RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 H7C0C1 242 aa15.89■□□□□ 0.13
CTDSP1-209ENST00000488627 EPOP01588 193 aa15.89■□□□□ 0.13
CTDSP1-209ENST00000488627 ANXA6P08133 673 aa15.89■□□□□ 0.13
CTDSP1-209ENST00000488627 PIRTP0C851 137 aa15.89■□□□□ 0.13
CTDSP1-209ENST00000488627 RBP3P10745 1247 aa15.89■□□□□ 0.13
CTDSP1-209ENST00000488627 CETN2P41208 172 aa15.89■□□□□ 0.13
CTDSP1-209ENST00000488627 ATP5OP48047 213 aa15.89■□□□□ 0.13
CTDSP1-209ENST00000488627 WNT3AP56704 352 aa15.89■□□□□ 0.13
CTDSP1-209ENST00000488627 EIF3EP60228 445 aaKnown RBP15.89■□□□□ 0.13
CTDSP1-209ENST00000488627 CAMK2BQ13554 666 aa15.89■□□□□ 0.13
CTDSP1-209ENST00000488627 ELOCQ15369 112 aa15.89■□□□□ 0.13
CTDSP1-209ENST00000488627 C6orf132Q5T0Z8 1188 aa15.89■□□□□ 0.13
CTDSP1-209ENST00000488627 CCDC181Q5TID7 509 aa15.89■□□□□ 0.13
CTDSP1-209ENST00000488627 RAET1GQ6H3X3 334 aa15.89■□□□□ 0.13
CTDSP1-209ENST00000488627 UNQ6494/PRO21346Q6UXR6 183 aa15.89■□□□□ 0.13
CTDSP1-209ENST00000488627 LYSMD3Q7Z3D4 306 aa15.89■□□□□ 0.13
CTDSP1-209ENST00000488627 TMC3Q7Z5M5 1100 aa15.89■□□□□ 0.13
CTDSP1-209ENST00000488627 SLC35F3Q8IY50 421 aa15.89■□□□□ 0.13
CTDSP1-209ENST00000488627 GALNT15Q8N3T1 639 aa15.89■□□□□ 0.13
CTDSP1-209ENST00000488627 UBL4BQ8N7F7 174 aa15.89■□□□□ 0.13
CTDSP1-209ENST00000488627 MRGPRX2Q96LB1 330 aa15.89■□□□□ 0.13
CTDSP1-209ENST00000488627 CNOT6Q9ULM6 557 aaKnown RBP15.89■□□□□ 0.13
CTDSP1-209ENST00000488627 SLC17A4Q9Y2C5 497 aa15.89■□□□□ 0.13
CTDSP1-209ENST00000488627 ANKRD36A6QL64 1941 aa15.89■□□□□ 0.13
CTDSP1-209ENST00000488627 TP53BP1Q12888 1972 aaPredicted RBP15.89■□□□□ 0.13
CTDSP1-209ENST00000488627 FRYQ5TBA9 3013 aa15.89■□□□□ 0.13
CTDSP1-209ENST00000488627 KNTC1P50748 2209 aa15.88■□□□□ 0.13
CTDSP1-209ENST00000488627 TCRBV7S2A1N4TA0A589 114 aa15.88■□□□□ 0.13
CTDSP1-209ENST00000488627 PRSS38A1L453 326 aa15.88■□□□□ 0.13
CTDSP1-209ENST00000488627 EME2A4GXA9 379 aaPredicted RBP15.88■□□□□ 0.13
CTDSP1-209ENST00000488627 RGSL1A5PLK6 1076 aa15.88■□□□□ 0.13
CTDSP1-209ENST00000488627 KRT86O43790 486 aa15.88■□□□□ 0.13
CTDSP1-209ENST00000488627 PROS1P07225 676 aa15.88■□□□□ 0.13
CTDSP1-209ENST00000488627 CTSEP14091 401 aa15.88■□□□□ 0.13
CTDSP1-209ENST00000488627 GPR1P46091 355 aa15.88■□□□□ 0.13
CTDSP1-209ENST00000488627 POLD2P49005 469 aa15.88■□□□□ 0.13
CTDSP1-209ENST00000488627 DAB2P98082 770 aa15.88■□□□□ 0.13
CTDSP1-209ENST00000488627 INSM1Q01101 510 aaPredicted RBP15.88■□□□□ 0.13
CTDSP1-209ENST00000488627 TCEA2Q15560 299 aa15.88■□□□□ 0.13
CTDSP1-209ENST00000488627 HENMT1Q5T8I9 393 aaKnown RBP15.88■□□□□ 0.13
CTDSP1-209ENST00000488627 CCL4L1Q8NHW4 92 aa15.88■□□□□ 0.13
CTDSP1-209ENST00000488627 SCARF2Q96GP6 870 aaPredicted RBP15.88■□□□□ 0.13
CTDSP1-209ENST00000488627 COX14Q96I36 57 aa15.88■□□□□ 0.13
CTDSP1-209ENST00000488627 TMEM168Q9H0V1 697 aa15.88■□□□□ 0.13
CTDSP1-209ENST00000488627 ZFYVE1Q9HBF4 777 aa15.88■□□□□ 0.13
CTDSP1-209ENST00000488627 CYP4F12Q9HCS2 524 aa15.88■□□□□ 0.13
CTDSP1-209ENST00000488627 SHOC2Q9UQ13 582 aa15.88■□□□□ 0.13
CTDSP1-209ENST00000488627 SPO11Q9Y5K1 396 aa15.88■□□□□ 0.13
CTDSP1-209ENST00000488627 GOLGA6CA6NDK9 693 aa15.87■□□□□ 0.13
CTDSP1-209ENST00000488627 GOLGA6BA6NDN3 693 aa15.87■□□□□ 0.13
CTDSP1-209ENST00000488627 F5H423 210 aaPredicted RBP15.87■□□□□ 0.13
CTDSP1-209ENST00000488627 AURKAO14965 403 aa15.87■□□□□ 0.13
CTDSP1-209ENST00000488627 GP1BAP07359 652 aa15.87■□□□□ 0.13
CTDSP1-209ENST00000488627 GOLGA6DP0CG33 693 aa15.87■□□□□ 0.13
CTDSP1-209ENST00000488627 DUSP3P51452 185 aaPredicted RBP15.87■□□□□ 0.13
CTDSP1-209ENST00000488627 E2F1Q01094 437 aa15.87■□□□□ 0.13
CTDSP1-209ENST00000488627 GUSBP11Q6P575 273 aa15.87■□□□□ 0.13
CTDSP1-209ENST00000488627 OGFOD3Q6PK18 319 aa15.87■□□□□ 0.13
CTDSP1-209ENST00000488627 NRROSQ86YC3 692 aa15.87■□□□□ 0.13
CTDSP1-209ENST00000488627 CDKL3Q8IVW4 592 aaPredicted RBP15.87■□□□□ 0.13
CTDSP1-209ENST00000488627 CACTIN-AS1Q8N1I8 211 aa15.87■□□□□ 0.13
CTDSP1-209ENST00000488627 KDF1Q8NAX2 398 aaPredicted RBP15.87■□□□□ 0.13
CTDSP1-209ENST00000488627 GPR26Q8NDV2 337 aa15.87■□□□□ 0.13
CTDSP1-209ENST00000488627 CCHCR1Q8TD31 782 aa15.87■□□□□ 0.13
CTDSP1-209ENST00000488627 UBE2Q2Q8WVN8 375 aa15.87■□□□□ 0.13
CTDSP1-209ENST00000488627 GBA3Q9H227 469 aa15.87■□□□□ 0.13
CTDSP1-209ENST00000488627 FAM83DQ9H4H8 585 aa15.87■□□□□ 0.13
CTDSP1-209ENST00000488627 GRPEL1Q9HAV7 217 aa15.87■□□□□ 0.13
CTDSP1-209ENST00000488627 GOLGA6AQ9NYA3 693 aa15.87■□□□□ 0.13
CTDSP1-209ENST00000488627 NCKIPSDQ9NZQ3 722 aa15.87■□□□□ 0.13
CTDSP1-209ENST00000488627 R3HDM2Q9Y2K5 976 aaKnown RBP15.87■□□□□ 0.13
CTDSP1-209ENST00000488627 TMEM98Q9Y2Y6 226 aa15.87■□□□□ 0.13
CTDSP1-209ENST00000488627 ZNF711Q9Y462 761 aa15.87■□□□□ 0.13
CTDSP1-209ENST00000488627 ST14Q9Y5Y6 855 aa15.87■□□□□ 0.13
CTDSP1-209ENST00000488627 TDRD6O60522 2096 aaKnown RBP15.87■□□□□ 0.13
CTDSP1-209ENST00000488627 ASPMQ8IZT6 3477 aa15.86■□□□□ 0.13
CTDSP1-209ENST00000488627 FADS2P1A8MWK0 482 aa15.86■□□□□ 0.13
CTDSP1-209ENST00000488627 OPA1O60313 960 aa15.86■□□□□ 0.13
CTDSP1-209ENST00000488627 PYGLP06737 847 aa15.86■□□□□ 0.13
CTDSP1-209ENST00000488627 IVLP07476 585 aa15.86■□□□□ 0.13
CTDSP1-209ENST00000488627 CCDC175P0C221 793 aa15.86■□□□□ 0.13
CTDSP1-209ENST00000488627 CHRNA4P43681 627 aa15.86■□□□□ 0.13
CTDSP1-209ENST00000488627 MPP3Q13368 585 aa15.86■□□□□ 0.13
CTDSP1-209ENST00000488627 NR0B2Q15466 257 aa15.86■□□□□ 0.13
CTDSP1-209ENST00000488627 SIRPB2Q5JXA9 342 aa15.86■□□□□ 0.13
CTDSP1-209ENST00000488627 ANKRD20A2Q5SQ80 823 aa15.86■□□□□ 0.13
CTDSP1-209ENST00000488627 HES3Q5TGS1 186 aa15.86■□□□□ 0.13
CTDSP1-209ENST00000488627 ANKRD20A1Q5TYW2 823 aa15.86■□□□□ 0.13
CTDSP1-209ENST00000488627 ANKRD20A3Q5VUR7 823 aa15.86■□□□□ 0.13
CTDSP1-209ENST00000488627 DARS2Q6PI48 645 aaKnown RBP15.86■□□□□ 0.13
CTDSP1-209ENST00000488627 TRIM74Q86UV6 250 aa15.86■□□□□ 0.13
CTDSP1-209ENST00000488627 GKN2Q86XP6 184 aa15.86■□□□□ 0.13
CTDSP1-209ENST00000488627 SLC35B2Q8TB61 432 aa15.86■□□□□ 0.13
CTDSP1-209ENST00000488627 IFI44Q8TCB0 444 aa15.86■□□□□ 0.13
CTDSP1-209ENST00000488627 GPBAR1Q8TDU6 330 aa15.86■□□□□ 0.13
CTDSP1-209ENST00000488627 HIC2Q96JB3 615 aa15.86■□□□□ 0.13
CTDSP1-209ENST00000488627 SPATA13Q96N96 652 aa15.86■□□□□ 0.13
CTDSP1-209ENST00000488627 CARS2Q9HA77 564 aaKnown RBP15.86■□□□□ 0.13
CTDSP1-209ENST00000488627 PKD2L2Q9NZM6 624 aa15.86■□□□□ 0.13
CTDSP1-209ENST00000488627 RSPH14Q9UHP6 348 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms