9UIH9 416 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 PCOLCE2Q9UKZ9 415 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 TTC7AQ9ULT0 858 aaPredicted RBP12.74□□□□□ -0.37
CLIP2-209ENST00000493166 DRG1Q9Y295 367 aaKnown RBP12.74□□□□□ -0.37
CLIP2-209ENST00000493166 SPTBN2O15020 2390 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 TMEM202A6NGA9 273 aa12.73□□□□□ -0.37
CLIP2-209ENST00000493166 CES2O00748 559 aa12.73□□□□□ -0.37
CLIP2-209ENST00000493166 GIPC1O14908 333 aa12.73□□□□□ -0.37
CLIP2-209ENST00000493166 AURKAO14965 403 aa12.73□□□□□ -0.37
CLIP2-209ENST00000493166 PSMD3O43242 534 aa12.73□□□□□ -0.37
CLIP2-209ENST00000493166 RASGRP1O95267 797 aa12.73□□□□□ -0.37
CLIP2-209ENST00000493166 SOD1P00441 154 aa12.73□□□□□ -0.37
CLIP2-209ENST00000493166 ETS1P14921 441 aa12.73□□□□□ -0.37
CLIP2-209ENST00000493166 TCP1P17987 556 aaKnown RBP12.73□□□□□ -0.37
CLIP2-209ENST00000493166 FDFT1P37268 417 aa12.73□□□□□ -0.37
CLIP2-209ENST00000493166 KCNJ1P48048 391 aa12.73□□□□□ -0.37
CLIP2-209ENST00000493166 LMAN1P49257 510 aa12.73□□□□□ -0.37
CLIP2-209ENST00000493166 BLKP51451 505 aa12.73□□□□□ -0.37
CLIP2-209ENST00000493166 SRP54P61011 504 aaKnown RBP12.73□□□□□ -0.37
CLIP2-209ENST00000493166 SPARCL1Q14515 664 aa12.73□□□□□ -0.37
CLIP2-209ENST00000493166 ALG11Q2TAA5 492 aa12.73□□□□□ -0.37
CLIP2-209ENST00000493166 HENMT1Q5T8I9 393 aaKnown RBP12.73□□□□□ -0.37
CLIP2-209ENST00000493166 KCTD11Q693B1 232 aa12.73□□□□□ -0.37
CLIP2-209ENST00000493166 ADAMTSL4Q6UY14 1074 aa12.73□□□□□ -0.37
CLIP2-209ENST00000493166 KANSL1Q7Z3B3 1105 aa12.73□□□□□ -0.37
CLIP2-209ENST00000493166 HID1Q8IV36 788 aa12.73□□□□□ -0.37
CLIP2-209ENST00000493166 KLHDC8BQ8IXV7 354 aa12.73□□□□□ -0.37
CLIP2-209ENST00000493166 RBFAQ8N0V3 343 aa12.73□□□□□ -0.37
CLIP2-209ENST00000493166 EID2Q8N6I1 236 aa12.73□□□□□ -0.37
CLIP2-209ENST00000493166 PDCD7Q8N8D1 485 aaKnown RBP12.73□□□□□ -0.37
CLIP2-209ENST00000493166 PRELID2Q8N945 189 aa12.73□□□□□ -0.37
CLIP2-209ENST00000493166 ZNF548Q8NEK5 533 aaPredicted RBP12.73□□□□□ -0.37
CLIP2-209ENST00000493166 OR56A4Q8NGH8 313 aa12.73□□□□□ -0.37
CLIP2-209ENST00000493166 TSACCQ96A04 125 aaPredicted RBP12.73□□□□□ -0.37
CLIP2-209ENST00000493166 WDR24Q96S15 920 aa12.73□□□□□ -0.37
CLIP2-209ENST00000493166 AGAP2Q99490 1192 aa12.73□□□□□ -0.37
CLIP2-209ENST00000493166 CDC6Q99741 560 aa12.73□□□□□ -0.37
CLIP2-209ENST00000493166 NAPGQ99747 312 aaPredicted RBP12.73□□□□□ -0.37
CLIP2-209ENST00000493166 LGR4Q9BXB1 951 aa12.73□□□□□ -0.37
CLIP2-209ENST00000493166 AP1M1Q9BXS5 423 aa12.73□□□□□ -0.37
CLIP2-209ENST00000493166 CDH19Q9H159 772 aa12.73□□□□□ -0.37
CLIP2-209ENST00000493166 UCKL1Q9NWZ5 548 aa12.73□□□□□ -0.37
CLIP2-209ENST00000493166 PAK5Q9P286 719 aa12.73□□□□□ -0.37
CLIP2-209ENST00000493166 SPASTQ9UBP0 616 aa12.73□□□□□ -0.37
CLIP2-209ENST00000493166 FEZ2Q9UHY8 353 aaPredicted RBP12.73□□□□□ -0.37
CLIP2-209ENST00000493166 PNMA8BQ9ULN7 279 aaPredicted RBP12.73□□□□□ -0.37
CLIP2-209ENST00000493166 ARHGEF17Q96PE2 2063 aaPredicted RBP12.73□□□□□ -0.37
CLIP2-209ENST00000493166 GOLGA6L10A0A0M3HER8 536 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 SPAARA0A1B0GVQ0 90 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 CTAGE9A4FU28 777 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 NEMP2A6NFY4 417 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 E7EVH7 732 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 TNFRSF10CO14798 259 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 ZNF185O15231 689 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 INPP4BO15327 924 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 FFAR2O15552 330 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 AQP9O43315 295 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 CBFA2T3O75081 653 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 AP2A1O95782 977 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 TNFP01375 233 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 ZSCAN5DPP0CG00 497 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 ALPPL2P10696 532 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 CTSEP14091 401 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 HMGCLP35914 325 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 HK3P52790 923 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 DCDC1P59894 354 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 TRIP6Q15654 476 aaKnown RBP12.72□□□□□ -0.37
CLIP2-209ENST00000493166 HS1BP3Q53T59 392 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 PRRT3Q5FWE3 981 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 RD3Q7Z3Z2 195 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 PRUNE1Q86TP1 453 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 C17orf53Q8N3J3 647 aaPredicted RBP12.72□□□□□ -0.37
CLIP2-209ENST00000493166 SLC25A45Q8N413 288 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 TTC30BQ8N4P2 665 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 GLIS1Q8NBF1 620 aa12.72□□□□□ -0.37
CLIP2-209ENST00000493166 GPR26Q8NDV2 337 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms