RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 ACOX1Q15067 660 aa21.68■■□□□ 1.06
VCPKMT-204ENST00000491402 ANGPT1Q15389 498 aa21.68■■□□□ 1.06
VCPKMT-204ENST00000491402 GPR26Q8NDV2 337 aa21.68■■□□□ 1.06
VCPKMT-204ENST00000491402 CYTH2Q99418 400 aa21.68■■□□□ 1.06
VCPKMT-204ENST00000491402 IL26Q9NPH9 171 aa21.68■■□□□ 1.06
VCPKMT-204ENST00000491402 SMYD2Q9NRG4 433 aa21.68■■□□□ 1.06
VCPKMT-204ENST00000491402 ZNF446Q9NWS9 450 aa21.68■■□□□ 1.06
VCPKMT-204ENST00000491402 COQ6Q9Y2Z9 468 aa21.68■■□□□ 1.06
VCPKMT-204ENST00000491402 FAM159BA6NKW6 160 aa21.67■■□□□ 1.06
VCPKMT-204ENST00000491402 GALR2O43603 387 aaPredicted RBP21.67■■□□□ 1.06
VCPKMT-204ENST00000491402 SPAM1P38567 509 aa21.67■■□□□ 1.06
VCPKMT-204ENST00000491402 XIAPP98170 497 aa21.67■■□□□ 1.06
VCPKMT-204ENST00000491402 PEX6Q13608 980 aa21.67■■□□□ 1.06
VCPKMT-204ENST00000491402 EFTUD2Q15029 972 aaKnown RBP eCLIP21.67■■□□□ 1.064e-6■■■□□ 14.8
VCPKMT-204ENST00000491402 ZDHHC20Q5W0Z9 365 aa21.67■■□□□ 1.06
VCPKMT-204ENST00000491402 AFTPHQ6ULP2 937 aa21.67■■□□□ 1.06
VCPKMT-204ENST00000491402 FAM151BQ6UXP7 276 aa21.67■■□□□ 1.06
VCPKMT-204ENST00000491402 PTAR1Q7Z6K3 402 aaPredicted RBP21.67■■□□□ 1.06
VCPKMT-204ENST00000491402 TECPR1Q7Z6L1 1165 aa21.67■■□□□ 1.06
VCPKMT-204ENST00000491402 RAVER1Q8IY67 606 aaKnown RBP21.67■■□□□ 1.06
VCPKMT-204ENST00000491402 OR2W6PQ8NHA6 318 aa21.67■■□□□ 1.06
VCPKMT-204ENST00000491402 COQ10AQ96MF6 247 aa21.67■■□□□ 1.06
VCPKMT-204ENST00000491402 PLEKHG4BQ96PX9 1271 aa21.67■■□□□ 1.06
VCPKMT-204ENST00000491402 TPSD1Q9BZJ3 242 aa21.67■■□□□ 1.06
VCPKMT-204ENST00000491402 KDM4CQ9H3R0 1056 aa21.67■■□□□ 1.06
VCPKMT-204ENST00000491402 PREBQ9HCU5 417 aa21.67■■□□□ 1.06
VCPKMT-204ENST00000491402 ZFATQ9P243 1243 aa21.67■■□□□ 1.06
VCPKMT-204ENST00000491402 CD84Q9UIB8 345 aa21.67■■□□□ 1.06
VCPKMT-204ENST00000491402 FBXO4Q9UKT5 387 aa21.67■■□□□ 1.06
VCPKMT-204ENST00000491402 EXOC1LA0A1B0GW35 172 aa21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 CXorf49A8MYA2 514 aaPredicted RBP21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 GAPDHSO14556 408 aaPredicted RBP21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 WNT9AO14904 365 aa21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 TDGF1P13385 188 aa21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 MC4RP32245 332 aa21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 ACSL1P33121 698 aa21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 DCDC1P59894 354 aa21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 CREB5Q02930 508 aa21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 OR4L1Q8NH43 312 aa21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 CDKL2Q92772 493 aa21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 SGSM3Q96HU1 749 aa21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 BTBD1Q9H0C5 482 aa21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 APPL1Q9UKG1 709 aa21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 NFS1Q9Y697 457 aa21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 GLYATL1P3A0A0U1RQE8 302 aa21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 RGSL1A5PLK6 1076 aa21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 PRR23AA6NEV1 266 aa21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 RECQL5O94762 991 aaPredicted RBP21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 PRAMEF1O95521 474 aa21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 THOC5Q13769 683 aaKnown RBP21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 STAT4Q14765 748 aa21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 KLHL38Q2WGJ6 581 aa21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 ALS2CLQ60I27 953 aa21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 NEPROQ6NW34 567 aa21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 CYP2U1Q7Z449 544 aa21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 DTD2Q96FN9 168 aa21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 ZIM3Q96PE6 472 aa21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 AGAP2Q99490 1192 aa21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 CDH19Q9H159 772 aa21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 SGK2Q9HBY8 427 aa21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 IARS2Q9NSE4 1012 aaKnown RBP21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 SLC17A6Q9P2U8 582 aa21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 NFKBIL1Q9UBC1 381 aaPredicted RBP21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 CYP8B1Q9UNU6 501 aa21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 ZFR2Q9UPR6 939 aaKnown RBP21.66■■□□□ 1.06
VCPKMT-204ENST00000491402 TBC1D3DA0A087WVF3 549 aa21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 TBC1D3IA0A087WXS9 549 aa21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 TBC1D3EA0A087X179 549 aa21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 TBC1D3KA0A087X1G2 549 aa21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 TBC1D3FA6NER0 549 aaPredicted RBP21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 IGLON5A6NGN9 336 aa21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 FAM47DPA6NHR8 397 aa21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 TBC1D3LB9A6J9 549 aa21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 LZTS3O60299 673 aaPredicted RBP21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 ZNF217O75362 1048 aa21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 SRP72O76094 671 aaKnown RBP21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 TBC1D3HP0C7X1 549 aa21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 HOXA6P31267 233 aa21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 FNTBP49356 437 aa21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 NUBP1P53384 320 aa21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 PTPN5P54829 565 aa21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 RPS21P63220 83 aaKnown RBP21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 IFFO1Q0D2I5 559 aa21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 TEDDM1Q5T9Z0 273 aa21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 SEL1L3Q68CR1 1132 aa21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 TBC1D3GQ6DHY5 549 aa21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 ZNF470Q6ECI4 717 aa21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 TBC1D3CQ6IPX1 549 aa21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 KIAA1161Q6NSJ0 714 aa21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 CNTN4Q8IWV2 1026 aa21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 CTAGE3PQ8IX95 158 aa21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 NRSN1Q8IZ57 195 aa21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 TBC1D3Q8IZP1 549 aaPredicted RBP21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 SCAMP4Q969E2 229 aa21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 CCDC77Q9BR77 488 aa21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 FAM167BQ9BTA0 163 aa21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 FAM83DQ9H4H8 585 aa21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 RAD18Q9NS91 495 aa21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 VPS18Q9P253 973 aa21.65■■□□□ 1.06
VCPKMT-204ENST00000491402 AXIN1O15169 862 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms