RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 TBC1D3DA0A087WVF3 549 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 TBC1D3IA0A087WXS9 549 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 TBC1D3EA0A087X179 549 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 TBC1D3KA0A087X1G2 549 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 TRBV5-4A0A0C4DH59 114 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 CCDC151A5D8V7 595 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 TBC1D3FA6NER0 549 aaPredicted RBP15.78■□□□□ 0.12
APOE-205ENST00000485628 METTL12A8MUP2 240 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 TBC1D3LB9A6J9 549 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 NEMP1O14524 444 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 STX7O15400 261 aaKnown RBP15.78■□□□□ 0.12
APOE-205ENST00000485628 GALR2O43603 387 aaPredicted RBP15.78■□□□□ 0.12
APOE-205ENST00000485628 RPP40O75818 363 aaKnown RBP15.78■□□□□ 0.12
APOE-205ENST00000485628 TM7SF2O76062 418 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 PCDH8O95206 1070 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 POLBP06746 335 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 TBC1D3HP0C7X1 549 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 SP9P0CG40 484 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 BCKDHBP21953 392 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 TEAD1P28347 426 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 TRIM23P36406 574 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 SEPT6Q14141 434 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 BRD3Q15059 726 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 WSCD2Q2TBF2 565 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 SPANXN3Q5MJ09 141 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 KIAA0895LQ68EN5 471 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 TBC1D3GQ6DHY5 549 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 TBC1D3CQ6IPX1 549 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 CES3Q6UWW8 571 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 SLC36A4Q6YBV0 504 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 TRMT10CQ7L0Y3 403 aaKnown RBP15.78■□□□□ 0.12
APOE-205ENST00000485628 TBC1D3Q8IZP1 549 aaPredicted RBP15.78■□□□□ 0.12
APOE-205ENST00000485628 PELI3Q8N2H9 469 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 MREGQ8N565 214 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 PAF1Q8N7H5 531 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 C1orf216Q8TAB5 229 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 HDAC10Q969S8 669 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 SLC17A9Q9BYT1 436 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 DUSP15Q9H1R2 295 aaPredicted RBP15.78■□□□□ 0.12
APOE-205ENST00000485628 BPIFA1Q9NP55 256 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 RAD18Q9NS91 495 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 PKD2L2Q9NZM6 624 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 SAMD15Q9P1V8 674 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 FKBPLQ9UIM3 349 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 COQ6Q9Y2Z9 468 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 PKP3Q9Y446 797 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 MAD1L1Q9Y6D9 718 aa15.78■□□□□ 0.12
APOE-205ENST00000485628 TNRC6BQ9UPQ9 1833 aaKnown RBP15.78■□□□□ 0.12
APOE-205ENST00000485628 RAD51BO15315 384 aa15.77■□□□□ 0.12
APOE-205ENST00000485628 HRO43593 1189 aa15.77■□□□□ 0.12
APOE-205ENST00000485628 H2AFXP16104 143 aaPredicted RBP15.77■□□□□ 0.12
APOE-205ENST00000485628 SSTR1P30872 391 aa15.77■□□□□ 0.12
APOE-205ENST00000485628 FOXN2P32314 431 aa15.77■□□□□ 0.12
APOE-205ENST00000485628 CA5AP35218 305 aa15.77■□□□□ 0.12
APOE-205ENST00000485628 NUDT1P36639 197 aa15.77■□□□□ 0.12
APOE-205ENST00000485628 ANGPT1Q15389 498 aa15.77■□□□□ 0.12
APOE-205ENST00000485628 UAP1Q16222 522 aaPredicted RBP15.77■□□□□ 0.12
APOE-205ENST00000485628 KYNUQ16719 465 aa15.77■□□□□ 0.12
APOE-205ENST00000485628 SPDYCQ5MJ68 293 aa15.77■□□□□ 0.12
APOE-205ENST00000485628 CASC4Q6P4E1 433 aa15.77■□□□□ 0.12
APOE-205ENST00000485628 TRMT10BQ6PF06 316 aaKnown RBP15.77■□□□□ 0.12
APOE-205ENST00000485628 C3orf62Q6ZUJ4 267 aa15.77■□□□□ 0.12
APOE-205ENST00000485628 MICALCLQ6ZW33 695 aa15.77■□□□□ 0.12
APOE-205ENST00000485628 CCDC25Q86WR0 208 aa15.77■□□□□ 0.12
APOE-205ENST00000485628 SLC41A1Q8IVJ1 513 aa15.77■□□□□ 0.12
APOE-205ENST00000485628 CNTN4Q8IWV2 1026 aa15.77■□□□□ 0.12
APOE-205ENST00000485628 TMEM145Q8NBT3 493 aa15.77■□□□□ 0.12
APOE-205ENST00000485628 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.77■□□□□ 0.12
APOE-205ENST00000485628 DENND6BQ8NEG7 585 aa15.77■□□□□ 0.12
APOE-205ENST00000485628 GPR150Q8NGU9 434 aa15.77■□□□□ 0.12
APOE-205ENST00000485628 GAB3Q8WWW8 586 aa15.77■□□□□ 0.12
APOE-205ENST00000485628 SCAMP4Q969E2 229 aa15.77■□□□□ 0.12
APOE-205ENST00000485628 BIRC7Q96CA5 298 aa15.77■□□□□ 0.12
APOE-205ENST00000485628 TTC25Q96NG3 672 aa15.77■□□□□ 0.12
APOE-205ENST00000485628 GPR174Q9BXC1 333 aa15.77■□□□□ 0.12
APOE-205ENST00000485628 C1QTNF1Q9BXJ1 281 aa15.77■□□□□ 0.12
APOE-205ENST00000485628 FAM83DQ9H4H8 585 aa15.77■□□□□ 0.12
APOE-205ENST00000485628 SUDS3Q9H7L9 328 aaPredicted RBP15.77■□□□□ 0.12
APOE-205ENST00000485628 SMOXQ9NWM0 555 aa15.77■□□□□ 0.12
APOE-205ENST00000485628 ZSCAN32Q9NX65 697 aa15.77■□□□□ 0.12
APOE-205ENST00000485628 CNOT6Q9ULM6 557 aaKnown RBP15.77■□□□□ 0.12
APOE-205ENST00000485628 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.77■□□□□ 0.12
APOE-205ENST00000485628 SPAG17Q6Q759 2223 aa15.76■□□□□ 0.11
APOE-205ENST00000485628 CCDC162PA2VCL2 907 aa15.76■□□□□ 0.11
APOE-205ENST00000485628 CCL22O00626 93 aa15.76■□□□□ 0.11
APOE-205ENST00000485628 SPAG6O75602 509 aa15.76■□□□□ 0.11
APOE-205ENST00000485628 PAK4O96013 591 aaPredicted RBP15.76■□□□□ 0.11
APOE-205ENST00000485628 ABHD2P08910 425 aa15.76■□□□□ 0.11
APOE-205ENST00000485628 CNR2P34972 360 aa15.76■□□□□ 0.11
APOE-205ENST00000485628 SPAM1P38567 509 aa15.76■□□□□ 0.11
APOE-205ENST00000485628 PMS2P54278 862 aa15.76■□□□□ 0.11
APOE-205ENST00000485628 ACOX1Q15067 660 aa15.76■□□□□ 0.11
APOE-205ENST00000485628 BEND6Q5SZJ8 279 aaPredicted RBP15.76■□□□□ 0.11
APOE-205ENST00000485628 PDPK2PQ6A1A2 396 aa15.76■□□□□ 0.11
APOE-205ENST00000485628 UNC5BQ8IZJ1 945 aa15.76■□□□□ 0.11
APOE-205ENST00000485628 TRAM1L1Q8N609 369 aa15.76■□□□□ 0.11
APOE-205ENST00000485628 GSDMBQ8TAX9 411 aa15.76■□□□□ 0.11
APOE-205ENST00000485628 SCG3Q8WXD2 468 aaKnown RBP15.76■□□□□ 0.11
APOE-205ENST00000485628 DNASE2BQ8WZ79 361 aa15.76■□□□□ 0.11
APOE-205ENST00000485628 ZNF669Q96BR6 464 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms