RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 KBTBD6Q86V97 674 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 WDR5BQ86VZ2 330 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 LONP2Q86WA8 852 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 TMEFF1Q8IYR6 380 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 RGL4Q8IZJ4 473 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 MMGT1Q8N4V1 131 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 POU5F2Q8N7G0 328 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 CCHCR1Q8TD31 782 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 PIH1D2Q8WWB5 315 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 IFT81Q8WYA0 676 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 CPT1BQ92523 772 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 ECHDC3Q96DC8 303 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 FEM1CQ96JP0 617 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 SPACA7Q96KW9 195 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 PWWP2AQ96N64 755 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 PPP1R2P1Q96PQ5 205 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 ADGRE3Q9BY15 652 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 HDAC8Q9BY41 377 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 GPR63Q9BZJ6 419 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 RAB17Q9H0T7 212 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 MIR1-1HGQ9H1L0 117 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 EPC1Q9H2F5 836 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 C6orf106Q9H6K1 298 aaPredicted RBP5.64□□□□□ -1.51
COPS3-208ENST00000486032 LRRC40Q9H9A6 602 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 EPB41L5Q9HCM4 733 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 BPIFA1Q9NP55 256 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 FZD3Q9NPG1 666 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 PRMT8Q9NR22 394 aaPredicted RBP5.64□□□□□ -1.51
COPS3-208ENST00000486032 VPS45Q9NRW7 570 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 USP36Q9P275 1121 aaKnown RBP5.64□□□□□ -1.51
COPS3-208ENST00000486032 CD84Q9UIB8 345 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 ANAPC5Q9UJX4 755 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 TPX2Q9ULW0 747 aaKnown RBP5.64□□□□□ -1.51
COPS3-208ENST00000486032 PHTF1Q9UMS5 762 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 SPO11Q9Y5K1 396 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 FADS3Q9Y5Q0 445 aa5.64□□□□□ -1.51
COPS3-208ENST00000486032 NUMA1Q14980 2115 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 GPR179Q6PRD1 2367 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 A0A0J9YYE9 177 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 LOC285095A0A1B0GVY8 99 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 A0A1W2PQU0 124 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 IGLON5A6NGN9 336 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 CAPN8A6NHC0 703 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 NPIPB15A6NHN6 443 aaPredicted RBP5.63□□□□□ -1.51
COPS3-208ENST00000486032 LRRC72A6NJI9 287 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 ANKRD66B4E2M5 251 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 CCL22O00626 93 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 AURKAO14965 403 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 EFSO43281 561 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 PLRG1O43660 514 aaKnown RBP5.63□□□□□ -1.51
COPS3-208ENST00000486032 AVILO75366 819 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 BANF1O75531 89 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 RPP40O75818 363 aaKnown RBP5.63□□□□□ -1.51
COPS3-208ENST00000486032 PAPSS2O95340 614 aaPredicted RBP5.63□□□□□ -1.51
COPS3-208ENST00000486032 PAK4O96013 591 aaPredicted RBP5.63□□□□□ -1.51
COPS3-208ENST00000486032 TRBC1P01850 177 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 PCCBP05166 539 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 FGF1P05230 155 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 ATXN1LP0C7T5 689 aaKnown RBP5.63□□□□□ -1.51
COPS3-208ENST00000486032 ELFN1P0C7U0 828 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 HLA-DPA1P20036 260 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 LHCGRP22888 699 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 NFKBIAP25963 317 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 MGAT1P26572 445 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 OXTRP30559 389 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 ADH7P40394 386 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 RPL21P46778 160 aaKnown RBP5.63□□□□□ -1.51
COPS3-208ENST00000486032 GRIA4P48058 902 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 LIG3P49916 1009 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 PLTPP55058 493 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 TAS2R38P59533 333 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 PPP2CBP62714 309 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 PPP2CAP67775 309 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 CRADDP78560 199 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 SARNPP82979 210 aaKnown RBP5.63□□□□□ -1.51
COPS3-208ENST00000486032 ELP6Q0PNE2 266 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 CDH17Q12864 832 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 SGCGQ13326 291 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 HLTFQ14527 1009 aaKnown RBP eCLIP5.63□□□□□ -1.51
COPS3-208ENST00000486032 KCNJ11Q14654 390 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 PTPRCAPQ14761 206 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 TRADDQ15628 312 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 MAP7D1Q3KQU3 841 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 BBS9Q3SYG4 887 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 CERCAMQ5T4B2 595 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 RNASEH2BQ5TBB1 312 aaKnown RBP5.63□□□□□ -1.51
COPS3-208ENST00000486032 ALS2CLQ60I27 953 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 SEL1L3Q68CR1 1132 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 LRRC66Q68CR7 880 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 KCTD11Q693B1 232 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 CRTC1Q6UUV9 634 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 RFLNAQ6ZTI6 216 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 MICALCLQ6ZW33 695 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 USP30Q70CQ3 517 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 GLT6D1Q7Z4J2 308 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 PCGF5Q86SE9 256 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 LINC00523Q86TU6 105 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 CCDC25Q86WR0 208 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 PPIL6Q8IXY8 311 aa5.63□□□□□ -1.51
COPS3-208ENST00000486032 OR2T34Q8NGX1 318 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms