RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 CHATP28329 748 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 NNMTP40261 264 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 ABCG1P45844 678 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 CAMPP49913 170 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 PMS2P54278 862 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 NANOS3P60323 173 aaKnown RBP5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 IRX6P78412 446 aaPredicted RBP5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 TRAF1Q13077 416 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 KLF9Q13886 244 aaPredicted RBP5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 GPR18Q14330 331 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 MMEL1Q495T6 779 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 LRIF1Q5T3J3 769 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 LCE5AQ5TCM9 118 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 PLEKHA7Q6IQ23 1121 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 ANKRD54Q6NXT1 300 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 KRBA2Q6ZNG9 492 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 Q6ZSV7 163 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 SEPT14Q6ZU15 432 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 POC5Q8NA72 575 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 SCCPDHQ8NBX0 429 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 HJURPQ8NCD3 748 aaPredicted RBP5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 C7orf57Q8NEG2 295 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 SLC25A28Q96A46 364 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 IFIH1Q9BYX4 1025 aaKnown RBP5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 PLK3Q9H4B4 646 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 CLK4Q9HAZ1 481 aaKnown RBP5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 MKKSQ9NPJ1 570 aaPredicted RBP5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 TMEM51Q9NW97 253 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 R3HDM2Q9Y2K5 976 aaKnown RBP5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 STON1Q9Y6Q2 735 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 MLH3Q9UHC1 1453 aa5.06□□□□□ -1.6
PRPF38A-203ENST00000487160 XIRP1Q702N8 1843 aaKnown RBP5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 IGLV5-39A0A0G2JS06 123 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 SYNDIG1LA6NDD5 238 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 A8MV72 311 aaPredicted RBP5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 CDRT15L2A8MXV6 281 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 MS4A18H0YCH9 400 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 TPPPO94811 219 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 FTCDO95954 541 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 DNTTP04053 509 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 CYP1A2P05177 515 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 CYC1P08574 325 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 NR2F1P10589 423 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 SELLP14151 372 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 SLC15A1P46059 708 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 RFX5P48382 616 aaPredicted RBP5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 COMPP49747 757 aaPredicted RBP5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 MFAP4P55083 255 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 ZP1P60852 638 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 ADORA2A-AS1P86434 159 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 ACSM2AQ08AH3 577 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 LRMPQ12912 555 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 NEDD9Q14511 834 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 ADIPOQQ15848 244 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 PXDC1Q5TGL8 231 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 ACSM2BQ68CK6 577 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 PMS2CLQ68D20 193 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 CFAP77Q6ZQR2 320 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 Q6ZTK2 550 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 MTSS1LQ765P7 747 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 RNF168Q8IYW5 571 aaPredicted RBP5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 SCML4Q8N228 414 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 AFAP1Q8N556 730 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 MIGA1Q8NAN2 632 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 AGBL3Q8NEM8 1001 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 DENND1AQ8TEH3 1009 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 RRNAD1Q96FB5 475 aaKnown RBP5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 URB1-AS1Q96HZ7 61 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 HARBI1Q96MB7 349 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 SEPT5Q99719 369 aaPredicted RBP5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 NDST4Q9H3R1 872 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 SLITRK6Q9H5Y7 841 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 CATSPERBQ9H7T0 1116 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 KRCC1Q9NPI7 259 aaPredicted RBP5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 HINT3Q9NQE9 182 aaKnown RBP5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 ZBTB40Q9NUA8 1239 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 OR6C3Q9NZP0 311 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 CHORDC1Q9UHD1 332 aaPredicted RBP5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 RCOR1Q9UKL0 485 aa5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 SRPRBQ9Y5M8 271 aaKnown RBP5.05□□□□□ -1.6
PRPF38A-203ENST00000487160 SYNMO15061 1565 aa5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 VWDEQ8N2E2 1590 aa5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 WDR91A4D1P6 747 aa5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 BECN2A8MW95 431 aa5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 H3BQ06 376 aaPredicted RBP5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 J3KR12 359 aa5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 VCYO14598 125 aa5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 JRKO75564 520 aa5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 SYF2O95926 243 aaKnown RBP5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 SRPRAP08240 638 aaKnown RBP5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 SAT1P21673 171 aa5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 RRM1P23921 792 aa5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 HOXA13P31271 388 aaPredicted RBP5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 NRIP1P48552 1158 aa5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 TFAP4Q01664 338 aa5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 ST3GAL1Q11201 340 aa5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 PRTGQ2VWP7 1150 aa5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 SOWAHCQ53LP3 525 aaPredicted RBP5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 PQLC2Q6ZP29 291 aa5.04□□□□□ -1.6
PRPF38A-203ENST00000487160 MRPL10Q7Z7H8 261 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms