RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 GAGE1Q13065 139 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 GAGE4Q13068 117 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 ACVR2BQ13705 512 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 WTAPQ15007 396 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 HLFQ16534 295 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 RILPL1Q5EBL4 403 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 ACSM2BQ68CK6 577 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 KCTD18Q6PI47 426 aaPredicted RBP3.95□□□□□ -1.78
CD46-216ENST00000490278 SLC36A4Q6YBV0 504 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 BRINP3Q76B58 766 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 SZRD1Q7Z422 152 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 FOXRED2Q8IWF2 684 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 HACE1Q8IYU2 909 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 IQCF1Q8N6M8 205 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 CLEC18CQ8NCF0 446 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 C1orf131Q8NDD1 294 aaKnown RBP3.95□□□□□ -1.78
CD46-216ENST00000490278 RND1Q92730 232 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 TMEM204Q9BSN7 226 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 MAK16Q9BXY0 300 aaKnown RBP3.95□□□□□ -1.78
CD46-216ENST00000490278 SEZ6LQ9BYH1 1024 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 CCDC68Q9H2F9 335 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 ACSS1Q9NUB1 689 aaPredicted RBP3.95□□□□□ -1.78
CD46-216ENST00000490278 ADD3Q9UEY8 706 aaKnown RBP3.95□□□□□ -1.78
CD46-216ENST00000490278 TINAGQ9UJW2 476 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 R3HDM2Q9Y2K5 976 aaKnown RBP3.95□□□□□ -1.78
CD46-216ENST00000490278 CACNA1IQ9P0X4 2223 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 SOCS6O14544 535 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 INSIG1O15503 277 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 PLRG1O43660 514 aaKnown RBP3.94□□□□□ -1.78
CD46-216ENST00000490278 HS6ST1O60243 411 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 RB1P06400 928 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 LDHCP07864 332 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 SRPRAP08240 638 aaKnown RBP3.94□□□□□ -1.78
CD46-216ENST00000490278 ACAA1P09110 424 aaPredicted RBP3.94□□□□□ -1.78
CD46-216ENST00000490278 CSH1P0DML2 217 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 CSH2P0DML3 217 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 IGHV4-30-4P0DP06 118 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 SNHG28P0DPA3 235 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 UBA1P22314 1058 aaKnown RBP3.94□□□□□ -1.78
CD46-216ENST00000490278 RRM1P23921 792 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 ITGB8P26012 769 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 SSTR2P30874 369 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 CAMPP49913 170 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 HTR6P50406 440 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 TAS2R40P59535 323 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 MRPS34P82930 218 aaKnown RBP3.94□□□□□ -1.78
CD46-216ENST00000490278 ECT2LQ008S8 904 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 DDR1Q08345 913 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 LRMPQ12912 555 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 CHAF1BQ13112 559 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 TRAF3Q13114 568 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 DHX34Q14147 1143 aaKnown RBP3.94□□□□□ -1.78
CD46-216ENST00000490278 ASTE1Q2TB18 679 aaPredicted RBP3.94□□□□□ -1.78
CD46-216ENST00000490278 PCGF3Q3KNV8 242 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 XKR9Q5GH70 373 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 PLEKHS1Q5SXH7 462 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 LRIF1Q5T3J3 769 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 PMS2CLQ68D20 193 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 KIAA0930Q6ICG6 404 aaPredicted RBP3.94□□□□□ -1.78
CD46-216ENST00000490278 SRBD1Q8N5C6 995 aaKnown RBP3.94□□□□□ -1.78
CD46-216ENST00000490278 ELP5Q8TE02 316 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 WFIKKN2Q8TEU8 576 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 MTBPQ96DY7 904 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 ELMOD3Q96FG2 381 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 RSRC1Q96IZ7 334 aaKnown RBP3.94□□□□□ -1.78
CD46-216ENST00000490278 OR2A14Q96R47 310 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 TMX4Q9H1E5 349 aaPredicted RBP3.94□□□□□ -1.78
CD46-216ENST00000490278 NOX4Q9NPH5 578 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 SETD4Q9NVD3 440 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 OGFRQ9NZT2 677 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 FBXL17Q9UF56 701 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 SNX9Q9Y5X1 595 aa3.94□□□□□ -1.78
CD46-216ENST00000490278 hCG_1807616A0A1W2PRN6 198 aa3.93□□□□□ -1.78
CD46-216ENST00000490278 CDRT15L2A8MXV6 281 aa3.93□□□□□ -1.78
CD46-216ENST00000490278 ATP2A1O14983 1001 aa3.93□□□□□ -1.78
CD46-216ENST00000490278 EGFP01133 1207 aa3.93□□□□□ -1.78
CD46-216ENST00000490278 ACTN1P12814 892 aa3.93□□□□□ -1.78
CD46-216ENST00000490278 SRCP12931 536 aa3.93□□□□□ -1.78
CD46-216ENST00000490278 BDKRB2P30411 391 aa3.93□□□□□ -1.78
CD46-216ENST00000490278 HOXA13P31271 388 aaPredicted RBP3.93□□□□□ -1.78
CD46-216ENST00000490278 HNRNPH2P55795 449 aaKnown RBP3.93□□□□□ -1.78
CD46-216ENST00000490278 SEC61BP60468 96 aaKnown RBP3.93□□□□□ -1.78
CD46-216ENST00000490278 CSNK2A1P68400 391 aaPredicted RBP3.93□□□□□ -1.78
CD46-216ENST00000490278 FOXM1Q08050 763 aa3.93□□□□□ -1.78
CD46-216ENST00000490278 IKQ13123 557 aaPredicted RBP3.93□□□□□ -1.78
CD46-216ENST00000490278 IRF3Q14653 427 aa3.93□□□□□ -1.78
CD46-216ENST00000490278 CTF1Q16619 201 aa3.93□□□□□ -1.78
CD46-216ENST00000490278 PNLIPRP3Q17RR3 467 aa3.93□□□□□ -1.78
CD46-216ENST00000490278 ATP13A5Q4VNC0 1218 aa3.93□□□□□ -1.78
CD46-216ENST00000490278 PAPPA-AS1Q5QFB9 102 aa3.93□□□□□ -1.78
CD46-216ENST00000490278 FRG2Q64ET8 278 aa3.93□□□□□ -1.78
CD46-216ENST00000490278 DUS1LQ6P1R4 473 aaKnown RBP3.93□□□□□ -1.78
CD46-216ENST00000490278 WDR73Q6P4I2 378 aa3.93□□□□□ -1.78
CD46-216ENST00000490278 CFAP77Q6ZQR2 320 aa3.93□□□□□ -1.78
CD46-216ENST00000490278 PGBD5Q8N414 524 aa3.93□□□□□ -1.78
CD46-216ENST00000490278 HJURPQ8NCD3 748 aaPredicted RBP3.93□□□□□ -1.78
CD46-216ENST00000490278 CSNK2A3Q8NEV1 391 aa3.93□□□□□ -1.78
CD46-216ENST00000490278 OR8K5Q8NH50 307 aa3.93□□□□□ -1.78
CD46-216ENST00000490278 TMED6Q8WW62 240 aa3.93□□□□□ -1.78
CD46-216ENST00000490278 NEUROG1Q92886 237 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms