RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 NRSN1Q8IZ57 195 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 NAGSQ8N159 534 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 ZNF843Q8N446 348 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 FBXO39Q8N4B4 442 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 ZNF564Q8TBZ8 553 aaPredicted RBP8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 NSMCE1Q8WV22 266 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 CPLX3Q8WVH0 158 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 TADA1Q96BN2 335 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 HDAC11Q96DB2 347 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 RNF157Q96PX1 679 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 TDRD1Q9BXT4 1180 aaKnown RBP8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 GSDMCQ9BYG8 508 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 STRADBQ9C0K7 418 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 CPNE5Q9HCH3 593 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 NT5MQ9NPB1 228 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 RBM22Q9NW64 420 aaKnown RBP eCLIP8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 IFNKQ9P0W0 207 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 TAAR2Q9P1P5 351 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 PDP2Q9P2J9 529 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 DNPEPQ9ULA0 475 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 ATXN7L1Q9ULK2 861 aaPredicted RBP8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 CNOT6Q9ULM6 557 aaKnown RBP8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 SUFUQ9UMX1 484 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 SPTA1P02549 2419 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 SDK2Q58EX2 2172 aa8.35□□□□□ -1.07
SMARCB1-207ENST00000491967 A0A0U1RQS6 177 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 RGSL1A5PLK6 1076 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 CAPN8A6NHC0 703 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 PPM1DO15297 605 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 DNAJC6O75061 913 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 PRB1P04280 392 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 PYGLP06737 847 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 KRT7P08729 469 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 H2AFZP0C0S5 128 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 TMEM253P0C7T8 217 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 KRT10P13645 584 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 MX2P20592 715 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 KDELR1P24390 212 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 CD1CP29017 333 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 ADCY8P40145 1251 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 ARHGAP25P42331 645 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 FASLGP48023 281 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 POLD2P49005 469 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 IFI35P80217 286 aaPredicted RBP8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 CTBSQ01459 385 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 DSC2Q02487 901 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 GBE1Q04446 702 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 PPIDQ08752 370 aaKnown RBP8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 C19orf57Q0VDD7 668 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 ILF3Q12906 894 aaKnown RBP eCLIP8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 PEX6Q13608 980 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 LRP8Q14114 963 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 KRT81Q14533 505 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 TCEA2Q15560 299 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 NFKBIBQ15653 356 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 HENMT1Q5T8I9 393 aaKnown RBP8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 LRRC38Q5VT99 294 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 SLC9A4Q6AI14 798 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 H2AFVQ71UI9 128 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 NDUFAF2Q8N183 169 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 PLD5Q8N7P1 536 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 CNTD1Q8N815 330 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 KCTD6Q8NC69 237 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 OR8K1Q8NGG5 319 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 KIAA1524Q8TCG1 905 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 PDCD6IPQ8WUM4 868 aaKnown RBP8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 RAPGEF5Q92565 580 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 SCAMP4Q969E2 229 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 AP2M1Q96CW1 435 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 EID2BQ96D98 161 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 NAF1Q96HR8 494 aaKnown RBP8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 SMIM14Q96QK8 99 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 TRIB3Q96RU7 358 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 AGAP2Q99490 1192 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 PACSIN1Q9BY11 444 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 FOXP3Q9BZS1 431 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 XPO4Q9C0E2 1151 aaKnown RBP8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 DPEP2Q9H4A9 486 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 CARS2Q9HA77 564 aaKnown RBP8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 DTLQ9NZJ0 730 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 VPS18Q9P253 973 aa8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 FLNBO75369 2602 aaKnown RBP8.34□□□□□ -1.07
SMARCB1-207ENST00000491967 A6NCN8 305 aa8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 PRR19A6NJB7 356 aa8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 ANKRD66B4E2M5 251 aa8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 HGSO14964 777 aaPredicted RBP8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 ECEL1O95672 775 aa8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 CPNE6O95741 557 aa8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 HLA-DQB2P05538 268 aa8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 CTPS1P17812 591 aa8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 AK4P27144 223 aaPredicted RBP8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 MAZP56270 477 aaKnown RBP8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 CFHR1Q03591 330 aa8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 ARHGEF7Q14155 803 aa8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 SLC14A2Q15849 920 aa8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 TAZQ16635 292 aa8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 QPCTQ16769 361 aa8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 ZSCAN23Q3MJ62 389 aa8.33□□□□□ -1.08
SMARCB1-207ENST00000491967 ARHGAP40Q5TG30 622 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms