RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 CXorf51AA0A1B0GTR3 108 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 TSPAN11A1L157 253 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 ZSCAN5CA6NGD5 496 aaPredicted RBP9.14□□□□□ -0.95
SSBP1-212ENST00000489378 PRSS44E7EML9 344 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 BUB1BO60566 1050 aaPredicted RBP9.14□□□□□ -0.95
SSBP1-212ENST00000489378 DPM1O60762 260 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 KIAA0754O94854 1291 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 RECKO95980 971 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 ERBB2P04626 1255 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 KRT5P13647 590 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 HOXB4P17483 251 aaPredicted RBP9.14□□□□□ -0.95
SSBP1-212ENST00000489378 FMO5P49326 533 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 SUOXP51687 545 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 ITGA1P56199 1179 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 GEMIN4P57678 1058 aaKnown RBP9.14□□□□□ -0.95
SSBP1-212ENST00000489378 RPS18P62269 152 aaKnown RBP9.14□□□□□ -0.95
SSBP1-212ENST00000489378 FOXM1Q08050 763 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 RALGDSQ12967 914 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 CUL4AQ13619 759 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 ZRSR2Q15696 482 aaKnown RBP9.14□□□□□ -0.95
SSBP1-212ENST00000489378 CHRNA6Q15825 494 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 MEA1Q16626 185 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 ERAP2Q6P179 960 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 C11orf57Q6ZUT1 292 aaPredicted RBP9.14□□□□□ -0.95
SSBP1-212ENST00000489378 LMO3Q8TAP4 145 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 ZNF606Q8WXB4 792 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 NCSTNQ92542 709 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 ELMO2Q96JJ3 720 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 SLC38A3Q99624 504 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 ING2Q9H160 280 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 ACSS2Q9NR19 701 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 TRNAU1APQ9NX07 287 aaKnown RBP9.14□□□□□ -0.95
SSBP1-212ENST00000489378 DNAI1Q9UI46 699 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 SUFUQ9UMX1 484 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 CNTN6Q9UQ52 1028 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 ATP8A1Q9Y2Q0 1164 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 MFHAS1Q9Y4C4 1052 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 ZGRF1Q86YA3 2104 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 LRRTM2O43300 516 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 THAP12O43422 761 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 BUB1O43683 1085 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 ZG16O60844 167 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 CEACAM4O75871 244 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 IGSF6O95976 241 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 MYCLP1P12525 358 aaPredicted RBP9.14□□□□□ -0.95
SSBP1-212ENST00000489378 HNRNPH3P31942 346 aaKnown RBP9.14□□□□□ -0.95
SSBP1-212ENST00000489378 ADCY8P40145 1251 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 ACTR1BP42025 376 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 POLD2P49005 469 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 SULT1E1P49888 294 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 ACTR1AP61163 376 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 RHOAP61586 193 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 DEUP1Q05D60 604 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 RAD51Q06609 339 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 CDK18Q07002 472 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 ELOAQ14241 798 aaKnown RBP9.14□□□□□ -0.95
SSBP1-212ENST00000489378 UGT8Q16880 541 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 PLEKHN1Q494U1 663 aaPredicted RBP9.14□□□□□ -0.95
SSBP1-212ENST00000489378 PNCKQ6P2M8 343 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 SLC26A9Q7LBE3 791 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 SMYD4Q8IYR2 804 aaPredicted RBP9.14□□□□□ -0.95
SSBP1-212ENST00000489378 SLC37A2Q8TED4 501 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 INTS4Q96HW7 963 aaKnown RBP9.14□□□□□ -0.95
SSBP1-212ENST00000489378 EXOC2Q96KP1 924 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 ZNF396Q96N95 335 aaPredicted RBP9.14□□□□□ -0.95
SSBP1-212ENST00000489378 TBCBQ99426 244 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 NUDT9Q9BW91 350 aa9.14□□□□□ -0.95
SSBP1-212ENST00000489378 FRMD8Q9BZ67 464 aaPredicted RBP9.14□□□□□ -0.95
SSBP1-212ENST00000489378 PDE2AO00408 941 aaPredicted RBP9.13□□□□□ -0.95
SSBP1-212ENST00000489378 SLC16A3O15427 465 aaKnown RBP9.13□□□□□ -0.95
SSBP1-212ENST00000489378 MED7O43513 233 aa9.13□□□□□ -0.95
SSBP1-212ENST00000489378 KDELR3O43731 214 aa9.13□□□□□ -0.95
SSBP1-212ENST00000489378 NDUFA10O95299 355 aa9.13□□□□□ -0.95
SSBP1-212ENST00000489378 EML2O95834 649 aa9.13□□□□□ -0.95
SSBP1-212ENST00000489378 ETFBP38117 255 aa9.13□□□□□ -0.95
SSBP1-212ENST00000489378 GARSP41250 739 aaKnown RBP9.13□□□□□ -0.95
SSBP1-212ENST00000489378 PTGIRP43119 386 aa9.13□□□□□ -0.95
SSBP1-212ENST00000489378 MAPK9P45984 424 aa9.13□□□□□ -0.95
SSBP1-212ENST00000489378 FASLGP48023 281 aa9.13□□□□□ -0.95
SSBP1-212ENST00000489378 ME1P48163 572 aa9.13□□□□□ -0.95
SSBP1-212ENST00000489378 RNASE9P60153 205 aaKnown RBP9.13□□□□□ -0.95
SSBP1-212ENST00000489378 SLC6A3Q01959 620 aa9.13□□□□□ -0.95
SSBP1-212ENST00000489378 GCNT1Q02742 428 aa9.13□□□□□ -0.95
SSBP1-212ENST00000489378 NFATC2Q13469 925 aa9.13□□□□□ -0.95
SSBP1-212ENST00000489378 IL10RAQ13651 578 aa9.13□□□□□ -0.95
SSBP1-212ENST00000489378 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.13□□□□□ -0.95
SSBP1-212ENST00000489378 LIPIQ6XZB0 460 aa9.13□□□□□ -0.95
SSBP1-212ENST00000489378 SPNS3Q6ZMD2 512 aa9.13□□□□□ -0.95
SSBP1-212ENST00000489378 GDF7Q7Z4P5 450 aa9.13□□□□□ -0.95
SSBP1-212ENST00000489378 PASD1Q8IV76 773 aa9.13□□□□□ -0.95
SSBP1-212ENST00000489378 RHOT1Q8IXI2 618 aa9.13□□□□□ -0.95
SSBP1-212ENST00000489378 IQCKQ8N0W5 287 aa9.13□□□□□ -0.95
SSBP1-212ENST00000489378 MMP21Q8N119 569 aa9.13□□□□□ -0.95
SSBP1-212ENST00000489378 FDCSPQ8NFU4 85 aa9.13□□□□□ -0.95
SSBP1-212ENST00000489378 THAP4Q8WY91 577 aa9.13□□□□□ -0.95
SSBP1-212ENST00000489378 NT5C3BQ969T7 300 aa9.13□□□□□ -0.95
SSBP1-212ENST00000489378 NCAPGQ9BPX3 1015 aa9.13□□□□□ -0.95
SSBP1-212ENST00000489378 GTPBP4Q9BZE4 634 aaKnown RBP9.13□□□□□ -0.95
SSBP1-212ENST00000489378 KLC2Q9H0B6 622 aa9.13□□□□□ -0.95
SSBP1-212ENST00000489378 SUV39H2Q9H5I1 410 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms