RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 SHISA5Q8N114 240 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 RYBPQ8N488 228 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-207ENST00000483407 OR7D4Q8NG98 312 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 SNRNP27Q8WVK2 155 aaKnown RBP5.95□□□□□ -1.46
CSDE1-207ENST00000483407 ASB12Q8WXK4 309 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 NT5C3BQ969T7 300 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 ISG20Q96AZ6 181 aaKnown RBP5.95□□□□□ -1.46
CSDE1-207ENST00000483407 C18orf8Q96DM3 657 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 ATXN7L3BQ96GX2 97 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 SLC46A1Q96NT5 459 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 HAPLN3Q96S86 360 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 TBCBQ99426 244 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 MCMBPQ9BTE3 642 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 C1QTNF7Q9BXJ2 289 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 OSBPL1AQ9BXW6 950 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 TM6SF2Q9BZW4 377 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 ZYG11BQ9C0D3 744 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 ZDHHC6Q9H6R6 413 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 ASCL3Q9NQ33 180 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 ANLNQ9NQW6 1124 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 GPR27Q9NS67 375 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 HECAQ9UBI9 543 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-207ENST00000483407 APOBEC3BQ9UH17 382 aaKnown RBP5.95□□□□□ -1.46
CSDE1-207ENST00000483407 RWDD2AQ9UIY3 292 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 DNAJC12Q9UKB3 198 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 HPCAL4Q9UM19 191 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 ENTPD2Q9Y5L3 495 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 SNX10Q9Y5X0 201 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 U3KQA8 63 aa5.95□□□□□ -1.46
CSDE1-207ENST00000483407 BLACEA4D250 179 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 IGLON5A6NGN9 336 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 C16orf96A6NNT2 1141 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 B8ZZF3 427 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 K7ENP7 123 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 RNF103O00237 685 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 FOXN3O00409 490 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-207ENST00000483407 TOR1BO14657 336 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 AURKAO14965 403 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 MUSKO15146 869 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 ZNF821O75541 412 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-207ENST00000483407 ZMPSTE24O75844 475 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 TM7SF2O76062 418 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 TNFSF15O95150 251 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 POP4O95707 220 aaKnown RBP5.94□□□□□ -1.46
CSDE1-207ENST00000483407 FURINP09958 794 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 POU3F2P20265 443 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-207ENST00000483407 SOX5P35711 763 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 MTIF2P46199 727 aaKnown RBP5.94□□□□□ -1.46
CSDE1-207ENST00000483407 GABRB2P47870 512 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 MAPKAPK2P49137 400 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 BLKP51451 505 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 PFN3P60673 137 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 YPEL5P62699 121 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 ARF5P84085 180 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 APBA1Q02410 837 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 GNA12Q03113 381 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 RAD51Q06609 339 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 EIF2B5Q13144 721 aaKnown RBP5.94□□□□□ -1.46
CSDE1-207ENST00000483407 EIF3IQ13347 325 aaKnown RBP5.94□□□□□ -1.46
CSDE1-207ENST00000483407 RAPGEF1Q13905 1077 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 SPIDRQ14159 915 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 LY6DQ14210 128 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 BECN1Q14457 450 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 TESK1Q15569 626 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 TPD52L1Q16890 204 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-207ENST00000483407 PRSS53Q2L4Q9 553 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 ARL13BQ3SXY8 428 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 ZNF805Q5CZA5 627 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 FAXCQ5TGI0 409 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 DENND5AQ6IQ26 1287 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 RWDD4Q6NW29 188 aaKnown RBP5.94□□□□□ -1.46
CSDE1-207ENST00000483407 INO80CQ6PI98 192 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-207ENST00000483407 CRTC1Q6UUV9 634 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 MAMDC2Q7Z304 686 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-207ENST00000483407 FAM131BQ86XD5 332 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 FAM114A1Q8IWE2 563 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 DRC7Q8IY82 874 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 WDR36Q8NI36 951 aaKnown RBP5.94□□□□□ -1.46
CSDE1-207ENST00000483407 TP53INP1Q96A56 240 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 TBATAQ96M53 351 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 KLF6Q99612 283 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-207ENST00000483407 SLC13A1Q9BZW2 595 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 RETREG1Q9H6L5 497 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 SYNDIG1Q9H7V2 258 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 PLCB1Q9NQ66 1216 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 DDX56Q9NY93 547 aaKnown RBP5.94□□□□□ -1.46
CSDE1-207ENST00000483407 PPARGC1AQ9UBK2 798 aaKnown RBP5.94□□□□□ -1.46
CSDE1-207ENST00000483407 NDOR1Q9UHB4 597 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 ATP8A1Q9Y2Q0 1164 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 ST14Q9Y5Y6 855 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 PTPRQQ9UMZ3 2332 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 ZNF462Q96JM2 2506 aa5.94□□□□□ -1.46
CSDE1-207ENST00000483407 CCDC187A0A096LP49 1063 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 ZSCAN5CA6NGD5 496 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-207ENST00000483407 CDRT15L2A8MXV6 281 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 LMO7DNF2Z398 122 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 GOLGA8SH3BPF8 625 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 TMX2-CTNND1H3BSU7 103 aa5.93□□□□□ -1.46
CSDE1-207ENST00000483407 I6L893 689 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-207ENST00000483407 KRIT1O00522 736 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms