RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 SLC6A4P31645 630 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 HSPA13P48723 471 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 SLC7A2P52569 658 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 ACLYP53396 1101 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 STX1BP61266 288 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 C5orf22Q49AR2 442 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 KANK2Q63ZY3 851 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 IL31Q6EBC2 164 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 CYP2R1Q6VVX0 501 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 OR7D4Q8NG98 312 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 TWIST2Q8WVJ9 160 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 LRCH3Q96II8 777 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 MGME1Q9BQP7 344 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 TUBB1Q9H4B7 451 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 MAP10Q9P2G4 905 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 GMPR2Q9P2T1 348 aaKnown RBP12.3□□□□□ -0.44
PTCD2-204ENST00000486995 IKZF3Q9UKT9 509 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 LZTS1Q9Y250 596 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 SPO11Q9Y5K1 396 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 AK5Q9Y6K8 562 aa12.3□□□□□ -0.44
PTCD2-204ENST00000486995 A0A0J9YYE9 177 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 A0A1B0GTL3 188 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 C7orf72A4D263 438 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 OR6B1O95007 311 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 CSPG5O95196 566 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 FGFR3P22607 806 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 SLC7A1P30825 629 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 RGRP47804 291 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 NME5P56597 212 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 GPR17Q13304 367 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 GRB7Q14451 532 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 PITRM1Q5JRX3 1037 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 PAQR3Q6TCH7 311 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 RAB44Q7Z6P3 723 aaPredicted RBP12.29□□□□□ -0.44
PTCD2-204ENST00000486995 AHI1Q8N157 1196 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 TRPC4APQ8TEL6 797 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 NAT14Q8WUY8 206 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 KIAA1191Q96A73 305 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 EME1Q96AY2 570 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 ROPN1LQ96C74 230 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 PRICKLE1Q96MT3 831 aaPredicted RBP12.29□□□□□ -0.44
PTCD2-204ENST00000486995 KCNA7Q96RP8 456 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 GPATCH1Q9BRR8 931 aaKnown RBP12.29□□□□□ -0.44
PTCD2-204ENST00000486995 SLC2A11Q9BYW1 496 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 EPB41L1Q9H4G0 881 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 COQ10BQ9H8M1 238 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 NLE1Q9NVX2 485 aaPredicted RBP12.29□□□□□ -0.44
PTCD2-204ENST00000486995 SMIM31A0A1B0GVY4 71 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 F5H5T6 163 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 CLASP2O75122 1294 aaKnown RBP12.29□□□□□ -0.44
PTCD2-204ENST00000486995 ZNF140P52738 457 aaPredicted RBP12.29□□□□□ -0.44
PTCD2-204ENST00000486995 GNA12Q03113 381 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 SREBF2Q12772 1141 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 DUSP4Q13115 394 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 KIF19Q2TAC6 998 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 HERC6Q8IVU3 1022 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 RIN3Q8TB24 985 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 GIPC2Q8TF65 315 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 UHRF1Q96T88 793 aaPredicted RBP12.29□□□□□ -0.44
PTCD2-204ENST00000486995 ZNF696Q9H7X3 374 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 INTS10Q9NVR2 710 aaKnown RBP12.29□□□□□ -0.44
PTCD2-204ENST00000486995 APPL1Q9UKG1 709 aa12.29□□□□□ -0.44
PTCD2-204ENST00000486995 TBC1D4O60343 1298 aa12.28□□□□□ -0.44
PTCD2-204ENST00000486995 GFAPP14136 432 aa12.28□□□□□ -0.44
PTCD2-204ENST00000486995 ETS2P15036 469 aa12.28□□□□□ -0.44
PTCD2-204ENST00000486995 FMO4P31512 558 aa12.28□□□□□ -0.44
PTCD2-204ENST00000486995 RPL5P46777 297 aaKnown RBP12.28□□□□□ -0.44
PTCD2-204ENST00000486995 NRF1Q16656 503 aa12.28□□□□□ -0.44
PTCD2-204ENST00000486995 GEN1Q17RS7 908 aa12.28□□□□□ -0.44
PTCD2-204ENST00000486995 VPS26BQ4G0F5 336 aa12.28□□□□□ -0.44
PTCD2-204ENST00000486995 PCYOX1LQ8NBM8 494 aa12.28□□□□□ -0.44
PTCD2-204ENST00000486995 MDGA1Q8NFP4 955 aa12.28□□□□□ -0.44
PTCD2-204ENST00000486995 OR4K2Q8NGD2 314 aa12.28□□□□□ -0.44
PTCD2-204ENST00000486995 STAG3L4Q8TBR4 150 aa12.28□□□□□ -0.44
PTCD2-204ENST00000486995 PSKH2Q96QS6 385 aa12.28□□□□□ -0.44
PTCD2-204ENST00000486995 SH3GL3Q99963 347 aa12.28□□□□□ -0.44
PTCD2-204ENST00000486995 MAGEH1Q9H213 219 aa12.28□□□□□ -0.44
PTCD2-204ENST00000486995 SYTL2Q9HCH5 934 aa12.28□□□□□ -0.44
PTCD2-204ENST00000486995 NMRK2Q9NPI5 230 aa12.28□□□□□ -0.44
PTCD2-204ENST00000486995 MARCH5Q9NX47 278 aa12.28□□□□□ -0.44
PTCD2-204ENST00000486995 TMEM161AQ9NX61 479 aa12.28□□□□□ -0.44
PTCD2-204ENST00000486995 HACD3Q9P035 362 aa12.28□□□□□ -0.44
PTCD2-204ENST00000486995 FAM50BQ9Y247 325 aa12.28□□□□□ -0.44
PTCD2-204ENST00000486995 SLC4A7Q9Y6M7 1214 aa12.28□□□□□ -0.44
PTCD2-204ENST00000486995 ZFP37Q9Y6Q3 630 aaPredicted RBP12.28□□□□□ -0.44
PTCD2-204ENST00000486995 UBA6A0AVT1 1052 aaPredicted RBP12.28□□□□□ -0.44
PTCD2-204ENST00000486995 BBIP1A8MTZ0 92 aa12.28□□□□□ -0.44
PTCD2-204ENST00000486995 H0YJX3 145 aa12.28□□□□□ -0.44
PTCD2-204ENST00000486995 H3BNC9 293 aa12.28□□□□□ -0.44
PTCD2-204ENST00000486995 KERAO60938 352 aa12.28□□□□□ -0.44
PTCD2-204ENST00000486995 RHOBTB1O94844 696 aa12.28□□□□□ -0.44
PTCD2-204ENST00000486995 TNFAIP8O95379 198 aa12.28□□□□□ -0.44
PTCD2-204ENST00000486995 CLPTM1O96005 669 aa12.28□□□□□ -0.44
PTCD2-204ENST00000486995 PRLP01236 227 aa12.28□□□□□ -0.44
PTCD2-204ENST00000486995 CAPN3P20807 821 aa12.28□□□□□ -0.44
PTCD2-204ENST00000486995 EEF1DP29692 281 aaKnown RBP12.28□□□□□ -0.44
PTCD2-204ENST00000486995 TM4SF4P48230 202 aa12.28□□□□□ -0.44
PTCD2-204ENST00000486995 CLCN2P51788 898 aa12.28□□□□□ -0.44
PTCD2-204ENST00000486995 KPNA1P52294 538 aaPredicted RBP12.28□□□□□ -0.44
PTCD2-204ENST00000486995 CREB5Q02930 508 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms