RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 CYP1A1P04798 512 aaPredicted RBP16.1■□□□□ 0.17
USP48-210ENST00000489108 KRT3P12035 628 aa16.1■□□□□ 0.17
USP48-210ENST00000489108 ZNF28P17035 718 aa16.1■□□□□ 0.17
USP48-210ENST00000489108 GPD1P21695 349 aa16.1■□□□□ 0.17
USP48-210ENST00000489108 SCNN1BP51168 640 aa16.1■□□□□ 0.17
USP48-210ENST00000489108 NSUN2Q08J23 767 aaKnown RBP eCLIP16.1■□□□□ 0.17
USP48-210ENST00000489108 MAP7Q14244 749 aa16.1■□□□□ 0.17
USP48-210ENST00000489108 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.1■□□□□ 0.17
USP48-210ENST00000489108 WDR59Q6PJI9 974 aa16.1■□□□□ 0.17
USP48-210ENST00000489108 HSD11B1LQ7Z5J1 315 aa16.1■□□□□ 0.17
USP48-210ENST00000489108 FAM114A1Q8IWE2 563 aa16.1■□□□□ 0.17
USP48-210ENST00000489108 EPS8L1Q8TE68 723 aa16.1■□□□□ 0.17
USP48-210ENST00000489108 DTD2Q96FN9 168 aa16.1■□□□□ 0.17
USP48-210ENST00000489108 SCARF2Q96GP6 870 aaPredicted RBP16.1■□□□□ 0.17
USP48-210ENST00000489108 CINPQ9BW66 212 aaPredicted RBP16.1■□□□□ 0.17
USP48-210ENST00000489108 NAA15Q9BXJ9 866 aaKnown RBP16.1■□□□□ 0.17
USP48-210ENST00000489108 IGSF5Q9NSI5 407 aa16.1■□□□□ 0.17
USP48-210ENST00000489108 CUEDC1Q9NWM3 386 aaPredicted RBP16.1■□□□□ 0.17
USP48-210ENST00000489108 CROTQ9UKG9 612 aa16.1■□□□□ 0.17
USP48-210ENST00000489108 FZD10Q9ULW2 581 aa16.1■□□□□ 0.17
USP48-210ENST00000489108 CDC14CA4D256 554 aa16.09■□□□□ 0.17
USP48-210ENST00000489108 HEXIM1O94992 359 aaKnown RBP16.09■□□□□ 0.17
USP48-210ENST00000489108 CHRNB2P17787 502 aa16.09■□□□□ 0.17
USP48-210ENST00000489108 VIPR1P32241 457 aa16.09■□□□□ 0.17
USP48-210ENST00000489108 NDST2P52849 883 aa16.09■□□□□ 0.17
USP48-210ENST00000489108 NFATC2Q13469 925 aa16.09■□□□□ 0.17
USP48-210ENST00000489108 PTPRRQ15256 657 aa16.09■□□□□ 0.17
USP48-210ENST00000489108 MAN2A1Q16706 1144 aa16.09■□□□□ 0.17
USP48-210ENST00000489108 PYCR3Q53H96 274 aa16.09■□□□□ 0.17
USP48-210ENST00000489108 RAET1GQ6H3X3 334 aa16.09■□□□□ 0.17
USP48-210ENST00000489108 C6orf15Q6UXA7 325 aaPredicted RBP16.09■□□□□ 0.17
USP48-210ENST00000489108 Q6ZVL8 140 aa16.09■□□□□ 0.17
USP48-210ENST00000489108 MARK2Q7KZI7 788 aaKnown RBP16.09■□□□□ 0.17
USP48-210ENST00000489108 SFRP1Q8N474 314 aa16.09■□□□□ 0.17
USP48-210ENST00000489108 OR2M4Q96R27 311 aa16.09■□□□□ 0.17
USP48-210ENST00000489108 ULBP3Q9BZM4 244 aa16.09■□□□□ 0.17
USP48-210ENST00000489108 NDST4Q9H3R1 872 aa16.09■□□□□ 0.17
USP48-210ENST00000489108 KCTD5Q9NXV2 234 aa16.09■□□□□ 0.17
USP48-210ENST00000489108 NOCTQ9UK39 431 aaKnown RBP16.09■□□□□ 0.17
USP48-210ENST00000489108 ARHGAP42A6NI28 874 aa16.08■□□□□ 0.16
USP48-210ENST00000489108 FGF10O15520 208 aaPredicted RBP16.08■□□□□ 0.16
USP48-210ENST00000489108 DNAJB5O75953 348 aa16.08■□□□□ 0.16
USP48-210ENST00000489108 DCTP40126 519 aa16.08■□□□□ 0.16
USP48-210ENST00000489108 MAPK9P45984 424 aa16.08■□□□□ 0.16
USP48-210ENST00000489108 PMS2P54278 862 aa16.08■□□□□ 0.16
USP48-210ENST00000489108 FMO1Q01740 532 aa16.08■□□□□ 0.16
USP48-210ENST00000489108 HHEXQ03014 270 aa16.08■□□□□ 0.16
USP48-210ENST00000489108 FOXM1Q08050 763 aa16.08■□□□□ 0.16
USP48-210ENST00000489108 PTP4A2Q12974 167 aa16.08■□□□□ 0.16
USP48-210ENST00000489108 EIF2S3LQ2VIR3 472 aaKnown RBP16.08■□□□□ 0.16
USP48-210ENST00000489108 VWA3BQ502W6 1294 aa16.08■□□□□ 0.16
USP48-210ENST00000489108 ARHGAP36Q6ZRI8 547 aa16.08■□□□□ 0.16
USP48-210ENST00000489108 RFLNAQ6ZTI6 216 aa16.08■□□□□ 0.16
USP48-210ENST00000489108 GALNT6Q8NCL4 622 aa16.08■□□□□ 0.16
USP48-210ENST00000489108 FNIP1Q8TF40 1166 aa16.08■□□□□ 0.16
USP48-210ENST00000489108 SELENOOQ9BVL4 669 aa16.08■□□□□ 0.16
USP48-210ENST00000489108 CASS4Q9NQ75 786 aa16.08■□□□□ 0.16
USP48-210ENST00000489108 MAP4K5Q9Y4K4 846 aa16.08■□□□□ 0.16
USP48-210ENST00000489108 PCDHGC4Q9Y5F7 938 aa16.08■□□□□ 0.16
USP48-210ENST00000489108 OAS3Q9Y6K5 1087 aaKnown RBP16.08■□□□□ 0.16
USP48-210ENST00000489108 LRBAP50851 2863 aa16.08■□□□□ 0.16
USP48-210ENST00000489108 PIPSLA2A3N6 862 aa16.07■□□□□ 0.16
USP48-210ENST00000489108 CCP110O43303 1012 aa16.07■□□□□ 0.16
USP48-210ENST00000489108 DDAH2O95865 285 aa16.07■□□□□ 0.16
USP48-210ENST00000489108 UCHL3P15374 230 aa16.07■□□□□ 0.16
USP48-210ENST00000489108 LHCGRP22888 699 aa16.07■□□□□ 0.16
USP48-210ENST00000489108 TEAD1P28347 426 aa16.07■□□□□ 0.16
USP48-210ENST00000489108 GPR1P46091 355 aa16.07■□□□□ 0.16
USP48-210ENST00000489108 TPI1P60174 286 aa16.07■□□□□ 0.16
USP48-210ENST00000489108 CDR2Q01850 454 aa16.07■□□□□ 0.16
USP48-210ENST00000489108 NADK2Q4G0N4 442 aa16.07■□□□□ 0.16
USP48-210ENST00000489108 MIIPQ5JXC2 388 aa16.07■□□□□ 0.16
USP48-210ENST00000489108 TRIM74Q86UV6 250 aa16.07■□□□□ 0.16
USP48-210ENST00000489108 ZNF677Q86XU0 584 aa16.07■□□□□ 0.16
USP48-210ENST00000489108 PDCD6IPQ8WUM4 868 aaKnown RBP16.07■□□□□ 0.16
USP48-210ENST00000489108 STK33Q9BYT3 514 aa16.07■□□□□ 0.16
USP48-210ENST00000489108 TRIM55Q9BYV6 548 aa16.07■□□□□ 0.16
USP48-210ENST00000489108 TWSG1Q9GZX9 223 aa16.07■□□□□ 0.16
USP48-210ENST00000489108 SARS2Q9NP81 518 aaKnown RBP16.07■□□□□ 0.16
USP48-210ENST00000489108 SIDT1Q9NXL6 827 aaKnown RBP16.07■□□□□ 0.16
USP48-210ENST00000489108 CD84Q9UIB8 345 aa16.07■□□□□ 0.16
USP48-210ENST00000489108 SRPK3Q9UPE1 567 aa16.07■□□□□ 0.16
USP48-210ENST00000489108 A0A0U1RQS6 177 aa16.06■□□□□ 0.16
USP48-210ENST00000489108 F8VZ95 297 aa16.06■□□□□ 0.16
USP48-210ENST00000489108 INPP4BO15327 924 aa16.06■□□□□ 0.16
USP48-210ENST00000489108 HTRA2O43464 458 aaPredicted RBP16.06■□□□□ 0.16
USP48-210ENST00000489108 CREG1O75629 220 aa16.06■□□□□ 0.16
USP48-210ENST00000489108 GFPT2O94808 682 aa16.06■□□□□ 0.16
USP48-210ENST00000489108 SOD1P00441 154 aa16.06■□□□□ 0.16
USP48-210ENST00000489108 PRKCSHP14314 528 aaPredicted RBP16.06■□□□□ 0.16
USP48-210ENST00000489108 TNFAIP3P21580 790 aa16.06■□□□□ 0.16
USP48-210ENST00000489108 AP1S1P61966 158 aa16.06■□□□□ 0.16
USP48-210ENST00000489108 MAMDC2Q7Z304 686 aaPredicted RBP16.06■□□□□ 0.16
USP48-210ENST00000489108 TECPR1Q7Z6L1 1165 aa16.06■□□□□ 0.16
USP48-210ENST00000489108 TSPAN33Q86UF1 283 aa16.06■□□□□ 0.16
USP48-210ENST00000489108 APLFQ8IW19 511 aaPredicted RBP16.06■□□□□ 0.16
USP48-210ENST00000489108 SPOCK2Q92563 424 aa16.06■□□□□ 0.16
USP48-210ENST00000489108 SP110Q9HB58 689 aa16.06■□□□□ 0.16
USP48-210ENST00000489108 GPATCH2LQ9NWQ4 482 aa16.06■□□□□ 0.16
USP48-210ENST00000489108 DONSONQ9NYP3 566 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms