RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 RAPSNQ13702 412 aa13.6□□□□□ -0.23
EXOSC3-207ENST00000490516 LAMB3Q13751 1172 aa13.6□□□□□ -0.23
EXOSC3-207ENST00000490516 CYTH1Q15438 398 aa13.6□□□□□ -0.23
EXOSC3-207ENST00000490516 SLC25A52Q3SY17 297 aa13.6□□□□□ -0.23
EXOSC3-207ENST00000490516 C8orf34Q49A92 452 aa13.6□□□□□ -0.23
EXOSC3-207ENST00000490516 PTPN20Q4JDL3 420 aa13.6□□□□□ -0.23
EXOSC3-207ENST00000490516 MANEALQ5VSG8 457 aa13.6□□□□□ -0.23
EXOSC3-207ENST00000490516 AFMIDQ63HM1 303 aa13.6□□□□□ -0.23
EXOSC3-207ENST00000490516 DNAAF5Q86Y56 855 aa13.6□□□□□ -0.23
EXOSC3-207ENST00000490516 HPS6Q86YV9 775 aa13.6□□□□□ -0.23
EXOSC3-207ENST00000490516 SEC14L1Q92503 715 aa13.6□□□□□ -0.23
EXOSC3-207ENST00000490516 TBC1D10AQ9BXI6 508 aa13.6□□□□□ -0.23
EXOSC3-207ENST00000490516 MAGEB5Q9BZ81 275 aa13.6□□□□□ -0.23
EXOSC3-207ENST00000490516 SYNCQ9H7C4 482 aa13.6□□□□□ -0.23
EXOSC3-207ENST00000490516 TMEM248Q9NWD8 314 aa13.6□□□□□ -0.23
EXOSC3-207ENST00000490516 OSGIN2Q9Y236 505 aa13.6□□□□□ -0.23
EXOSC3-207ENST00000490516 SLC17A4Q9Y2C5 497 aa13.6□□□□□ -0.23
EXOSC3-207ENST00000490516 FER1L5A0AVI2 2057 aa13.6□□□□□ -0.23
EXOSC3-207ENST00000490516 MN1Q10571 1320 aaPredicted RBP13.6□□□□□ -0.23
EXOSC3-207ENST00000490516 PIKFYVEQ9Y2I7 2098 aa13.59□□□□□ -0.23
EXOSC3-207ENST00000490516 FAM72CH0Y354 149 aa13.59□□□□□ -0.23
EXOSC3-207ENST00000490516 PMM2O15305 246 aa13.59□□□□□ -0.23
EXOSC3-207ENST00000490516 IVLP07476 585 aa13.59□□□□□ -0.23
EXOSC3-207ENST00000490516 PLEKP08567 350 aaPredicted RBP13.59□□□□□ -0.23
EXOSC3-207ENST00000490516 FKBP3Q00688 224 aaKnown RBP13.59□□□□□ -0.23
EXOSC3-207ENST00000490516 IL11RAQ14626 422 aa13.59□□□□□ -0.23
EXOSC3-207ENST00000490516 RAB6CQ53S08 254 aa13.59□□□□□ -0.23
EXOSC3-207ENST00000490516 INO80DQ53TQ3 878 aaPredicted RBP13.59□□□□□ -0.23
EXOSC3-207ENST00000490516 FAM72AQ5TYM5 149 aa13.59□□□□□ -0.23
EXOSC3-207ENST00000490516 FAM72DQ6L9T8 149 aa13.59□□□□□ -0.23
EXOSC3-207ENST00000490516 TRNP1Q6NT89 227 aa13.59□□□□□ -0.23
EXOSC3-207ENST00000490516 ZNF517Q6ZMY9 492 aaPredicted RBP13.59□□□□□ -0.23
EXOSC3-207ENST00000490516 DPPA4Q7L190 304 aa13.59□□□□□ -0.23
EXOSC3-207ENST00000490516 SYVN1Q86TM6 617 aa13.59□□□□□ -0.23
EXOSC3-207ENST00000490516 FAM72BQ86X60 149 aa13.59□□□□□ -0.23
EXOSC3-207ENST00000490516 EHBP1Q8NDI1 1231 aa13.59□□□□□ -0.23
EXOSC3-207ENST00000490516 CASKIN2Q8WXE0 1202 aa13.59□□□□□ -0.23
EXOSC3-207ENST00000490516 NUS1Q96E22 293 aa13.59□□□□□ -0.23
EXOSC3-207ENST00000490516 C9orf72Q96LT7 481 aa13.59□□□□□ -0.23
EXOSC3-207ENST00000490516 COQ10AQ96MF6 247 aa13.59□□□□□ -0.23
EXOSC3-207ENST00000490516 ZNF641Q96N77 438 aaPredicted RBP13.59□□□□□ -0.23
EXOSC3-207ENST00000490516 OR2M4Q96R27 311 aa13.59□□□□□ -0.23
EXOSC3-207ENST00000490516 RAB6CQ9H0N0 254 aa13.59□□□□□ -0.23
EXOSC3-207ENST00000490516 NOL6Q9H6R4 1146 aaKnown RBP13.59□□□□□ -0.23
EXOSC3-207ENST00000490516 COPG2Q9UBF2 871 aa13.59□□□□□ -0.23
EXOSC3-207ENST00000490516 OR12D3Q9UGF7 316 aa13.59□□□□□ -0.23
EXOSC3-207ENST00000490516 USP25Q9UHP3 1055 aa13.59□□□□□ -0.23
EXOSC3-207ENST00000490516 NEU3Q9UQ49 428 aa13.59□□□□□ -0.23
EXOSC3-207ENST00000490516 COPG1Q9Y678 874 aaKnown RBP13.59□□□□□ -0.23
EXOSC3-207ENST00000490516 FAM170AA1A519 330 aa13.58□□□□□ -0.24
EXOSC3-207ENST00000490516 TRIM49BA6NDI0 452 aa13.58□□□□□ -0.24
EXOSC3-207ENST00000490516 RASA4BC9J798 803 aa13.58□□□□□ -0.24
EXOSC3-207ENST00000490516 RASA4O43374 803 aa13.58□□□□□ -0.24
EXOSC3-207ENST00000490516 MT-ND3P03897 115 aa13.58□□□□□ -0.24
EXOSC3-207ENST00000490516 FGF5P12034 268 aa13.58□□□□□ -0.24
EXOSC3-207ENST00000490516 PTGER4P35408 488 aa13.58□□□□□ -0.24
EXOSC3-207ENST00000490516 CLCN1P35523 988 aa13.58□□□□□ -0.24
EXOSC3-207ENST00000490516 FLT3P36888 993 aa13.58□□□□□ -0.24
EXOSC3-207ENST00000490516 PRCPP42785 496 aa13.58□□□□□ -0.24
EXOSC3-207ENST00000490516 CRB2Q5IJ48 1285 aa13.58□□□□□ -0.24
EXOSC3-207ENST00000490516 PLXDC1Q8IUK5 500 aa13.58□□□□□ -0.24
EXOSC3-207ENST00000490516 ST6GALNAC3Q8NDV1 305 aa13.58□□□□□ -0.24
EXOSC3-207ENST00000490516 FNIP1Q8TF40 1166 aa13.58□□□□□ -0.24
EXOSC3-207ENST00000490516 UBE2Q2Q8WVN8 375 aa13.58□□□□□ -0.24
EXOSC3-207ENST00000490516 INPP5DQ92835 1189 aa13.58□□□□□ -0.24
EXOSC3-207ENST00000490516 CFAP57Q96MR6 1250 aa13.58□□□□□ -0.24
EXOSC3-207ENST00000490516 SMAD5Q99717 465 aaKnown RBP13.58□□□□□ -0.24
EXOSC3-207ENST00000490516 BARD1Q99728 777 aaKnown RBP13.58□□□□□ -0.24
EXOSC3-207ENST00000490516 GPR87Q9BY21 358 aa13.58□□□□□ -0.24
EXOSC3-207ENST00000490516 SARS2Q9NP81 518 aaKnown RBP13.58□□□□□ -0.24
EXOSC3-207ENST00000490516 UBE2TQ9NPD8 197 aaPredicted RBP13.58□□□□□ -0.24
EXOSC3-207ENST00000490516 GPR83Q9NYM4 423 aa13.58□□□□□ -0.24
EXOSC3-207ENST00000490516 G3BP2Q9UN86 482 aaKnown RBP13.58□□□□□ -0.24
EXOSC3-207ENST00000490516 B3GNT3Q9Y2A9 372 aa13.58□□□□□ -0.24
EXOSC3-207ENST00000490516 TMEM98Q9Y2Y6 226 aa13.58□□□□□ -0.24
EXOSC3-207ENST00000490516 MYO7BQ6PIF6 2116 aa13.58□□□□□ -0.24
EXOSC3-207ENST00000490516 SSU72P8A0A1W2PR75 194 aa13.57□□□□□ -0.24
EXOSC3-207ENST00000490516 GOLGA6CA6NDK9 693 aa13.57□□□□□ -0.24
EXOSC3-207ENST00000490516 GOLGA6BA6NDN3 693 aa13.57□□□□□ -0.24
EXOSC3-207ENST00000490516 BECN2A8MW95 431 aa13.57□□□□□ -0.24
EXOSC3-207ENST00000490516 TMEM63AO94886 807 aa13.57□□□□□ -0.24
EXOSC3-207ENST00000490516 C9P02748 559 aa13.57□□□□□ -0.24
EXOSC3-207ENST00000490516 GOLGA6DP0CG33 693 aa13.57□□□□□ -0.24
EXOSC3-207ENST00000490516 USP8P40818 1118 aa13.57□□□□□ -0.24
EXOSC3-207ENST00000490516 RGRP47804 291 aa13.57□□□□□ -0.24
EXOSC3-207ENST00000490516 EPHA4P54764 986 aa13.57□□□□□ -0.24
EXOSC3-207ENST00000490516 RPS15P62841 145 aaKnown RBP13.57□□□□□ -0.24
EXOSC3-207ENST00000490516 CETN1Q12798 172 aa13.57□□□□□ -0.24
EXOSC3-207ENST00000490516 GRM3Q14832 879 aa13.57□□□□□ -0.24
EXOSC3-207ENST00000490516 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.57□□□□□ -0.24
EXOSC3-207ENST00000490516 PYCR3Q53H96 274 aa13.57□□□□□ -0.24
EXOSC3-207ENST00000490516 DENND2CQ68D51 928 aa13.57□□□□□ -0.24
EXOSC3-207ENST00000490516 MARK2Q7KZI7 788 aaKnown RBP13.57□□□□□ -0.24
EXOSC3-207ENST00000490516 BNIPLQ7Z465 357 aa13.57□□□□□ -0.24
EXOSC3-207ENST00000490516 PPP1R3BQ86XI6 285 aa13.57□□□□□ -0.24
EXOSC3-207ENST00000490516 SCARF2Q96GP6 870 aaPredicted RBP13.57□□□□□ -0.24
EXOSC3-207ENST00000490516 TGM7Q96PF1 710 aa13.57□□□□□ -0.24
EXOSC3-207ENST00000490516 TSG101Q99816 390 aa13.57□□□□□ -0.24
EXOSC3-207ENST00000490516 PLCB1Q9NQ66 1216 aa13.57□□□□□ -0.24
EXOSC3-207ENST00000490516 GOLGA6AQ9NYA3 693 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms