RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 ERVK-11Q9UQG0 969 aa3.81□□□□□ -1.8
CCDC66-221ENST00000487739 GREB1LQ9C091 1923 aaPredicted RBP3.8□□□□□ -1.8
CCDC66-221ENST00000487739 IGKV3D-20A0A0C4DH25 116 aa3.8□□□□□ -1.8
CCDC66-221ENST00000487739 PCDH7O60245 1069 aa3.8□□□□□ -1.8
CCDC66-221ENST00000487739 PGM1P36871 562 aa3.8□□□□□ -1.8
CCDC66-221ENST00000487739 CDH15P55291 814 aa3.8□□□□□ -1.8
CCDC66-221ENST00000487739 ISL1P61371 349 aa3.8□□□□□ -1.8
CCDC66-221ENST00000487739 NFIL3Q16649 462 aa3.8□□□□□ -1.8
CCDC66-221ENST00000487739 CCDC96Q2M329 555 aa3.8□□□□□ -1.8
CCDC66-221ENST00000487739 TTI2Q6NXR4 508 aa3.8□□□□□ -1.8
CCDC66-221ENST00000487739 SLC22A25Q6T423 547 aa3.8□□□□□ -1.8
CCDC66-221ENST00000487739 LRRC8DQ7L1W4 858 aa3.8□□□□□ -1.8
CCDC66-221ENST00000487739 SPEM1Q8N4L4 309 aa3.8□□□□□ -1.8
CCDC66-221ENST00000487739 PIGTQ969N2 578 aa3.8□□□□□ -1.8
CCDC66-221ENST00000487739 ST6GAL2Q96JF0 529 aa3.8□□□□□ -1.8
CCDC66-221ENST00000487739 ZNF354BQ96LW1 612 aa3.8□□□□□ -1.8
CCDC66-221ENST00000487739 HEMGNQ9BXL5 484 aa3.8□□□□□ -1.8
CCDC66-221ENST00000487739 TTYH1Q9H313 450 aaPredicted RBP3.8□□□□□ -1.8
CCDC66-221ENST00000487739 HSPB7Q9UBY9 170 aa3.8□□□□□ -1.8
CCDC66-221ENST00000487739 CNOT7Q9UIV1 285 aaKnown RBP3.8□□□□□ -1.8
CCDC66-221ENST00000487739 GAGE10A6NGK3 116 aa3.79□□□□□ -1.8
CCDC66-221ENST00000487739 BLOC1S5-TXNDC5H3BN57 136 aa3.79□□□□□ -1.8
CCDC66-221ENST00000487739 PSMC2P35998 433 aaKnown RBP3.79□□□□□ -1.8
CCDC66-221ENST00000487739 GABRB2P47870 512 aa3.79□□□□□ -1.8
CCDC66-221ENST00000487739 SORDQ00796 357 aa3.79□□□□□ -1.8
CCDC66-221ENST00000487739 UBE3AQ05086 875 aa3.79□□□□□ -1.8
CCDC66-221ENST00000487739 OS9Q13438 667 aaPredicted RBP3.79□□□□□ -1.8
CCDC66-221ENST00000487739 NAE1Q13564 534 aa3.79□□□□□ -1.8
CCDC66-221ENST00000487739 TDGQ13569 410 aa3.79□□□□□ -1.8
CCDC66-221ENST00000487739 SLC27A1Q6PCB7 646 aa3.79□□□□□ -1.8
CCDC66-221ENST00000487739 PCDH20Q8N6Y1 951 aaKnown RBP3.79□□□□□ -1.8
CCDC66-221ENST00000487739 ADAD2Q8NCV1 583 aaKnown RBP3.79□□□□□ -1.8
CCDC66-221ENST00000487739 SCRN2Q96FV2 425 aa3.79□□□□□ -1.8
CCDC66-221ENST00000487739 QRFPRQ96P65 431 aa3.79□□□□□ -1.8
CCDC66-221ENST00000487739 FAM110AQ9BQ89 295 aa3.79□□□□□ -1.8
CCDC66-221ENST00000487739 NEURL2Q9BR09 285 aa3.79□□□□□ -1.8
CCDC66-221ENST00000487739 UPF2Q9HAU5 1272 aaKnown RBP3.79□□□□□ -1.8
CCDC66-221ENST00000487739 MAP3K20Q9NYL2 800 aaKnown RBP3.79□□□□□ -1.8
CCDC66-221ENST00000487739 HSF4Q9ULV5 492 aa3.79□□□□□ -1.8
CCDC66-221ENST00000487739 COL2A1P02458 1487 aaPredicted RBP3.79□□□□□ -1.8
CCDC66-221ENST00000487739 PTPRCP08575 1304 aa3.78□□□□□ -1.8
CCDC66-221ENST00000487739 IGLV5-45A0A087WSX0 123 aa3.78□□□□□ -1.8
CCDC66-221ENST00000487739 A0A1B0GVY2 172 aa3.78□□□□□ -1.8
CCDC66-221ENST00000487739 TAF4O00268 1085 aa3.78□□□□□ -1.8
CCDC66-221ENST00000487739 ZNHIT1O43257 154 aa3.78□□□□□ -1.8
CCDC66-221ENST00000487739 IGHV4-39P01824 125 aa3.78□□□□□ -1.8
CCDC66-221ENST00000487739 PATE4P0C8F1 98 aa3.78□□□□□ -1.8
CCDC66-221ENST00000487739 CSNK2A1P68400 391 aaPredicted RBP3.78□□□□□ -1.8
CCDC66-221ENST00000487739 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.78□□□□□ -1.8
CCDC66-221ENST00000487739 FOXM1Q08050 763 aa3.78□□□□□ -1.8
CCDC66-221ENST00000487739 TMEM35AQ53FP2 167 aa3.78□□□□□ -1.8
CCDC66-221ENST00000487739 C10orf62Q5T681 223 aaPredicted RBP3.78□□□□□ -1.8
CCDC66-221ENST00000487739 SFMBT2Q5VUG0 894 aa3.78□□□□□ -1.8
CCDC66-221ENST00000487739 FRG2Q64ET8 278 aa3.78□□□□□ -1.8
CCDC66-221ENST00000487739 DUS1LQ6P1R4 473 aaKnown RBP3.78□□□□□ -1.8
CCDC66-221ENST00000487739 SLC46A3Q7Z3Q1 461 aa3.78□□□□□ -1.8
CCDC66-221ENST00000487739 CSNK2A3Q8NEV1 391 aa3.78□□□□□ -1.8
CCDC66-221ENST00000487739 TM9SF4Q92544 642 aa3.78□□□□□ -1.8
CCDC66-221ENST00000487739 SLC41A2Q96JW4 573 aa3.78□□□□□ -1.8
CCDC66-221ENST00000487739 H2AFJQ9BTM1 129 aa3.78□□□□□ -1.8
CCDC66-221ENST00000487739 FSD1Q9BTV5 496 aa3.78□□□□□ -1.8
CCDC66-221ENST00000487739 IFIH1Q9BYX4 1025 aaKnown RBP3.78□□□□□ -1.8
CCDC66-221ENST00000487739 PLEKHA4Q9H4M7 779 aa3.78□□□□□ -1.8
CCDC66-221ENST00000487739 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.78□□□□□ -1.8
CCDC66-221ENST00000487739 KCNK7Q9Y2U2 307 aa3.78□□□□□ -1.8
CCDC66-221ENST00000487739 TEX13CA0A0J9YWL9 993 aa3.77□□□□□ -1.81
CCDC66-221ENST00000487739 SEC14L5O43304 696 aa3.77□□□□□ -1.81
CCDC66-221ENST00000487739 ZNF500O60304 480 aaPredicted RBP3.77□□□□□ -1.81
CCDC66-221ENST00000487739 NBNO60934 754 aa3.77□□□□□ -1.81
CCDC66-221ENST00000487739 FTCDO95954 541 aa3.77□□□□□ -1.81
CCDC66-221ENST00000487739 POLR2CP19387 275 aaPredicted RBP3.77□□□□□ -1.81
CCDC66-221ENST00000487739 FASLGP48023 281 aa3.77□□□□□ -1.81
CCDC66-221ENST00000487739 FAM171BQ6P995 826 aa3.77□□□□□ -1.81
CCDC66-221ENST00000487739 BRAT1Q6PJG6 821 aa3.77□□□□□ -1.81
CCDC66-221ENST00000487739 QSOX2Q6ZRP7 698 aa3.77□□□□□ -1.81
CCDC66-221ENST00000487739 NKAPQ8N5F7 415 aaKnown RBP3.77□□□□□ -1.81
CCDC66-221ENST00000487739 TRIM63Q969Q1 353 aa3.77□□□□□ -1.81
CCDC66-221ENST00000487739 ORAI1Q96D31 301 aa3.77□□□□□ -1.81
CCDC66-221ENST00000487739 STAMBPL1Q96FJ0 436 aa3.77□□□□□ -1.81
CCDC66-221ENST00000487739 PCYT2Q99447 389 aa3.77□□□□□ -1.81
CCDC66-221ENST00000487739 ISCA1Q9BUE6 129 aa3.77□□□□□ -1.81
CCDC66-221ENST00000487739 TKTL2Q9H0I9 626 aa3.77□□□□□ -1.81
CCDC66-221ENST00000487739 ZNF624Q9P2J8 865 aaPredicted RBP3.77□□□□□ -1.81
CCDC66-221ENST00000487739 POLG2Q9UHN1 485 aa3.77□□□□□ -1.81
CCDC66-221ENST00000487739 A4GNTQ9UNA3 340 aa3.77□□□□□ -1.81
CCDC66-221ENST00000487739 PCDHGB3Q9Y5G1 929 aa3.77□□□□□ -1.81
CCDC66-221ENST00000487739 TAF1P21675 1872 aa3.76□□□□□ -1.81
CCDC66-221ENST00000487739 SMIM1B2RUZ4 78 aa3.76□□□□□ -1.81
CCDC66-221ENST00000487739 SPINT2O43291 252 aa3.76□□□□□ -1.81
CCDC66-221ENST00000487739 SYNGR3O43761 229 aa3.76□□□□□ -1.81
CCDC66-221ENST00000487739 EXTL3O43909 919 aa3.76□□□□□ -1.81
CCDC66-221ENST00000487739 HOXB5P09067 269 aa3.76□□□□□ -1.81
CCDC66-221ENST00000487739 FAM106CPP0CH98 169 aa3.76□□□□□ -1.81
CCDC66-221ENST00000487739 DCTP40126 519 aa3.76□□□□□ -1.81
CCDC66-221ENST00000487739 DRG2P55039 364 aaKnown RBP3.76□□□□□ -1.81
CCDC66-221ENST00000487739 ZC2HC1BQ5TFG8 222 aa3.76□□□□□ -1.81
CCDC66-221ENST00000487739 NAA35Q5VZE5 725 aa3.76□□□□□ -1.81
CCDC66-221ENST00000487739 HIST2H2BDQ6DRA6 164 aa3.76□□□□□ -1.81
CCDC66-221ENST00000487739 OR7E24Q6IFN5 339 aa3.76□□□□□ -1.81
CCDC66-221ENST00000487739 ATF7IPQ6VMQ6 1270 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms