RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 SRMP19623 302 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 NT5EP21589 574 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 ITPKAP23677 461 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 HMOX2P30519 316 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 GRK4P32298 578 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 GTF2H1P32780 548 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 MC5RP33032 325 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 RYKP34925 604 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 SPAM1P38567 509 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 CRATP43155 626 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 KIR3DL2P43630 455 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 CEBPDP49716 269 aaPredicted RBP4.22□□□□□ -1.73
BRCA1-220ENST00000492859 IDH3AP50213 366 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 ZNF157P51786 506 aaPredicted RBP4.22□□□□□ -1.73
BRCA1-220ENST00000492859 BCAR1P56945 870 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 RPS16P62249 146 aaKnown RBP4.22□□□□□ -1.73
BRCA1-220ENST00000492859 ATP2C1P98194 919 aaPredicted RBP4.22□□□□□ -1.73
BRCA1-220ENST00000492859 GRIN1Q05586 938 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 CYP24A1Q07973 514 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 PPP3CAQ08209 521 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 MERTKQ12866 999 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 ALCAMQ13740 583 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 ZNF273Q14593 569 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 CERKLQ49MI3 558 aaPredicted RBP4.22□□□□□ -1.73
BRCA1-220ENST00000492859 EPC2Q52LR7 807 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 PDCD4Q53EL6 469 aaKnown RBP4.22□□□□□ -1.73
BRCA1-220ENST00000492859 CCDC157Q569K6 752 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 BEX5Q5H9J7 111 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 Q5PR19 223 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 DCST1Q5T197 706 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 SLC35F1Q5T1Q4 408 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 LRRC38Q5VT99 294 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 CST9LP1Q5W188 147 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 STEAP3Q658P3 488 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 SNRNP48Q6IEG0 339 aaKnown RBP4.22□□□□□ -1.73
BRCA1-220ENST00000492859 OR6B2Q6IFH4 312 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 PSAPL1Q6NUJ1 521 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 TTI2Q6NXR4 508 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 TTC27Q6P3X3 843 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 KLHL35Q6PF15 583 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 FBXO46Q6PJ61 603 aaPredicted RBP4.22□□□□□ -1.73
BRCA1-220ENST00000492859 RBPMS2Q6ZRY4 209 aaKnown RBP4.22□□□□□ -1.73
BRCA1-220ENST00000492859 ANO5Q75V66 913 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 LRRC8DQ7L1W4 858 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 LRRC70Q7Z2Q7 622 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 PHLDB2Q86SQ0 1253 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 DHX40Q8IX18 779 aaKnown RBP4.22□□□□□ -1.73
BRCA1-220ENST00000492859 KATNAL2Q8IYT4 538 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 FSTL5Q8N475 847 aaPredicted RBP4.22□□□□□ -1.73
BRCA1-220ENST00000492859 LEMD2Q8NC56 503 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 DBF4BQ8NFT6 615 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 PCDH19Q8TAB3 1148 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 NDNFQ8TB73 568 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 ZNF596Q8TC21 504 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 HCAR2Q8TDS4 363 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 DQX1Q8TE96 717 aaKnown RBP4.22□□□□□ -1.73
BRCA1-220ENST00000492859 ATP8B4Q8TF62 1192 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 ING5Q8WYH8 240 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 KAT5Q92993 513 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 RAB24Q969Q5 203 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 RGMAQ96B86 450 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 C5orf30Q96GV9 206 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 SERAC1Q96JX3 654 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 SNX22Q96L94 193 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 CCDC17Q96LX7 622 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 FBXL18Q96ME1 805 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 TBC1D32Q96NH3 1257 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 CNTNAP3BQ96NU0 1288 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 INPP4AQ96PE3 977 aaPredicted RBP4.22□□□□□ -1.73
BRCA1-220ENST00000492859 ZNF317Q96PQ6 595 aaPredicted RBP4.22□□□□□ -1.73
BRCA1-220ENST00000492859 FIZ1Q96SL8 496 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 DHRS9Q9BPW9 319 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 BPIFA3Q9BQP9 254 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 CHID1Q9BWS9 393 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 SPATA16Q9BXB7 569 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 CNTNAP3Q9BZ76 1288 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 OSBPL8Q9BZF1 889 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 C6orf62Q9GZU0 229 aaPredicted RBP4.22□□□□□ -1.73
BRCA1-220ENST00000492859 P2RY12Q9H244 342 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 POLR1BQ9H9Y6 1135 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 ZFYVE1Q9HBF4 777 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 MRPS30Q9NP92 439 aaKnown RBP4.22□□□□□ -1.73
BRCA1-220ENST00000492859 TLR8Q9NR97 1041 aaKnown RBP4.22□□□□□ -1.73
BRCA1-220ENST00000492859 RAB6BQ9NRW1 208 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 ARL8BQ9NVJ2 186 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 ELOVL2Q9NXB9 296 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 GPN3Q9UHW5 284 aaPredicted RBP4.22□□□□□ -1.73
BRCA1-220ENST00000492859 ENOPH1Q9UHY7 261 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 SLC24A2Q9UI40 661 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 SLCO3A1Q9UIG8 710 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 LEF1Q9UJU2 399 aaPredicted RBP4.22□□□□□ -1.73
BRCA1-220ENST00000492859 OSGIN1Q9UJX0 560 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 GMEB2Q9UKD1 530 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 FBXW2Q9UKT8 454 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 PADI1Q9ULC6 663 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 CA14Q9ULX7 337 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 CYP8B1Q9UNU6 501 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 NSFL1CQ9UNZ2 370 aaKnown RBP4.22□□□□□ -1.73
BRCA1-220ENST00000492859 MTO1Q9Y2Z2 717 aaKnown RBP4.22□□□□□ -1.73
BRCA1-220ENST00000492859 FAM32AQ9Y421 112 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms