RNA–Protein interactions for RNA: ENST00000489160.1

CCL20-204, Transcript of C-C motif chemokine ligand 20, humanhuman

TSL 3

Gene CCL20, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-204ENST00000489160 HIST2H2BDQ6DRA6 164 aa5.05□□□□□ -1.6
CCL20-204ENST00000489160 JADE1Q6IE81 842 aa5.05□□□□□ -1.6
CCL20-204ENST00000489160 NAA16Q6N069 864 aaPredicted RBP5.05□□□□□ -1.6
CCL20-204ENST00000489160 ANKRD54Q6NXT1 300 aa5.05□□□□□ -1.6
CCL20-204ENST00000489160 METTL2BQ6P1Q9 378 aaKnown RBP5.05□□□□□ -1.6
CCL20-204ENST00000489160 DLK2Q6UY11 383 aa5.05□□□□□ -1.6
CCL20-204ENST00000489160 SZRD1Q7Z422 152 aa5.05□□□□□ -1.6
CCL20-204ENST00000489160 TECPR1Q7Z6L1 1165 aa5.05□□□□□ -1.6
CCL20-204ENST00000489160 GALNT13Q8IUC8 556 aa5.05□□□□□ -1.6
CCL20-204ENST00000489160 CCDC13Q8IYE1 715 aa5.05□□□□□ -1.6
CCL20-204ENST00000489160 METTL2AQ96IZ6 378 aaKnown RBP5.05□□□□□ -1.6
CCL20-204ENST00000489160 ZNF48Q96MX3 618 aaPredicted RBP5.05□□□□□ -1.6
CCL20-204ENST00000489160 LRFN5Q96NI6 719 aa5.05□□□□□ -1.6
CCL20-204ENST00000489160 ADPGKQ9BRR6 497 aa5.05□□□□□ -1.6
CCL20-204ENST00000489160 MAK16Q9BXY0 300 aaKnown RBP5.05□□□□□ -1.6
CCL20-204ENST00000489160 RETREG1Q9H6L5 497 aa5.05□□□□□ -1.6
CCL20-204ENST00000489160 ESRP2Q9H6T0 727 aaKnown RBP5.05□□□□□ -1.6
CCL20-204ENST00000489160 GPR108Q9NPR9 543 aa5.05□□□□□ -1.6
CCL20-204ENST00000489160 HINT3Q9NQE9 182 aaKnown RBP5.05□□□□□ -1.6
CCL20-204ENST00000489160 INSL5Q9Y5Q6 135 aa5.05□□□□□ -1.6
CCL20-204ENST00000489160 A0A1B0GVT2 93 aa5.04□□□□□ -1.6
CCL20-204ENST00000489160 INAFM1C9JVW0 142 aa5.04□□□□□ -1.6
CCL20-204ENST00000489160 BEST1O76090 585 aa5.04□□□□□ -1.6
CCL20-204ENST00000489160 CRYABP02511 175 aaKnown RBP5.04□□□□□ -1.6
CCL20-204ENST00000489160 TMEM11P17152 192 aa5.04□□□□□ -1.6
CCL20-204ENST00000489160 MAOAP21397 527 aa5.04□□□□□ -1.6
CCL20-204ENST00000489160 METAP2P50579 478 aaKnown RBP eCLIP5.04□□□□□ -1.6
CCL20-204ENST00000489160 NAB2Q15742 525 aa5.04□□□□□ -1.6
CCL20-204ENST00000489160 ZSCAN23Q3MJ62 389 aa5.04□□□□□ -1.6
CCL20-204ENST00000489160 PPP6R3Q5H9R7 873 aaPredicted RBP5.04□□□□□ -1.6
CCL20-204ENST00000489160 PLEKHS1Q5SXH7 462 aa5.04□□□□□ -1.6
CCL20-204ENST00000489160 DAB2IPQ5VWQ8 1189 aa5.04□□□□□ -1.6
CCL20-204ENST00000489160 PQLC2Q6ZP29 291 aa5.04□□□□□ -1.6
CCL20-204ENST00000489160 SEPT14Q6ZU15 432 aa5.04□□□□□ -1.6
CCL20-204ENST00000489160 GALNTL5Q7Z4T8 443 aa5.04□□□□□ -1.6
CCL20-204ENST00000489160 IQCA1Q86XH1 822 aa5.04□□□□□ -1.6
CCL20-204ENST00000489160 RNF168Q8IYW5 571 aaPredicted RBP5.04□□□□□ -1.6
CCL20-204ENST00000489160 OR14L1PQ8NHC6 308 aa5.04□□□□□ -1.6
CCL20-204ENST00000489160 RRNAD1Q96FB5 475 aaKnown RBP5.04□□□□□ -1.6
CCL20-204ENST00000489160 CCDC34Q96HJ3 373 aa5.04□□□□□ -1.6
CCL20-204ENST00000489160 FCRL4Q96PJ5 515 aa5.04□□□□□ -1.6
CCL20-204ENST00000489160 SEPT5Q99719 369 aaPredicted RBP5.04□□□□□ -1.6
CCL20-204ENST00000489160 SF3B5Q9BWJ5 86 aaKnown RBP5.04□□□□□ -1.6
CCL20-204ENST00000489160 DCLK3Q9C098 648 aa5.04□□□□□ -1.6
CCL20-204ENST00000489160 NDST4Q9H3R1 872 aa5.04□□□□□ -1.6
CCL20-204ENST00000489160 RNF7Q9UBF6 113 aa5.04□□□□□ -1.6
CCL20-204ENST00000489160 CHORDC1Q9UHD1 332 aaPredicted RBP5.04□□□□□ -1.6
CCL20-204ENST00000489160 RCOR1Q9UKL0 485 aa5.04□□□□□ -1.6
CCL20-204ENST00000489160 ZNF711Q9Y462 761 aa5.04□□□□□ -1.6
CCL20-204ENST00000489160 SNX5Q9Y5X3 404 aa5.04□□□□□ -1.6
CCL20-204ENST00000489160 PTGDR2Q9Y5Y4 395 aa5.04□□□□□ -1.6
CCL20-204ENST00000489160 SMTNL1A8MU46 457 aa5.03□□□□□ -1.6
CCL20-204ENST00000489160 CDRT15L2A8MXV6 281 aa5.03□□□□□ -1.6
CCL20-204ENST00000489160 BTBD18B2RXH4 712 aa5.03□□□□□ -1.6
CCL20-204ENST00000489160 J3KR12 359 aa5.03□□□□□ -1.6
CCL20-204ENST00000489160 HSPA12AO43301 675 aa5.03□□□□□ -1.6
CCL20-204ENST00000489160 DAB1O75553 588 aa5.03□□□□□ -1.6
CCL20-204ENST00000489160 JRKO75564 520 aa5.03□□□□□ -1.6
CCL20-204ENST00000489160 FTCDO95954 541 aa5.03□□□□□ -1.6
CCL20-204ENST00000489160 RB1P06400 928 aa5.03□□□□□ -1.6
CCL20-204ENST00000489160 HNRNPH1P31943 449 aaKnown RBP5.03□□□□□ -1.6
CCL20-204ENST00000489160 RPL3P39023 403 aaKnown RBP5.03□□□□□ -1.6
CCL20-204ENST00000489160 AMTP48728 403 aa5.03□□□□□ -1.6
CCL20-204ENST00000489160 COMPP49747 757 aaPredicted RBP5.03□□□□□ -1.6
CCL20-204ENST00000489160 KRT83P78385 493 aa5.03□□□□□ -1.6
CCL20-204ENST00000489160 EPS8Q12929 822 aa5.03□□□□□ -1.6
CCL20-204ENST00000489160 STK4Q13043 487 aa5.03□□□□□ -1.6
CCL20-204ENST00000489160 CDONQ4KMG0 1287 aa5.03□□□□□ -1.6
CCL20-204ENST00000489160 GGNBP1Q5YKI7 109 aa5.03□□□□□ -1.6
CCL20-204ENST00000489160 FAM47EQ6ZV65 393 aa5.03□□□□□ -1.6
CCL20-204ENST00000489160 PRPF39Q86UA1 669 aaKnown RBP5.03□□□□□ -1.6
CCL20-204ENST00000489160 HACE1Q8IYU2 909 aa5.03□□□□□ -1.6
CCL20-204ENST00000489160 SPATA6LQ8N4H0 392 aa5.03□□□□□ -1.6
CCL20-204ENST00000489160 ARL10Q8N8L6 244 aa5.03□□□□□ -1.6
CCL20-204ENST00000489160 ZKSCAN4Q969J2 545 aaPredicted RBP5.03□□□□□ -1.6
CCL20-204ENST00000489160 IGSF8Q969P0 613 aa5.03□□□□□ -1.6
CCL20-204ENST00000489160 PPP1R13BQ96KQ4 1090 aa5.03□□□□□ -1.6
CCL20-204ENST00000489160 SH3GL2Q99962 352 aa5.03□□□□□ -1.6
CCL20-204ENST00000489160 SLC28A3Q9HAS3 691 aa5.03□□□□□ -1.6
CCL20-204ENST00000489160 CCDC177Q9NQR7 707 aaPredicted RBP5.03□□□□□ -1.6
CCL20-204ENST00000489160 CDC14AQ9UNH5 594 aa5.03□□□□□ -1.6
CCL20-204ENST00000489160 MYMKA6NI61 221 aa5.02□□□□□ -1.61
CCL20-204ENST00000489160 HS6ST1O60243 411 aa5.02□□□□□ -1.61
CCL20-204ENST00000489160 ZIC3O60481 467 aa5.02□□□□□ -1.61
CCL20-204ENST00000489160 CYC1P08574 325 aa5.02□□□□□ -1.61
CCL20-204ENST00000489160 GABRB1P18505 474 aa5.02□□□□□ -1.61
CCL20-204ENST00000489160 SCP2P22307 547 aa5.02□□□□□ -1.61
CCL20-204ENST00000489160 CDC25AP30304 524 aa5.02□□□□□ -1.61
CCL20-204ENST00000489160 GCH1P30793 250 aa5.02□□□□□ -1.61
CCL20-204ENST00000489160 HOXA13P31271 388 aaPredicted RBP5.02□□□□□ -1.61
CCL20-204ENST00000489160 HOXC9P31274 260 aa5.02□□□□□ -1.61
CCL20-204ENST00000489160 EIF2DP41214 584 aaKnown RBP5.02□□□□□ -1.61
CCL20-204ENST00000489160 TNNT3P45378 269 aaPredicted RBP5.02□□□□□ -1.61
CCL20-204ENST00000489160 LMAN1P49257 510 aa5.02□□□□□ -1.61
CCL20-204ENST00000489160 MXI1P50539 228 aa5.02□□□□□ -1.61
CCL20-204ENST00000489160 CLCN3P51790 818 aa5.02□□□□□ -1.61
CCL20-204ENST00000489160 GALCP54803 685 aa5.02□□□□□ -1.61
CCL20-204ENST00000489160 ABATP80404 500 aa5.02□□□□□ -1.61
CCL20-204ENST00000489160 DSC1Q08554 894 aa5.02□□□□□ -1.61
CCL20-204ENST00000489160 ACSM2AQ08AH3 577 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms