RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 PAK1IP1Q9NWT1 392 aaPredicted RBP11.8□□□□□ -0.52
VTI1A-205ENST00000483122 PDE10AQ9Y233 779 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 NDUFAF1Q9Y375 327 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 RIPK3Q9Y572 518 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 PTGDR2Q9Y5Y4 395 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 C16orf96A6NNT2 1141 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 A8MT66 165 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 BBIP1A8MTZ0 92 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 PTGES3LE9PB15 166 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 UPK1AO00322 258 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 ANGPT2O15123 496 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 GABARAPO95166 117 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 DLGAP3O95886 979 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 STMN1P16949 149 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 FSHRP23945 695 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 PTPN3P26045 913 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 SEPHS1P49903 392 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 SOWAHAQ2M3V2 549 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 TAF2Q6P1X5 1199 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 LYSMD2Q8IV50 215 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 LEMD2Q8NC56 503 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 MTMR14Q8NCE2 650 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 TMEM125Q96AQ2 219 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 BIRC7Q96CA5 298 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 ELMO2Q96JJ3 720 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 RNF145Q96MT1 663 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 DACH2Q96NX9 599 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 MRPL57Q9BQC6 102 aaKnown RBP11.79□□□□□ -0.52
VTI1A-205ENST00000483122 CCDC90BQ9GZT6 254 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 MIR1-1HGQ9H1L0 117 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 C2orf40Q9H1Z8 148 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 TOR3AQ9H497 397 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 AKTIPQ9H8T0 292 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 SPC25Q9HBM1 224 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 EXD2Q9NVH0 621 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 MAP3K20Q9NYL2 800 aaKnown RBP11.79□□□□□ -0.52
VTI1A-205ENST00000483122 UBP1Q9NZI7 540 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 TESMINQ9Y4I5 508 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 ZNF99A8MXY4 864 aaPredicted RBP11.79□□□□□ -0.52
VTI1A-205ENST00000483122 M0QX08 132 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 ZBTB24O43167 697 aaPredicted RBP11.79□□□□□ -0.52
VTI1A-205ENST00000483122 B4GALT5O43286 388 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 HUS1O60921 280 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 ITIH1P19827 911 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 CES1P23141 567 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 EIF2DP41214 584 aaKnown RBP11.79□□□□□ -0.52
VTI1A-205ENST00000483122 ATP4BP51164 291 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 ALDH3A2P51648 485 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 TPD52P55327 224 aaPredicted RBP11.79□□□□□ -0.52
VTI1A-205ENST00000483122 TAS2R39P59534 338 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 DAG1Q14118 895 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 CSHL1Q14406 222 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 FUT11Q495W5 492 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 CCDC58Q4VC31 144 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 ANKRD34AQ69YU3 496 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 TTC23LQ6PF05 361 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 RFPL4BQ6ZWI9 263 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 STK32CQ86UX6 486 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 SIX5Q8N196 739 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 CLEC4FQ8N1N0 589 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 ZNF280CQ8ND82 737 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 CENPIQ92674 756 aaPredicted RBP11.79□□□□□ -0.52
VTI1A-205ENST00000483122 TMBIM1Q969X1 311 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 UBXN10Q96LJ8 280 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 CDK5RAP1Q96SZ6 601 aaKnown RBP11.79□□□□□ -0.52
VTI1A-205ENST00000483122 LPIN3Q9BQK8 851 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 ALG2Q9H553 416 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 MYOZ2Q9NPC6 264 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 MAFBQ9Y5Q3 323 aaPredicted RBP11.79□□□□□ -0.52
VTI1A-205ENST00000483122 SNX5Q9Y5X3 404 aa11.79□□□□□ -0.52
VTI1A-205ENST00000483122 LACTBL1A8MY62 500 aa11.78□□□□□ -0.52
VTI1A-205ENST00000483122 AP3B1O00203 1094 aa11.78□□□□□ -0.52
VTI1A-205ENST00000483122 TNPO2O14787 897 aaKnown RBP11.78□□□□□ -0.52
VTI1A-205ENST00000483122 KMOO15229 486 aa11.78□□□□□ -0.52
VTI1A-205ENST00000483122 IDH3BO43837 385 aa11.78□□□□□ -0.52
VTI1A-205ENST00000483122 SEC24AO95486 1093 aa11.78□□□□□ -0.52
VTI1A-205ENST00000483122 ALPLP05186 524 aa11.78□□□□□ -0.52
VTI1A-205ENST00000483122 POLR2EP19388 210 aaKnown RBP11.78□□□□□ -0.52
VTI1A-205ENST00000483122 ENDOUP21128 410 aaKnown RBP11.78□□□□□ -0.52
VTI1A-205ENST00000483122 TGFBR1P36897 503 aa11.78□□□□□ -0.52
VTI1A-205ENST00000483122 PPP5CP53041 499 aa11.78□□□□□ -0.52
VTI1A-205ENST00000483122 RACK1P63244 317 aaKnown RBP11.78□□□□□ -0.52
VTI1A-205ENST00000483122 LIPEQ05469 1076 aa11.78□□□□□ -0.52
VTI1A-205ENST00000483122 KCTD11Q693B1 232 aa11.78□□□□□ -0.52
VTI1A-205ENST00000483122 JADE1Q6IE81 842 aa11.78□□□□□ -0.52
VTI1A-205ENST00000483122 TMC5Q6UXY8 1006 aa11.78□□□□□ -0.52
VTI1A-205ENST00000483122 LINC00299Q6ZSB3 139 aa11.78□□□□□ -0.52
VTI1A-205ENST00000483122 STRADAQ7RTN6 431 aa11.78□□□□□ -0.52
VTI1A-205ENST00000483122 PAGE2Q7Z2X7 111 aa11.78□□□□□ -0.52
VTI1A-205ENST00000483122 DCP2Q8IU60 420 aaKnown RBP11.78□□□□□ -0.52
VTI1A-205ENST00000483122 POC5Q8NA72 575 aa11.78□□□□□ -0.52
VTI1A-205ENST00000483122 OR13J1Q8NGT2 312 aa11.78□□□□□ -0.52
VTI1A-205ENST00000483122 RHOXF1Q8NHV9 184 aa11.78□□□□□ -0.52
VTI1A-205ENST00000483122 DYNC2LI1Q8TCX1 351 aa11.78□□□□□ -0.52
VTI1A-205ENST00000483122 OSCP1Q8WVF1 389 aa11.78□□□□□ -0.52
VTI1A-205ENST00000483122 FAR1Q8WVX9 515 aa11.78□□□□□ -0.52
VTI1A-205ENST00000483122 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.78□□□□□ -0.52
VTI1A-205ENST00000483122 TMEM74Q96NL1 305 aa11.78□□□□□ -0.52
VTI1A-205ENST00000483122 YME1L1Q96TA2 773 aa11.78□□□□□ -0.52
VTI1A-205ENST00000483122 KCTD14Q9BQ13 255 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms