RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 TRIM23P36406 574 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 ETV5P41161 510 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 ETV3P41162 512 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 MAPK10P53779 464 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 CDH6P55285 790 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 KIAA1024LP59773 190 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 ITKQ08881 620 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 PIGHQ14442 188 aaPredicted RBP10.57□□□□□ -0.72
HMGN1-215ENST00000485550 KRT81Q14533 505 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 CNGA3Q16281 694 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 ATP13A4Q4VNC1 1196 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 MARC1Q5VT66 337 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 CLEC18BQ6UXF7 455 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 HSD11B1LQ7Z5J1 315 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 TSPAN33Q86UF1 283 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 CPNE8Q86YQ8 564 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 ATPAF2Q8N5M1 289 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 CLEC18CQ8NCF0 446 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 GPR156Q8NFN8 814 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 ZNF564Q8TBZ8 553 aaPredicted RBP10.57□□□□□ -0.72
HMGN1-215ENST00000485550 LRRN4Q8WUT4 740 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 NSMCE1Q8WV22 266 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 JPH3Q8WXH2 748 aaPredicted RBP10.57□□□□□ -0.72
HMGN1-215ENST00000485550 NUS1Q96E22 293 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 COQ10AQ96MF6 247 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 ZNF599Q96NL3 588 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 PSMG3-AS1Q96PY0 264 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 SMIM14Q96QK8 99 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 NUDCD1Q96RS6 583 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 NUP85Q9BW27 656 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 LRRN3Q9H3W5 708 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 CARS2Q9HA77 564 aaKnown RBP10.57□□□□□ -0.72
HMGN1-215ENST00000485550 NT5MQ9NPB1 228 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 GOLGA6AQ9NYA3 693 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 FOXJ2Q9P0K8 574 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 ANAPC7Q9UJX3 599 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 LOXL2Q9Y4K0 774 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 ESPL1Q14674 2120 aa10.57□□□□□ -0.72
HMGN1-215ENST00000485550 ITPR2Q14571 2701 aa10.56□□□□□ -0.72
HMGN1-215ENST00000485550 A0A087X0T9 212 aa10.56□□□□□ -0.72
HMGN1-215ENST00000485550 PRSS38A1L453 326 aa10.56□□□□□ -0.72
HMGN1-215ENST00000485550 NVLO15381 856 aaKnown RBP10.56□□□□□ -0.72
HMGN1-215ENST00000485550 HTRA2O43464 458 aaPredicted RBP10.56□□□□□ -0.72
HMGN1-215ENST00000485550 HEXIM1O94992 359 aaKnown RBP10.56□□□□□ -0.72
HMGN1-215ENST00000485550 MAP3K6O95382 1288 aa10.56□□□□□ -0.72
HMGN1-215ENST00000485550 FUCA1P04066 466 aa10.56□□□□□ -0.72
HMGN1-215ENST00000485550 FAM228BP0C875 321 aa10.56□□□□□ -0.72
HMGN1-215ENST00000485550 LHCGRP22888 699 aa10.56□□□□□ -0.72
HMGN1-215ENST00000485550 MMP13P45452 471 aa10.56□□□□□ -0.72
HMGN1-215ENST00000485550 POLD2P49005 469 aa10.56□□□□□ -0.72
HMGN1-215ENST00000485550 UBASH3AP57075 661 aa10.56□□□□□ -0.72
HMGN1-215ENST00000485550 SLC25A11Q02978 314 aaKnown RBP10.56□□□□□ -0.72
HMGN1-215ENST00000485550 ARHGEF7Q14155 803 aa10.56□□□□□ -0.72
HMGN1-215ENST00000485550 FIGNQ5HY92 759 aa10.56□□□□□ -0.72
HMGN1-215ENST00000485550 CCDC122Q5T0U0 273 aa10.56□□□□□ -0.72
HMGN1-215ENST00000485550 OGFOD3Q6PK18 319 aa10.56□□□□□ -0.72
HMGN1-215ENST00000485550 RFLNAQ6ZTI6 216 aa10.56□□□□□ -0.72
HMGN1-215ENST00000485550 Q6ZVL8 140 aa10.56□□□□□ -0.72
HMGN1-215ENST00000485550 CCNJLQ8IV13 435 aa10.56□□□□□ -0.72
HMGN1-215ENST00000485550 BBS5Q8N3I7 341 aa10.56□□□□□ -0.72
HMGN1-215ENST00000485550 FAM26EQ8N5C1 309 aa10.56□□□□□ -0.72
HMGN1-215ENST00000485550 USP7Q93009 1102 aa10.56□□□□□ -0.72
HMGN1-215ENST00000485550 SPATS2LQ9NUQ6 558 aaKnown RBP10.56□□□□□ -0.72
HMGN1-215ENST00000485550 LRIT1Q9P2V4 623 aa10.56□□□□□ -0.72
HMGN1-215ENST00000485550 IP6K2Q9UHH9 426 aa10.56□□□□□ -0.72
HMGN1-215ENST00000485550 CD84Q9UIB8 345 aa10.56□□□□□ -0.72
HMGN1-215ENST00000485550 PHTF1Q9UMS5 762 aa10.56□□□□□ -0.72
HMGN1-215ENST00000485550 BZW2Q9Y6E2 419 aaKnown RBP10.56□□□□□ -0.72
HMGN1-215ENST00000485550 RNF215Q9Y6U7 377 aa10.56□□□□□ -0.72
HMGN1-215ENST00000485550 NPIPB15A6NHN6 443 aaPredicted RBP10.55□□□□□ -0.72
HMGN1-215ENST00000485550 TMX2-CTNND1H3BSU7 103 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 MYO1FO00160 1098 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 PDE2AO00408 941 aaPredicted RBP10.55□□□□□ -0.72
HMGN1-215ENST00000485550 TNFRSF10CO14798 259 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 SOCS5O75159 536 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 PGLSO95336 258 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 SERPING1P05155 500 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 CYP1A2P05177 515 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 CEACAM5P06731 702 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 PDHA1P08559 390 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 HOXC4P09017 264 aaPredicted RBP10.55□□□□□ -0.72
HMGN1-215ENST00000485550 CYP2A6P11509 494 aaPredicted RBP10.55□□□□□ -0.72
HMGN1-215ENST00000485550 GLB1P16278 677 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 IL4RP24394 825 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 AK4P27144 223 aaPredicted RBP10.55□□□□□ -0.72
HMGN1-215ENST00000485550 CCKBRP32239 447 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 SERPINB6P35237 376 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 HSPA9P38646 679 aaKnown RBP10.55□□□□□ -0.72
HMGN1-215ENST00000485550 PBX1P40424 430 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 GNPDA1P46926 289 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 MAZP56270 477 aaKnown RBP10.55□□□□□ -0.72
HMGN1-215ENST00000485550 TPM4P67936 248 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 KCNAB2Q13303 367 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 HLTFQ14527 1009 aaKnown RBP eCLIP10.55□□□□□ -0.72
HMGN1-215ENST00000485550 AMZ1Q400G9 498 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 C14orf28Q4W4Y0 310 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 FAM182AQ5T1J6 154 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 ARMC12Q5T9G4 340 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 SPECC1LQ69YQ0 1117 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 RAET1GQ6H3X3 334 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms