RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 ARMC12Q5T9G4 340 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 ADAMTSL4Q6UY14 1074 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 ARHGAP36Q6ZRI8 547 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 ZNF571Q7Z3V5 609 aaPredicted RBP9.11□□□□□ -0.95
HDAC3-212ENST00000492407 TECPR1Q7Z6L1 1165 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 HEATR4Q86WZ0 1026 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 NRSN1Q8IZ57 195 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 TEX26Q8N6G2 289 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 NIPA2Q8N8Q9 360 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 EXD3Q8N9H8 876 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 CCL4L1Q8NHW4 92 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 USP7Q93009 1102 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 ARHGAP9Q9BRR9 750 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 DDA1Q9BW61 102 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 ASPSCR1Q9BZE9 553 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 FAM117AQ9C073 453 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 ADNPQ9H2P0 1102 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 NOD2Q9HC29 1040 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 TAAR2Q9P1P5 351 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 PDP2Q9P2J9 529 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 MOSPD1Q9UJG1 213 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 RPL26L1Q9UNX3 145 aaKnown RBP9.11□□□□□ -0.95
HDAC3-212ENST00000492407 PCDHGC4Q9Y5F7 938 aa9.11□□□□□ -0.95
HDAC3-212ENST00000492407 HEMK1Q9Y5R4 338 aaPredicted RBP9.11□□□□□ -0.95
HDAC3-212ENST00000492407 COL6A6A6NMZ7 2263 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 IGHV5-10-1A0A0J9YXX1 117 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 RGSL1A5PLK6 1076 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 TMCO5BA8MYB1 307 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 B4E171 279 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 DDX3XO00571 662 aaKnown RBP eCLIP9.1□□□□□ -0.95
HDAC3-212ENST00000492407 SLC28A2O43868 658 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 ECEL1O95672 775 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 FUCA1P04066 466 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 CA4P22748 312 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 LHCGRP22888 699 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 ADCY8P40145 1251 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 ETV3P41162 512 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 TSPAN7P41732 249 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 MMP13P45452 471 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 FASLGP48023 281 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 OR1D5P58170 312 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 RAB15P59190 212 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 CTBSQ01459 385 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 BIRC2Q13490 618 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 C16orf72Q14CZ0 275 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 TGIF1Q15583 401 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 C11orf91Q3C1V1 193 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 CCDC183Q5T5S1 534 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 PHF19Q5T6S3 580 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 ALG1LQ6GMV1 187 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 ZNF574Q6ZN55 896 aaPredicted RBP9.1□□□□□ -0.95
HDAC3-212ENST00000492407 NYAP1Q6ZVC0 841 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 PGBD5Q8N414 524 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 ATPAF2Q8N5M1 289 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 AVL9Q8NBF6 648 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 AGBL5Q8NDL9 886 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 FAM71BQ8TC56 605 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 PIH1D2Q8WWB5 315 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 SYN2Q92777 582 aaPredicted RBP9.1□□□□□ -0.95
HDAC3-212ENST00000492407 ZNF653Q96CK0 615 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 IQCDQ96DY2 449 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 NSMCE3Q96MG7 304 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 CSPG4P5Q96PW8 444 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 TEFMQ96QE5 360 aaKnown RBP9.1□□□□□ -0.95
HDAC3-212ENST00000492407 ZPBPQ9BS86 351 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 SEMA6CQ9H3T2 930 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 VPS18Q9P253 973 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 IP6K2Q9UHH9 426 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 LCMT1Q9UIC8 334 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 TUBD1Q9UJT1 453 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 SUFUQ9UMX1 484 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 PCDHGA4Q9Y5G9 962 aa9.1□□□□□ -0.95
HDAC3-212ENST00000492407 IGHV1OR21-1A0A087WYE8 117 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 A0A1B0GTH6 734 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 A0A1W2PQJ5 194 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 NPIPB15A6NHN6 443 aaPredicted RBP9.09□□□□□ -0.95
HDAC3-212ENST00000492407 A8MX80 341 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 ATMINO43313 823 aaPredicted RBP9.09□□□□□ -0.95
HDAC3-212ENST00000492407 STK10O94804 968 aaKnown RBP9.09□□□□□ -0.95
HDAC3-212ENST00000492407 ZIC2O95409 532 aaPredicted RBP9.09□□□□□ -0.95
HDAC3-212ENST00000492407 RARAP10276 462 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 SLC2A4P14672 509 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 ITGB6P18564 788 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 ITIH1P19827 911 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 AMPD1P23109 780 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 IL1R2P27930 398 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 ALDH4A1P30038 563 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 CSTF2P33240 577 aaKnown RBP eCLIP9.09□□□□□ -0.95
HDAC3-212ENST00000492407 MAN1A1P33908 653 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 ETV5P41161 510 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 GPR1P46091 355 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 GNPDA1P46926 289 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 MAPK10P53779 464 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 PTSQ03393 145 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 TRAF2Q12933 501 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 TCEA2Q15560 299 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 TBR1Q16650 682 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 PYCR3Q53H96 274 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 RAET1GQ6H3X3 334 aa9.09□□□□□ -0.95
HDAC3-212ENST00000492407 TIGD7Q6NT04 549 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms