RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 NLRP8Q86W28 1048 aa31.25■■■□□ 2.59
LDB1-204ENST00000490751 GPBAR1Q8TDU6 330 aa31.25■■■□□ 2.59
LDB1-204ENST00000490751 GRAMD1AQ96CP6 724 aa31.25■■■□□ 2.59
LDB1-204ENST00000490751 MRFAP1L1Q96HT8 127 aa31.25■■■□□ 2.59
LDB1-204ENST00000490751 AGAP3Q96P47 875 aa31.25■■■□□ 2.59
LDB1-204ENST00000490751 AGAP2Q99490 1192 aa31.25■■■□□ 2.59
LDB1-204ENST00000490751 BRD8Q9H0E9 1235 aa31.25■■■□□ 2.59
LDB1-204ENST00000490751 POLR1BQ9H9Y6 1135 aa31.25■■■□□ 2.59
LDB1-204ENST00000490751 SLC17A4Q9Y2C5 497 aa31.25■■■□□ 2.59
LDB1-204ENST00000490751 ZFYVE26Q68DK2 2539 aa31.25■■■□□ 2.59
LDB1-204ENST00000490751 C1orf232A0A0U1RR37 186 aa31.24■■■□□ 2.59
LDB1-204ENST00000490751 NTN3O00634 580 aaPredicted RBP31.24■■■□□ 2.59
LDB1-204ENST00000490751 LSSP48449 732 aa31.24■■■□□ 2.59
LDB1-204ENST00000490751 TFDP2Q14188 446 aa31.24■■■□□ 2.59
LDB1-204ENST00000490751 LLGL1Q15334 1064 aa31.24■■■□□ 2.59
LDB1-204ENST00000490751 C3orf38Q5JPI3 329 aa31.24■■■□□ 2.59
LDB1-204ENST00000490751 SPOCD1Q6ZMY3 1216 aa31.24■■■□□ 2.59
LDB1-204ENST00000490751 NRSN1Q8IZ57 195 aa31.24■■■□□ 2.59
LDB1-204ENST00000490751 MLPHQ9BV36 600 aaPredicted RBP31.24■■■□□ 2.59
LDB1-204ENST00000490751 GSDMCQ9BYG8 508 aa31.24■■■□□ 2.59
LDB1-204ENST00000490751 LUC7LQ9NQ29 371 aaKnown RBP31.24■■■□□ 2.59
LDB1-204ENST00000490751 TRNAU1APQ9NX07 287 aaKnown RBP31.24■■■□□ 2.59
LDB1-204ENST00000490751 ANKRD66B4E2M5 251 aa31.23■■■□□ 2.59
LDB1-204ENST00000490751 PYGLP06737 847 aa31.23■■■□□ 2.59
LDB1-204ENST00000490751 IVLP07476 585 aa31.23■■■□□ 2.59
LDB1-204ENST00000490751 ABCG1P45844 678 aa31.23■■■□□ 2.59
LDB1-204ENST00000490751 PDX1P52945 283 aa31.23■■■□□ 2.59
LDB1-204ENST00000490751 ILF3Q12906 894 aaKnown RBP eCLIP31.23■■■□□ 2.59
LDB1-204ENST00000490751 GALNT3Q14435 633 aa31.23■■■□□ 2.59
LDB1-204ENST00000490751 C14orf28Q4W4Y0 310 aa31.23■■■□□ 2.59
LDB1-204ENST00000490751 CERCAMQ5T4B2 595 aa31.23■■■□□ 2.59
LDB1-204ENST00000490751 KAZNQ674X7 775 aa31.23■■■□□ 2.59
LDB1-204ENST00000490751 LRRC69Q6ZNQ3 347 aa31.23■■■□□ 2.59
LDB1-204ENST00000490751 TRIM74Q86UV6 250 aa31.23■■■□□ 2.59
LDB1-204ENST00000490751 NT5DC3Q86UY8 548 aa31.23■■■□□ 2.59
LDB1-204ENST00000490751 NRROSQ86YC3 692 aa31.23■■■□□ 2.59
LDB1-204ENST00000490751 RAVER1Q8IY67 606 aaKnown RBP31.23■■■□□ 2.59
LDB1-204ENST00000490751 LSMEM2Q8N112 164 aa31.23■■■□□ 2.59
LDB1-204ENST00000490751 IMP4Q96G21 291 aaKnown RBP31.23■■■□□ 2.59
LDB1-204ENST00000490751 RIOK2Q9BVS4 552 aaKnown RBP31.23■■■□□ 2.59
LDB1-204ENST00000490751 ADGRE3Q9BY15 652 aa31.23■■■□□ 2.59
LDB1-204ENST00000490751 SAE1Q9UBE0 346 aaPredicted RBP31.23■■■□□ 2.59
LDB1-204ENST00000490751 SATB2Q9UPW6 733 aa31.23■■■□□ 2.59
LDB1-204ENST00000490751 ITPR1Q14643 2758 aa31.22■■■□□ 2.59
LDB1-204ENST00000490751 A0A0A6YYK5 440 aaPredicted RBP31.22■■■□□ 2.59
LDB1-204ENST00000490751 RRP8O43159 456 aaKnown RBP31.22■■■□□ 2.59
LDB1-204ENST00000490751 CST8O60676 142 aa31.22■■■□□ 2.59
LDB1-204ENST00000490751 RPLP0P05388 317 aaKnown RBP31.22■■■□□ 2.59
LDB1-204ENST00000490751 GLB1P16278 677 aa31.22■■■□□ 2.59
LDB1-204ENST00000490751 NR2C2P49116 596 aa31.22■■■□□ 2.59
LDB1-204ENST00000490751 CCL7P80098 99 aa31.22■■■□□ 2.59
LDB1-204ENST00000490751 PDZD3Q86UT5 571 aa31.22■■■□□ 2.59
LDB1-204ENST00000490751 KIAA1524Q8TCG1 905 aa31.22■■■□□ 2.59
LDB1-204ENST00000490751 ZNF578Q96N58 590 aaPredicted RBP31.22■■■□□ 2.59
LDB1-204ENST00000490751 PANX2Q96RD6 677 aa31.22■■■□□ 2.59
LDB1-204ENST00000490751 SLC25A51Q9H1U9 297 aa31.22■■■□□ 2.59
LDB1-204ENST00000490751 SPATS2LQ9NUQ6 558 aaKnown RBP31.22■■■□□ 2.59
LDB1-204ENST00000490751 TMEM98Q9Y2Y6 226 aa31.22■■■□□ 2.59
LDB1-204ENST00000490751 KIF26BQ2KJY2 2108 aa31.21■■■□□ 2.59
LDB1-204ENST00000490751 A0A1W2PNU3 283 aaPredicted RBP31.21■■■□□ 2.59
LDB1-204ENST00000490751 DXOO77932 396 aaKnown RBP31.21■■■□□ 2.59
LDB1-204ENST00000490751 PECAM1P16284 738 aaPredicted RBP31.21■■■□□ 2.59
LDB1-204ENST00000490751 AK4P27144 223 aaPredicted RBP31.21■■■□□ 2.59
LDB1-204ENST00000490751 ITPKBP27987 946 aa31.21■■■□□ 2.59
LDB1-204ENST00000490751 MARCKSL1P49006 195 aa31.21■■■□□ 2.59
LDB1-204ENST00000490751 HLTFQ14527 1009 aaKnown RBP eCLIP31.21■■■□□ 2.59
LDB1-204ENST00000490751 C11orf63Q6NUN7 778 aa31.21■■■□□ 2.59
LDB1-204ENST00000490751 BZW1Q7L1Q6 419 aaKnown RBP31.21■■■□□ 2.59
LDB1-204ENST00000490751 KATNAL2Q8IYT4 538 aa31.21■■■□□ 2.59
LDB1-204ENST00000490751 HIC2Q96JB3 615 aa31.21■■■□□ 2.59
LDB1-204ENST00000490751 GFM1Q96RP9 751 aaKnown RBP31.21■■■□□ 2.59
LDB1-204ENST00000490751 RNF215Q9Y6U7 377 aa31.21■■■□□ 2.59
LDB1-204ENST00000490751 A0A1W2PQM1 296 aa31.2■■■□□ 2.59
LDB1-204ENST00000490751 SOWAHDA6NJG2 315 aa31.2■■■□□ 2.59
LDB1-204ENST00000490751 INPP4BO15327 924 aa31.2■■■□□ 2.59
LDB1-204ENST00000490751 SPINT3P49223 89 aa31.2■■■□□ 2.59
LDB1-204ENST00000490751 PRKD1Q15139 912 aaPredicted RBP31.2■■■□□ 2.59
LDB1-204ENST00000490751 TEX44Q53QW1 395 aa31.2■■■□□ 2.59
LDB1-204ENST00000490751 TFDP3Q5H9I0 405 aa31.2■■■□□ 2.59
LDB1-204ENST00000490751 KDELC2Q7Z4H8 507 aa31.2■■■□□ 2.59
LDB1-204ENST00000490751 CCNJLQ8IV13 435 aa31.2■■■□□ 2.59
LDB1-204ENST00000490751 EXD1Q8NHP7 514 aa31.2■■■□□ 2.59
LDB1-204ENST00000490751 CCHCR1Q8TD31 782 aa31.2■■■□□ 2.59
LDB1-204ENST00000490751 SCARF2Q96GP6 870 aaPredicted RBP31.2■■■□□ 2.59
LDB1-204ENST00000490751 TRIB3Q96RU7 358 aa31.2■■■□□ 2.59
LDB1-204ENST00000490751 LRRN3Q9H3W5 708 aa31.2■■■□□ 2.59
LDB1-204ENST00000490751 PKD2L2Q9NZM6 624 aa31.2■■■□□ 2.59
LDB1-204ENST00000490751 TAAR2Q9P1P5 351 aa31.2■■■□□ 2.59
LDB1-204ENST00000490751 LRIT1Q9P2V4 623 aa31.2■■■□□ 2.59
LDB1-204ENST00000490751 APPL1Q9UKG1 709 aa31.2■■■□□ 2.59
LDB1-204ENST00000490751 EPN1Q9Y6I3 576 aaPredicted RBP31.2■■■□□ 2.59
LDB1-204ENST00000490751 D6RAR5 112 aa31.19■■■□□ 2.58
LDB1-204ENST00000490751 NDUFA10O95299 355 aa31.19■■■□□ 2.58
LDB1-204ENST00000490751 PTPN3P26045 913 aa31.19■■■□□ 2.58
LDB1-204ENST00000490751 ADCY8P40145 1251 aa31.19■■■□□ 2.58
LDB1-204ENST00000490751 CTBSQ01459 385 aa31.19■■■□□ 2.58
LDB1-204ENST00000490751 ADCY2Q08462 1091 aa31.19■■■□□ 2.58
LDB1-204ENST00000490751 PCSK7Q16549 785 aa31.19■■■□□ 2.58
LDB1-204ENST00000490751 SLC30A9Q6PML9 568 aa31.19■■■□□ 2.58
LDB1-204ENST00000490751 CCDC50Q8IVM0 306 aa31.19■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms