RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 DCHS1Q96JQ0 3298 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 CACNA1EQ15878 2313 aa12.48□□□□□ -0.41
PTCD1-205ENST00000485746 PRSS38A1L453 326 aa12.47□□□□□ -0.41
PTCD1-205ENST00000485746 INPP4BO15327 924 aa12.47□□□□□ -0.41
PTCD1-205ENST00000485746 CKMT1AP12532 417 aa12.47□□□□□ -0.41
PTCD1-205ENST00000485746 CD68P34810 354 aaPredicted RBP12.47□□□□□ -0.41
PTCD1-205ENST00000485746 GNPDA1P46926 289 aa12.47□□□□□ -0.41
PTCD1-205ENST00000485746 SPINT3P49223 89 aa12.47□□□□□ -0.41
PTCD1-205ENST00000485746 DPTQ07507 201 aa12.47□□□□□ -0.41
PTCD1-205ENST00000485746 MPP3Q13368 585 aa12.47□□□□□ -0.41
PTCD1-205ENST00000485746 RPS6KA1Q15418 735 aa12.47□□□□□ -0.41
PTCD1-205ENST00000485746 CDKN3Q16667 212 aa12.47□□□□□ -0.41
PTCD1-205ENST00000485746 ZNF765Q7L2R6 523 aa12.47□□□□□ -0.41
PTCD1-205ENST00000485746 TMPRSS7Q7RTY8 843 aa12.47□□□□□ -0.41
PTCD1-205ENST00000485746 TMPRSS12Q86WS5 348 aa12.47□□□□□ -0.41
PTCD1-205ENST00000485746 SDR16C5Q8N3Y7 309 aa12.47□□□□□ -0.41
PTCD1-205ENST00000485746 FAM181AQ8N9Y4 354 aa12.47□□□□□ -0.41
PTCD1-205ENST00000485746 IFI44Q8TCB0 444 aa12.47□□□□□ -0.41
PTCD1-205ENST00000485746 UBE2Q2Q8WVN8 375 aa12.47□□□□□ -0.41
PTCD1-205ENST00000485746 LRRC45Q96CN5 670 aa12.47□□□□□ -0.41
PTCD1-205ENST00000485746 PDXPQ96GD0 296 aa12.47□□□□□ -0.41
PTCD1-205ENST00000485746 HIC2Q96JB3 615 aa12.47□□□□□ -0.41
PTCD1-205ENST00000485746 FCRL5Q96RD9 977 aa12.47□□□□□ -0.41
PTCD1-205ENST00000485746 TRIB3Q96RU7 358 aa12.47□□□□□ -0.41
PTCD1-205ENST00000485746 LYSMD1Q96S90 227 aa12.47□□□□□ -0.41
PTCD1-205ENST00000485746 HERPUD2Q9BSE4 406 aa12.47□□□□□ -0.41
PTCD1-205ENST00000485746 SPATA16Q9BXB7 569 aa12.47□□□□□ -0.41
PTCD1-205ENST00000485746 TEX101Q9BY14 249 aa12.47□□□□□ -0.41
PTCD1-205ENST00000485746 MAGEE1Q9HCI5 957 aa12.47□□□□□ -0.41
PTCD1-205ENST00000485746 FGF22Q9HCT0 170 aa12.47□□□□□ -0.41
PTCD1-205ENST00000485746 PNMA8BQ9ULN7 279 aaPredicted RBP12.47□□□□□ -0.41
PTCD1-205ENST00000485746 ZNF711Q9Y462 761 aa12.47□□□□□ -0.41
PTCD1-205ENST00000485746 GPSM3Q9Y4H4 160 aa12.47□□□□□ -0.41
PTCD1-205ENST00000485746 DGKBQ9Y6T7 804 aa12.47□□□□□ -0.41
PTCD1-205ENST00000485746 TMEM131Q92545 1883 aa12.46□□□□□ -0.41
PTCD1-205ENST00000485746 RGSL1A5PLK6 1076 aa12.46□□□□□ -0.41
PTCD1-205ENST00000485746 FAM149AA5PLN7 773 aa12.46□□□□□ -0.41
PTCD1-205ENST00000485746 ANXA9O76027 345 aa12.46□□□□□ -0.41
PTCD1-205ENST00000485746 CELA2BP08218 269 aaPredicted RBP12.46□□□□□ -0.41
PTCD1-205ENST00000485746 GIMD1P0DJR0 217 aa12.46□□□□□ -0.41
PTCD1-205ENST00000485746 TEAD1P28347 426 aa12.46□□□□□ -0.41
PTCD1-205ENST00000485746 POLD2P49005 469 aa12.46□□□□□ -0.41
PTCD1-205ENST00000485746 ANKRD20A2Q5SQ80 823 aa12.46□□□□□ -0.41
PTCD1-205ENST00000485746 C6orf132Q5T0Z8 1188 aa12.46□□□□□ -0.41
PTCD1-205ENST00000485746 ANKRD20A1Q5TYW2 823 aa12.46□□□□□ -0.41
PTCD1-205ENST00000485746 ANKRD20A3Q5VUR7 823 aa12.46□□□□□ -0.41
PTCD1-205ENST00000485746 ALS2CLQ60I27 953 aa12.46□□□□□ -0.41
PTCD1-205ENST00000485746 LVRNQ6Q4G3 990 aa12.46□□□□□ -0.41
PTCD1-205ENST00000485746 UNQ6494/PRO21346Q6UXR6 183 aa12.46□□□□□ -0.41
PTCD1-205ENST00000485746 ADAMTSL4Q6UY14 1074 aa12.46□□□□□ -0.41
PTCD1-205ENST00000485746 ARHGEF18Q6ZSZ5 1173 aa12.46□□□□□ -0.41
PTCD1-205ENST00000485746 NYAP1Q6ZVC0 841 aa12.46□□□□□ -0.41
PTCD1-205ENST00000485746 MARK2Q7KZI7 788 aaKnown RBP12.46□□□□□ -0.41
PTCD1-205ENST00000485746 EFL1Q7Z2Z2 1120 aaKnown RBP12.46□□□□□ -0.41
PTCD1-205ENST00000485746 NLRP8Q86W28 1048 aa12.46□□□□□ -0.41
PTCD1-205ENST00000485746 RAVER1Q8IY67 606 aaKnown RBP12.46□□□□□ -0.41
PTCD1-205ENST00000485746 FAM46DQ8NEK8 389 aa12.46□□□□□ -0.41
PTCD1-205ENST00000485746 TADA1Q96BN2 335 aa12.46□□□□□ -0.41
PTCD1-205ENST00000485746 HES6Q96HZ4 224 aa12.46□□□□□ -0.41
PTCD1-205ENST00000485746 AGAP2Q99490 1192 aa12.46□□□□□ -0.41
PTCD1-205ENST00000485746 FICDQ9BVA6 458 aa12.46□□□□□ -0.41
PTCD1-205ENST00000485746 TMEM168Q9H0V1 697 aa12.46□□□□□ -0.41
PTCD1-205ENST00000485746 GBA3Q9H227 469 aa12.46□□□□□ -0.41
PTCD1-205ENST00000485746 SYNDIG1Q9H7V2 258 aa12.46□□□□□ -0.41
PTCD1-205ENST00000485746 SUFUQ9UMX1 484 aa12.46□□□□□ -0.41
PTCD1-205ENST00000485746 WASF3Q9UPY6 502 aa12.46□□□□□ -0.41
PTCD1-205ENST00000485746 TMEM98Q9Y2Y6 226 aa12.46□□□□□ -0.41
PTCD1-205ENST00000485746 AAR2Q9Y312 384 aaKnown RBP12.46□□□□□ -0.41
PTCD1-205ENST00000485746 SHROOM3Q8TF72 1996 aa12.46□□□□□ -0.41
PTCD1-205ENST00000485746 C1QTNF9BB2RNN3 333 aa12.45□□□□□ -0.42
PTCD1-205ENST00000485746 DKK1O94907 266 aa12.45□□□□□ -0.42
PTCD1-205ENST00000485746 EPOP01588 193 aa12.45□□□□□ -0.42
PTCD1-205ENST00000485746 C1QTNF9P0C862 333 aa12.45□□□□□ -0.42
PTCD1-205ENST00000485746 HLA-DPA1P20036 260 aa12.45□□□□□ -0.42
PTCD1-205ENST00000485746 CLDN6P56747 220 aa12.45□□□□□ -0.42
PTCD1-205ENST00000485746 CCZ1BP86790 482 aa12.45□□□□□ -0.42
PTCD1-205ENST00000485746 CCZ1P86791 482 aaPredicted RBP12.45□□□□□ -0.42
PTCD1-205ENST00000485746 ILF3Q12906 894 aaKnown RBP eCLIP12.45□□□□□ -0.42
PTCD1-205ENST00000485746 BIRC2Q13490 618 aa12.45□□□□□ -0.42
PTCD1-205ENST00000485746 SMAD1Q15797 465 aaKnown RBP12.45□□□□□ -0.42
PTCD1-205ENST00000485746 SIRPB2Q5JXA9 342 aa12.45□□□□□ -0.42
PTCD1-205ENST00000485746 HES3Q5TGS1 186 aa12.45□□□□□ -0.42
PTCD1-205ENST00000485746 KDELC1Q6UW63 502 aa12.45□□□□□ -0.42
PTCD1-205ENST00000485746 CCNI2Q6ZMN8 369 aaPredicted RBP12.45□□□□□ -0.42
PTCD1-205ENST00000485746 TRIM74Q86UV6 250 aa12.45□□□□□ -0.42
PTCD1-205ENST00000485746 MARCH9Q86YJ5 346 aa12.45□□□□□ -0.42
PTCD1-205ENST00000485746 FAM71DQ8N9W8 422 aa12.45□□□□□ -0.42
PTCD1-205ENST00000485746 CCDC110Q8TBZ0 833 aa12.45□□□□□ -0.42
PTCD1-205ENST00000485746 MAPK15Q8TD08 544 aa12.45□□□□□ -0.42
PTCD1-205ENST00000485746 BLOC1S5Q8TDH9 187 aa12.45□□□□□ -0.42
PTCD1-205ENST00000485746 MRGPRX2Q96LB1 330 aa12.45□□□□□ -0.42
PTCD1-205ENST00000485746 PPP1R2P1Q96PQ5 205 aa12.45□□□□□ -0.42
PTCD1-205ENST00000485746 BOCQ9BWV1 1114 aa12.45□□□□□ -0.42
PTCD1-205ENST00000485746 GSDMCQ9BYG8 508 aa12.45□□□□□ -0.42
PTCD1-205ENST00000485746 FRMD8Q9BZ67 464 aaPredicted RBP12.45□□□□□ -0.42
PTCD1-205ENST00000485746 DPEP2Q9H4A9 486 aa12.45□□□□□ -0.42
PTCD1-205ENST00000485746 BPIFA1Q9NP55 256 aa12.45□□□□□ -0.42
PTCD1-205ENST00000485746 ZNHIT2Q9UHR6 403 aa12.45□□□□□ -0.42
PTCD1-205ENST00000485746 PADI4Q9UM07 663 aa12.45□□□□□ -0.42
PTCD1-205ENST00000485746 PPP2R2CQ9Y2T4 447 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms