RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 PIK3CAP42336 1068 aa6.69□□□□□ -1.34
SMC4-217ENST00000485867 TBX4P57082 545 aa6.69□□□□□ -1.34
SMC4-217ENST00000485867 SNRPFP62306 86 aaKnown RBP6.69□□□□□ -1.34
SMC4-217ENST00000485867 SULT2A1Q06520 285 aa6.69□□□□□ -1.34
SMC4-217ENST00000485867 ADIGQ0VDE8 80 aa6.69□□□□□ -1.34
SMC4-217ENST00000485867 C16orf72Q14CZ0 275 aa6.69□□□□□ -1.34
SMC4-217ENST00000485867 SPATS1Q496A3 300 aa6.69□□□□□ -1.34
SMC4-217ENST00000485867 HEATR4Q86WZ0 1026 aa6.69□□□□□ -1.34
SMC4-217ENST00000485867 FAM114A1Q8IWE2 563 aa6.69□□□□□ -1.34
SMC4-217ENST00000485867 NELFCDQ8IXH7 590 aa6.69□□□□□ -1.34
SMC4-217ENST00000485867 C12orf56Q8IXR9 622 aa6.69□□□□□ -1.34
SMC4-217ENST00000485867 CARFQ8N187 725 aa6.69□□□□□ -1.34
SMC4-217ENST00000485867 TEX19Q8NA77 164 aa6.69□□□□□ -1.34
SMC4-217ENST00000485867 PCDH19Q8TAB3 1148 aa6.69□□□□□ -1.34
SMC4-217ENST00000485867 APOBEC4Q8WW27 367 aaKnown RBP6.69□□□□□ -1.34
SMC4-217ENST00000485867 ERCC4Q92889 916 aaPredicted RBP6.69□□□□□ -1.34
SMC4-217ENST00000485867 SLC45A3Q96JT2 553 aa6.69□□□□□ -1.34
SMC4-217ENST00000485867 DDX50Q9BQ39 737 aaKnown RBP6.69□□□□□ -1.34
SMC4-217ENST00000485867 SLC17A9Q9BYT1 436 aa6.69□□□□□ -1.34
SMC4-217ENST00000485867 CDH19Q9H159 772 aa6.69□□□□□ -1.34
SMC4-217ENST00000485867 APOBEC3GQ9HC16 384 aaKnown RBP6.69□□□□□ -1.34
SMC4-217ENST00000485867 ABCC13Q9NSE7 274 aa6.69□□□□□ -1.34
SMC4-217ENST00000485867 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.69□□□□□ -1.34
SMC4-217ENST00000485867 SIRPGQ9P1W8 387 aa6.69□□□□□ -1.34
SMC4-217ENST00000485867 APEX2Q9UBZ4 518 aa6.69□□□□□ -1.34
SMC4-217ENST00000485867 DAAM1Q9Y4D1 1078 aa6.69□□□□□ -1.34
SMC4-217ENST00000485867 ABCA2Q9BZC7 2435 aa6.69□□□□□ -1.34
SMC4-217ENST00000485867 POLEQ07864 2286 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 C7orf72A4D263 438 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 K7EM74 188 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 RNF103O00237 685 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 XPO1O14980 1071 aaKnown RBP6.68□□□□□ -1.34
SMC4-217ENST00000485867 NKX2-8O15522 239 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 EXOC3O60645 756 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 PAK4O96013 591 aaPredicted RBP6.68□□□□□ -1.34
SMC4-217ENST00000485867 PRKAR1AP10644 381 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 CCL4P13236 92 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 TSHRP16473 764 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 OAS2P29728 719 aaKnown RBP6.68□□□□□ -1.34
SMC4-217ENST00000485867 UGT1A3P35503 534 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 STAT6P42226 847 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 RECQLP46063 649 aaPredicted RBP6.68□□□□□ -1.34
SMC4-217ENST00000485867 PLK1P53350 603 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 PFN3P60673 137 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 CCDC15Q0P6D6 951 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 CDC20Q12834 499 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 SLC12A1Q13621 1099 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 DLG2Q15700 870 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 PPP2R5EQ16537 467 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 ACCSLQ4AC99 568 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 FAM26FQ5R3K3 315 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 ARHGAP17Q68EM7 881 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 KIAA1161Q6NSJ0 714 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 ERN2Q76MJ5 926 aaKnown RBP6.68□□□□□ -1.34
SMC4-217ENST00000485867 ZC3H18Q86VM9 953 aaKnown RBP6.68□□□□□ -1.34
SMC4-217ENST00000485867 CACNA2D3Q8IZS8 1091 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 LGI2Q8N0V4 545 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 ANKRD52Q8NB46 1076 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 MOCOSQ96EN8 888 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 ZSCAN31Q96LW9 406 aaPredicted RBP6.68□□□□□ -1.34
SMC4-217ENST00000485867 IPO9Q96P70 1041 aaKnown RBP6.68□□□□□ -1.34
SMC4-217ENST00000485867 KLF6Q99612 283 aaPredicted RBP6.68□□□□□ -1.34
SMC4-217ENST00000485867 SLC13A1Q9BZW2 595 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 LRRC4Q9HBW1 653 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 CASS4Q9NQ75 786 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 PRDM8Q9NQV8 689 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 DONSONQ9NYP3 566 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 DKK3Q9UBP4 350 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 CNOT11Q9UKZ1 510 aaKnown RBP6.68□□□□□ -1.34
SMC4-217ENST00000485867 RNF215Q9Y6U7 377 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 PDZD2O15018 2839 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 ANKRD36A6QL64 1941 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 FBN3Q75N90 2809 aa6.68□□□□□ -1.34
SMC4-217ENST00000485867 PRRC2CQ9Y520 2896 aaKnown RBP6.67□□□□□ -1.34
SMC4-217ENST00000485867 ANKRD34BA5PLL1 514 aa6.67□□□□□ -1.34
SMC4-217ENST00000485867 EFCAB7A8K855 629 aa6.67□□□□□ -1.34
SMC4-217ENST00000485867 FPGTO14772 594 aa6.67□□□□□ -1.34
SMC4-217ENST00000485867 MOCS2O96007 188 aaPredicted RBP6.67□□□□□ -1.34
SMC4-217ENST00000485867 LDLRP01130 860 aa6.67□□□□□ -1.34
SMC4-217ENST00000485867 CHRNA3P32297 505 aa6.67□□□□□ -1.34
SMC4-217ENST00000485867 NASPP49321 788 aaPredicted RBP6.67□□□□□ -1.34
SMC4-217ENST00000485867 RAD23BP54727 409 aa6.67□□□□□ -1.34
SMC4-217ENST00000485867 SLC8A3P57103 927 aa6.67□□□□□ -1.34
SMC4-217ENST00000485867 DAOAP59103 153 aa6.67□□□□□ -1.34
SMC4-217ENST00000485867 RPS21P63220 83 aaKnown RBP6.67□□□□□ -1.34
SMC4-217ENST00000485867 ARHGAP44Q17R89 818 aa6.67□□□□□ -1.34
SMC4-217ENST00000485867 GOLGA7BQ2TAP0 167 aa6.67□□□□□ -1.34
SMC4-217ENST00000485867 DEFB109BQ30KR1 87 aa6.67□□□□□ -1.34
SMC4-217ENST00000485867 C1orf220Q5T0J3 134 aa6.67□□□□□ -1.34
SMC4-217ENST00000485867 PHF19Q5T6S3 580 aa6.67□□□□□ -1.34
SMC4-217ENST00000485867 FAXCQ5TGI0 409 aa6.67□□□□□ -1.34
SMC4-217ENST00000485867 CXorf57Q6NSI4 855 aaKnown RBP6.67□□□□□ -1.34
SMC4-217ENST00000485867 TCTN3Q6NUS6 607 aa6.67□□□□□ -1.34
SMC4-217ENST00000485867 LVRNQ6Q4G3 990 aa6.67□□□□□ -1.34
SMC4-217ENST00000485867 CCDC73Q6ZRK6 1079 aa6.67□□□□□ -1.34
SMC4-217ENST00000485867 SPRED1Q7Z699 444 aa6.67□□□□□ -1.34
SMC4-217ENST00000485867 CIR1Q86X95 450 aaPredicted RBP6.67□□□□□ -1.34
SMC4-217ENST00000485867 SIX6OS1Q8N1H7 587 aa6.67□□□□□ -1.34
SMC4-217ENST00000485867 SCML4Q8N228 414 aa6.67□□□□□ -1.34
SMC4-217ENST00000485867 FSTL5Q8N475 847 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms