RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 TRPM5Q9NZQ8 1165 aa9.56□□□□□ -0.88
RAB3GAP1-205ENST00000489858 STK39Q9UEW8 545 aa9.56□□□□□ -0.88
RAB3GAP1-205ENST00000489858 AFF4Q9UHB7 1163 aaKnown RBP9.56□□□□□ -0.88
RAB3GAP1-205ENST00000489858 VPS28Q9UK41 221 aa9.56□□□□□ -0.88
RAB3GAP1-205ENST00000489858 KCTD3Q9Y597 815 aa9.56□□□□□ -0.88
RAB3GAP1-205ENST00000489858 COPG1Q9Y678 874 aaKnown RBP9.56□□□□□ -0.88
RAB3GAP1-205ENST00000489858 ZFP37Q9Y6Q3 630 aaPredicted RBP9.56□□□□□ -0.88
RAB3GAP1-205ENST00000489858 CHD5Q8TDI0 1954 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 TTC3P53804 2025 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 A0A1B0GVM2 712 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 CDC14CA4D256 554 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 TCAF2A6NFQ2 919 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 NT5C1B-RDH14C9J2C7 533 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 H3BNC9 293 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 PFDN6O15212 129 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 INSIG1O15503 277 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 SMNDC1O75940 238 aaKnown RBP eCLIP9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 ARHGEF15O94989 841 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 PARNO95453 639 aaKnown RBP9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 JUNP05412 331 aaKnown RBP9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 HNRNPLP14866 589 aaKnown RBP eCLIP9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 IMPDH1P20839 514 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 KCNA5P22460 613 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 SP100P23497 879 aaPredicted RBP9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 PMLP29590 882 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 CORO1AP31146 461 aaKnown RBP9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 ATP4BP51164 291 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 ZNF140P52738 457 aaPredicted RBP9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 STC1P52823 247 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 ZNF177Q13360 481 aaPredicted RBP9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 ART3Q13508 389 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 GPNMBQ14956 572 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 VEPH1Q14D04 833 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 TAF12Q16514 161 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 TCHHL1Q5QJ38 904 aaPredicted RBP9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 PPM1LQ5SGD2 360 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 GPR158Q5T848 1215 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 ZNF783Q6ZMS7 281 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 LDB1Q86U70 411 aaPredicted RBP9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 PIM3Q86V86 326 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 HPS6Q86YV9 775 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 PELI3Q8N2H9 469 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 ANKRD49Q8WVL7 239 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 EXT2Q93063 718 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 MOCOSQ96EN8 888 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 MARK4Q96L34 752 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 PRICKLE1Q96MT3 831 aaPredicted RBP9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 TCF12Q99081 682 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 ECSITQ9BQ95 431 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 CCDC68Q9H2F9 335 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 GSTO2Q9H4Y5 243 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 CWH43Q9H720 699 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 MEAF6Q9HAF1 191 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 MRPL40Q9NQ50 206 aaKnown RBP9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 HACD3Q9P035 362 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 HSFX1Q9UBD0 423 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 AGO1Q9UL18 857 aaKnown RBP9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 TMCO1Q9UM00 188 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 FIS1Q9Y3D6 152 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 ARL5AQ9Y689 179 aa9.55□□□□□ -0.88
RAB3GAP1-205ENST00000489858 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 UBA6A0AVT1 1052 aaPredicted RBP9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 ZNF840PA6NDX5 716 aa9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 C2orf81A6NN90 581 aa9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 UBDO15205 165 aa9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 ADAM12O43184 909 aa9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 COCHO43405 550 aa9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 BUD23O43709 281 aaKnown RBP9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 GPC4O75487 556 aa9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 GJB3O75712 270 aa9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 TRPA1O75762 1119 aa9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 RHOBTB1O94844 696 aa9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 GJB5O95377 273 aa9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 LATS1O95835 1130 aa9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 ADH1AP07327 375 aa9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 PDHA1P08559 390 aa9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 HSPA1AP0DMV8 641 aaKnown RBP9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 HSPA1BP0DMV9 641 aaKnown RBP9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 IRF1P10914 325 aa9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 ENO3P13929 434 aaPredicted RBP9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 CD1DP15813 335 aa9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 RAG1P15918 1043 aa9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 CDC25CP30307 473 aa9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 OR1D2P34982 312 aa9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 PLK1P53350 603 aa9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 RPL26P61254 145 aaKnown RBP9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 STX1BP61266 288 aa9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 ATP6V0D1P61421 351 aa9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 NAA20P61599 178 aa9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 HERVK_113P63132 956 aa9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 STX5Q13190 355 aa9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 PLD1Q13393 1074 aa9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 TAF1AQ15573 450 aaPredicted RBP9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 TCTN1Q2MV58 587 aa9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 DEFB115Q30KQ5 88 aa9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 ZNF678Q5SXM1 525 aa9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 TMEM198Q66K66 360 aa9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 TPGS2Q68CL5 300 aa9.54□□□□□ -0.88
RAB3GAP1-205ENST00000489858 KIAA1841Q6NSI8 718 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms