RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 GBA3Q9H227 469 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 GLOD4Q9HC38 313 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 EVA1BQ9NVM1 165 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 RBM22Q9NW64 420 aaKnown RBP eCLIP10.58□□□□□ -0.723e-6■■■■■ 29.5
SCAMP4-208ENST00000489554 UCKL1Q9NWZ5 548 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 NLGN3Q9NZ94 848 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 TRHDEQ9UKU6 1024 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 ZMIZ1Q9ULJ6 1067 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 TRPM6Q9BX84 2022 aa10.58□□□□□ -0.72
SCAMP4-208ENST00000489554 TCRBV7S3A2A0A539 114 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 ESYT3A0FGR9 886 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 TRAFD1O14545 582 aaPredicted RBP10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 SCAMP1O15126 338 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 FFAR2O15552 330 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 SOCS5O75159 536 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 ZNF189O75820 626 aaPredicted RBP10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 GAS8O95995 478 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 RHOXF2BP0C7M4 288 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 C6P13671 934 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 ACP1P24666 158 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 NFKBIAP25963 317 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 PSMB4P28070 264 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 HNF1BP35680 557 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 VPS41P49754 854 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 MAXP61244 160 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 DAB2P98082 770 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 DSC2Q02487 901 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 SEMA5AQ13591 1074 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 KCNJ11Q14654 390 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 ZNF542PQ5EBM4 170 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 FAXCQ5TGI0 409 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 MARC1Q5VT66 337 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 ANKRD22Q5VYY1 191 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 KCTD11Q693B1 232 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 ZDHHC24Q6UX98 284 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 MACC1Q6ZN28 852 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 GSTA5Q7RTV2 222 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 HDXQ7Z353 690 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 ZSWIM9Q86XI8 627 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 TAB3Q8N5C8 712 aaPredicted RBP10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 CCDC89Q8N998 374 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 ZNF548Q8NEK5 533 aaPredicted RBP10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 CPT1BQ92523 772 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 TBATAQ96M53 351 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 FCRL5Q96RD9 977 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 NUDCD1Q96RS6 583 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 RHOXF2Q9BQY4 288 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 ETNK1Q9HBU6 452 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 NT5MQ9NPB1 228 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 MBNL1Q9NR56 388 aaKnown RBP10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 HAUS2Q9NVX0 235 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 PAK5Q9P286 719 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 KLHL8Q9P2G9 620 aaPredicted RBP10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 FEZ2Q9UHY8 353 aaPredicted RBP10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 CSNK1G3Q9Y6M4 447 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 CACNA1BQ00975 2339 aa10.57□□□□□ -0.72
SCAMP4-208ENST00000489554 ANKRD36A6QL64 1941 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 F5H423 210 aaPredicted RBP10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 DNALI1O14645 258 aaPredicted RBP10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 AQP9O43315 295 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 HTRA2O43464 458 aaPredicted RBP10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 LZTS3O60299 673 aaPredicted RBP10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 TMEM63AO94886 807 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 SEC31AO94979 1220 aaKnown RBP10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 GIMD1P0DJR0 217 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 MYBL2P10244 700 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 JUNDP17535 347 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 HTR1BP28222 390 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 LIG3P49916 1009 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 BLKP51451 505 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 DRG2P55039 364 aaKnown RBP10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 SKOR1P84550 965 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 E2F1Q01094 437 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 GPS1Q13098 491 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 EIF2B5Q13144 721 aaKnown RBP10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 OLIG2Q13516 323 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 IRF4Q15306 451 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 PPP1R7Q15435 360 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 PARP6Q2NL67 630 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 WSCD2Q2TBF2 565 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 TPRG1LQ5T0D9 272 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 RNASEH2BQ5TBB1 312 aaKnown RBP10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 KDELC1Q6UW63 502 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 ZNF534Q76KX8 674 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 DPPA4Q7L190 304 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 PID1Q7Z2X4 250 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 IFT20Q8IY31 132 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 NAT8LQ8N9F0 302 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 EIF1ADQ8N9N8 165 aaKnown RBP10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 FAM181AQ8N9Y4 354 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 SPATA22Q8NHS9 363 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 IMP4Q96G21 291 aaKnown RBP10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 SLC25A51Q9H1U9 297 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 DPH5Q9H2P9 285 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 CCDC86Q9H6F5 360 aaKnown RBP10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 SCUBE2Q9NQ36 999 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 ZDHHC18Q9NUE0 388 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 NCKIPSDQ9NZQ3 722 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 SPASTQ9UBP0 616 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 COQ6Q9Y2Z9 468 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms