RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 SLC44A1Q8WWI5 657 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 INPP5DQ92835 1189 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 APBB2Q92870 758 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 KLHL29Q96CT2 875 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 OPTNQ96CV9 577 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 EID2BQ96D98 161 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 RMDN1Q96DB5 314 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 LRRC39Q96DD0 335 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 KTI12Q96EK9 354 aaPredicted RBP3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 NEIL1Q96FI4 390 aaPredicted RBP3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 CPB2Q96IY4 423 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 ZNF668Q96K58 619 aaPredicted RBP3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 SNX27Q96L92 541 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 LENG8Q96PV6 779 aaPredicted RBP3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 CDK15Q96Q40 435 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 PAFAH2Q99487 392 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 LBHD1Q9BQE6 289 aaPredicted RBP3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 ZNF670Q9BS34 389 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 C11orf84Q9BUA3 381 aaPredicted RBP3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 HERC2P3Q9BVR0 1158 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 KLHL4Q9C0H6 718 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 ABCG8Q9H221 673 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 ADAMTS10Q9H324 1103 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 ABHD16BQ9H3Z7 469 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 EHD1Q9H4M9 534 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 C10orf88Q9H8K7 445 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 IPPKQ9H8X2 491 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 CHODLQ9H9P2 273 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 KIF9Q9HAQ2 790 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 POPDC2Q9HBU9 364 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 PCDH18Q9HCL0 1135 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 GP6Q9HCN6 339 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 BRD7Q9NPI1 651 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 NRIP3Q9NQ35 241 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 TRPV5Q9NQA5 729 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 PFDN4Q9NQP4 134 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 CATSPERZQ9NTU4 200 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 TXLNGQ9NUQ3 528 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 DPP3Q9NY33 737 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 SELENONQ9NZV5 590 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 MRPL15Q9P015 296 aaKnown RBP3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 SAE1Q9UBE0 346 aaPredicted RBP3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 MSRAQ9UJ68 235 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 ADAM30Q9UKF2 790 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 TSPAN16Q9UKR8 245 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 GPR55Q9Y2T6 319 aaPredicted RBP3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 FCF1Q9Y324 198 aaKnown RBP3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 PTPRFP10586 1907 aa3.81□□□□□ -1.8
ATPAF1-206ENST00000492233 TRAV34A0A0B4J273 112 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 A0A1W2PQ09 198 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 TCRBV9S1A1TA0A576 114 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 MBLAC1A4D2B0 266 aaPredicted RBP3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 KBTBD13C9JR72 458 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 GOLGA8MH3BSY2 632 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 H7C0C1 242 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 PIRO00625 290 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 TRAFD1O14545 582 aaPredicted RBP3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 DVL2O14641 736 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 KLF11O14901 512 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 ATXN7O15265 892 aaPredicted RBP3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 PAPSS1O43252 624 aaPredicted RBP3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 STRNO43815 780 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 CSDE1O75534 798 aaKnown RBP3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 DAB1O75553 588 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 GCATO75600 419 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 ZNF189O75820 626 aaPredicted RBP3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 ACTL6BO94805 426 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 CSPG5O95196 566 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 VTNP04004 478 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 TK1P04183 234 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 CLEC3BP05452 202 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 LPLP06858 475 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 TPOP07202 933 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 ASGR1P07306 291 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 MMP3P08254 477 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 INHBAP08476 426 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 TROVE2P10155 538 aaKnown RBP eCLIP3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 UBL4AP11441 157 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 COL6A2P12110 1019 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 PRG2P13727 222 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 CSF2RAP15509 400 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 KRT4P19013 534 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 TYMPP19971 482 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 CDH3P22223 829 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 ADRA1DP25100 572 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 NFKBIAP25963 317 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 RBL1P28749 1068 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 ADORA2AP29274 412 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 AXLP30530 894 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 ALDH3A1P30838 453 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 GRK5P34947 590 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 GPC1P35052 558 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 PGM1P36871 562 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 ELK3P41970 407 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 ACADSBP45954 432 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 GCLCP48506 637 aaPredicted RBP3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 RGS7P49802 495 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 BCAT1P54687 386 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 PTPN5P54829 565 aa3.8□□□□□ -1.8
ATPAF1-206ENST00000492233 HDAC4P56524 1084 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms