RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 IVLP07476 585 aa17.38■□□□□ 0.37
SEC13-218ENST00000490283 MMP2P08253 660 aa17.38■□□□□ 0.37
SEC13-218ENST00000490283 GABREP78334 506 aa17.38■□□□□ 0.37
SEC13-218ENST00000490283 GALNT3Q14435 633 aa17.38■□□□□ 0.37
SEC13-218ENST00000490283 SLC14A2Q15849 920 aa17.38■□□□□ 0.37
SEC13-218ENST00000490283 PCSK7Q16549 785 aa17.38■□□□□ 0.37
SEC13-218ENST00000490283 TAZQ16635 292 aa17.38■□□□□ 0.37
SEC13-218ENST00000490283 TEX44Q53QW1 395 aa17.38■□□□□ 0.37
SEC13-218ENST00000490283 GPR156Q8NFN8 814 aa17.38■□□□□ 0.37
SEC13-218ENST00000490283 EXD1Q8NHP7 514 aa17.38■□□□□ 0.37
SEC13-218ENST00000490283 SCAMP4Q969E2 229 aa17.38■□□□□ 0.37
SEC13-218ENST00000490283 HIC2Q96JB3 615 aa17.38■□□□□ 0.37
SEC13-218ENST00000490283 SMIM14Q96QK8 99 aa17.38■□□□□ 0.37
SEC13-218ENST00000490283 GFM1Q96RP9 751 aaKnown RBP17.38■□□□□ 0.37
SEC13-218ENST00000490283 FERMT1Q9BQL6 677 aa17.38■□□□□ 0.37
SEC13-218ENST00000490283 RIOK2Q9BVS4 552 aaKnown RBP17.38■□□□□ 0.37
SEC13-218ENST00000490283 SUFUQ9UMX1 484 aa17.38■□□□□ 0.37
SEC13-218ENST00000490283 TFR2Q9UP52 801 aa17.38■□□□□ 0.37
SEC13-218ENST00000490283 SLC17A4Q9Y2C5 497 aa17.38■□□□□ 0.37
SEC13-218ENST00000490283 GPSM3Q9Y4H4 160 aa17.38■□□□□ 0.37
SEC13-218ENST00000490283 ASPMQ8IZT6 3477 aa17.37■□□□□ 0.37
SEC13-218ENST00000490283 hCG_1818297A0A087WSY0 165 aa17.37■□□□□ 0.37
SEC13-218ENST00000490283 RGSL1A5PLK6 1076 aa17.37■□□□□ 0.37
SEC13-218ENST00000490283 GOLGA6L6A8MZA4 724 aa17.37■□□□□ 0.37
SEC13-218ENST00000490283 ZW10O43264 779 aa17.37■□□□□ 0.37
SEC13-218ENST00000490283 ASMTLO95671 621 aa17.37■□□□□ 0.37
SEC13-218ENST00000490283 MPOP05164 745 aa17.37■□□□□ 0.37
SEC13-218ENST00000490283 GLB1P16278 677 aa17.37■□□□□ 0.37
SEC13-218ENST00000490283 CETN2P41208 172 aa17.37■□□□□ 0.37
SEC13-218ENST00000490283 CDK18Q07002 472 aa17.37■□□□□ 0.37
SEC13-218ENST00000490283 IHHQ14623 411 aa17.37■□□□□ 0.37
SEC13-218ENST00000490283 PRKD1Q15139 912 aaPredicted RBP17.37■□□□□ 0.37
SEC13-218ENST00000490283 LLGL1Q15334 1064 aa17.37■□□□□ 0.37
SEC13-218ENST00000490283 C14orf28Q4W4Y0 310 aa17.37■□□□□ 0.37
SEC13-218ENST00000490283 C19orf48Q6RUI8 117 aa17.37■□□□□ 0.37
SEC13-218ENST00000490283 KDELC2Q7Z4H8 507 aa17.37■□□□□ 0.37
SEC13-218ENST00000490283 KIAA1328Q86T90 577 aa17.37■□□□□ 0.37
SEC13-218ENST00000490283 GPBAR1Q8TDU6 330 aa17.37■□□□□ 0.37
SEC13-218ENST00000490283 HNRNPLLQ8WVV9 542 aaKnown RBP17.37■□□□□ 0.37
SEC13-218ENST00000490283 FGF11Q92914 225 aa17.37■□□□□ 0.37
SEC13-218ENST00000490283 OR2M4Q96R27 311 aa17.37■□□□□ 0.37
SEC13-218ENST00000490283 SRPK1Q96SB4 655 aaKnown RBP17.37■□□□□ 0.37
SEC13-218ENST00000490283 FAM83DQ9H4H8 585 aa17.37■□□□□ 0.37
SEC13-218ENST00000490283 POLR1BQ9H9Y6 1135 aa17.37■□□□□ 0.37
SEC13-218ENST00000490283 GLOD4Q9HC38 313 aa17.37■□□□□ 0.37
SEC13-218ENST00000490283 RAD18Q9NS91 495 aa17.37■□□□□ 0.37
SEC13-218ENST00000490283 KLHL8Q9P2G9 620 aaPredicted RBP17.37■□□□□ 0.37
SEC13-218ENST00000490283 SAE1Q9UBE0 346 aaPredicted RBP17.37■□□□□ 0.37
SEC13-218ENST00000490283 ACACAQ13085 2346 aa17.36■□□□□ 0.37
SEC13-218ENST00000490283 A0A087WV48 116 aa17.36■□□□□ 0.37
SEC13-218ENST00000490283 TMX2-CTNND1H3BSU7 103 aa17.36■□□□□ 0.37
SEC13-218ENST00000490283 INPP4BO15327 924 aa17.36■□□□□ 0.37
SEC13-218ENST00000490283 RPLP0P05388 317 aaKnown RBP17.36■□□□□ 0.37
SEC13-218ENST00000490283 PNLIPP16233 465 aa17.36■□□□□ 0.37
SEC13-218ENST00000490283 PECAM1P16284 738 aaPredicted RBP17.36■□□□□ 0.37
SEC13-218ENST00000490283 FECHP22830 423 aa17.36■□□□□ 0.37
SEC13-218ENST00000490283 PTPN3P26045 913 aa17.36■□□□□ 0.37
SEC13-218ENST00000490283 ABCG1P45844 678 aa17.36■□□□□ 0.37
SEC13-218ENST00000490283 LSSP48449 732 aa17.36■□□□□ 0.37
SEC13-218ENST00000490283 SPINT3P49223 89 aa17.36■□□□□ 0.37
SEC13-218ENST00000490283 PPP2R5EQ16537 467 aa17.36■□□□□ 0.37
SEC13-218ENST00000490283 TBC1D25Q3MII6 688 aa17.36■□□□□ 0.37
SEC13-218ENST00000490283 CERCAMQ5T4B2 595 aa17.36■□□□□ 0.37
SEC13-218ENST00000490283 OGFOD3Q6PK18 319 aa17.36■□□□□ 0.37
SEC13-218ENST00000490283 RFLNAQ6ZTI6 216 aa17.36■□□□□ 0.37
SEC13-218ENST00000490283 B4GALNT4Q76KP1 1039 aa17.36■□□□□ 0.37
SEC13-218ENST00000490283 ZC3H18Q86VM9 953 aaKnown RBP17.36■□□□□ 0.37
SEC13-218ENST00000490283 GALNT13Q8IUC8 556 aa17.36■□□□□ 0.37
SEC13-218ENST00000490283 CCL4L1Q8NHW4 92 aa17.36■□□□□ 0.37
SEC13-218ENST00000490283 ZDHHC1Q8WTX9 485 aa17.36■□□□□ 0.37
SEC13-218ENST00000490283 HAUS1Q96CS2 278 aa17.36■□□□□ 0.37
SEC13-218ENST00000490283 TEKT5Q96M29 485 aa17.36■□□□□ 0.37
SEC13-218ENST00000490283 ZNF578Q96N58 590 aaPredicted RBP17.36■□□□□ 0.37
SEC13-218ENST00000490283 VAT1Q99536 393 aa17.36■□□□□ 0.37
SEC13-218ENST00000490283 BAG1Q99933 345 aaPredicted RBP17.36■□□□□ 0.37
SEC13-218ENST00000490283 STRADBQ9C0K7 418 aa17.36■□□□□ 0.37
SEC13-218ENST00000490283 ZFYVE1Q9HBF4 777 aa17.36■□□□□ 0.37
SEC13-218ENST00000490283 APC2O95996 2303 aa17.36■□□□□ 0.37
SEC13-218ENST00000490283 MACROD2A1Z1Q3 448 aa17.35■□□□□ 0.37
SEC13-218ENST00000490283 CCDC66A2RUB6 948 aa17.35■□□□□ 0.37
SEC13-218ENST00000490283 HACD1B0YJ81 288 aa17.35■□□□□ 0.37
SEC13-218ENST00000490283 NUDT21O43809 227 aaKnown RBP17.35■□□□□ 0.37
SEC13-218ENST00000490283 NOBOXO60393 691 aa17.35■□□□□ 0.37
SEC13-218ENST00000490283 SOD1P00441 154 aa17.35■□□□□ 0.37
SEC13-218ENST00000490283 SLC4A1P02730 911 aa17.35■□□□□ 0.37
SEC13-218ENST00000490283 CTNNA2P26232 953 aa17.35■□□□□ 0.37
SEC13-218ENST00000490283 RBMS1P29558 406 aaKnown RBP17.35■□□□□ 0.37
SEC13-218ENST00000490283 CTNNA1P35221 906 aaKnown RBP17.35■□□□□ 0.37
SEC13-218ENST00000490283 POLD2P49005 469 aa17.35■□□□□ 0.37
SEC13-218ENST00000490283 MARCKSL1P49006 195 aa17.35■□□□□ 0.37
SEC13-218ENST00000490283 COPS2P61201 443 aa17.35■□□□□ 0.37
SEC13-218ENST00000490283 C3orf38Q5JPI3 329 aa17.35■□□□□ 0.37
SEC13-218ENST00000490283 SLC30A9Q6PML9 568 aa17.35■□□□□ 0.37
SEC13-218ENST00000490283 MARK2Q7KZI7 788 aaKnown RBP17.35■□□□□ 0.37
SEC13-218ENST00000490283 LYSMD3Q7Z3D4 306 aa17.35■□□□□ 0.37
SEC13-218ENST00000490283 TRIM74Q86UV6 250 aa17.35■□□□□ 0.37
SEC13-218ENST00000490283 CCNJLQ8IV13 435 aa17.35■□□□□ 0.37
SEC13-218ENST00000490283 Q8N9G6 341 aaPredicted RBP17.35■□□□□ 0.37
SEC13-218ENST00000490283 SNIP1Q8TAD8 396 aaKnown RBP17.35■□□□□ 0.37
SEC13-218ENST00000490283 ATXN7L3BQ96GX2 97 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms