RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 TIPARPQ7Z3E1 657 aaKnown RBP7.36□□□□□ -1.23
CSDE1-206ENST00000483030 KDELC2Q7Z4H8 507 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 ARHGAP12Q8IWW6 846 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 TP53INP2Q8IXH6 220 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 NLGN4XQ8N0W4 816 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 CBARPQ8N350 705 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-206ENST00000483030 FAM26EQ8N5C1 309 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 BMPERQ8N8U9 685 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 NLGN4YQ8NFZ3 816 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-206ENST00000483030 APOBEC4Q8WW27 367 aaKnown RBP7.36□□□□□ -1.23
CSDE1-206ENST00000483030 KIAA1143Q96AT1 154 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-206ENST00000483030 RTP4Q96DX8 246 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 AHCYL2Q96HN2 611 aaKnown RBP7.36□□□□□ -1.23
CSDE1-206ENST00000483030 HS3ST6Q96QI5 342 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 SLC38A3Q99624 504 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 DPYSL5Q9BPU6 564 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 DHX35Q9H5Z1 703 aaKnown RBP7.36□□□□□ -1.23
CSDE1-206ENST00000483030 SP110Q9HB58 689 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 KCTD5Q9NXV2 234 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 PDP2Q9P2J9 529 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 AP4E1Q9UPM8 1137 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 SLC17A4Q9Y2C5 497 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 TMEM98Q9Y2Y6 226 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 FLNCQ14315 2725 aa7.36□□□□□ -1.23
CSDE1-206ENST00000483030 A0A0U1RQS6 177 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.35□□□□□ -1.23
CSDE1-206ENST00000483030 BLACEA4D250 179 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 MTSS1O43312 755 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 HTRA2O43464 458 aaPredicted RBP7.35□□□□□ -1.23
CSDE1-206ENST00000483030 CPP00450 1065 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 CYP2A6P11509 494 aaPredicted RBP7.35□□□□□ -1.23
CSDE1-206ENST00000483030 ERCC2P18074 760 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 LHCGRP22888 699 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 EEF1GP26641 437 aaKnown RBP7.35□□□□□ -1.23
CSDE1-206ENST00000483030 OAS2P29728 719 aaKnown RBP7.35□□□□□ -1.23
CSDE1-206ENST00000483030 GPR1P46091 355 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 UBE2HP62256 183 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 GPLD1P80108 840 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 MC2RQ01718 297 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 IL10RBQ08334 325 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 SLC10A7Q0GE19 358 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 CDC20Q12834 499 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 LBRQ14739 615 aaKnown RBP7.35□□□□□ -1.23
CSDE1-206ENST00000483030 SYCP1Q15431 976 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 LACTB2Q53H82 288 aaPredicted RBP7.35□□□□□ -1.23
CSDE1-206ENST00000483030 PPP6R3Q5H9R7 873 aaPredicted RBP7.35□□□□□ -1.23
CSDE1-206ENST00000483030 ERMARDQ5T6L9 678 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 ATP1A1-AS1Q5TC04 95 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 HIST2H2BCQ6DN03 193 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 RAET1GQ6H3X3 334 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 C16orf46Q6P387 395 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 RFX8Q6ZV50 586 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 MARK2Q7KZI7 788 aaKnown RBP7.35□□□□□ -1.23
CSDE1-206ENST00000483030 ARHGAP22Q7Z5H3 698 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 TSPAN33Q86UF1 283 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 CNPY4Q8N129 248 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 ARFGAP1Q8N6T3 406 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 NPWQ8N729 165 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 OR10G6Q8NH81 332 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 SLC37A2Q8TED4 501 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 FNIP1Q8TF40 1166 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 NCSTNQ92542 709 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 DTD2Q96FN9 168 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 SCARF2Q96GP6 870 aaPredicted RBP7.35□□□□□ -1.23
CSDE1-206ENST00000483030 TEFMQ96QE5 360 aaKnown RBP7.35□□□□□ -1.23
CSDE1-206ENST00000483030 PSKH2Q96QS6 385 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 OR2M4Q96R27 311 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 AGPAT1Q99943 283 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 EFHD1Q9BUP0 239 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 NOD2Q9HC29 1040 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 LRRC4CQ9HCJ2 640 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 APMAPQ9HDC9 416 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 PCSK1NQ9UHG2 260 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 DACH1Q9UI36 760 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 CD84Q9UIB8 345 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 PHTF1Q9UMS5 762 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 LRRK2Q5S007 2527 aa7.35□□□□□ -1.23
CSDE1-206ENST00000483030 NBASA2RRP1 2371 aa7.34□□□□□ -1.23
CSDE1-206ENST00000483030 CHD5Q8TDI0 1954 aa7.34□□□□□ -1.23
CSDE1-206ENST00000483030 SCN8AQ9UQD0 1980 aa7.34□□□□□ -1.23
CSDE1-206ENST00000483030 A0A1W2PQ67 120 aa7.34□□□□□ -1.23
CSDE1-206ENST00000483030 NPIPB15A6NHN6 443 aaPredicted RBP7.34□□□□□ -1.23
CSDE1-206ENST00000483030 PRR19A6NJB7 356 aa7.34□□□□□ -1.23
CSDE1-206ENST00000483030 K7EM74 188 aa7.34□□□□□ -1.23
CSDE1-206ENST00000483030 STK17BO94768 372 aa7.34□□□□□ -1.23
CSDE1-206ENST00000483030 MAP3K6O95382 1288 aa7.34□□□□□ -1.23
CSDE1-206ENST00000483030 EML2O95834 649 aa7.34□□□□□ -1.23
CSDE1-206ENST00000483030 PTMAP06454 111 aaKnown RBP7.34□□□□□ -1.23
CSDE1-206ENST00000483030 DESP17661 470 aa7.34□□□□□ -1.23
CSDE1-206ENST00000483030 CTPS1P17812 591 aa7.34□□□□□ -1.23
CSDE1-206ENST00000483030 TCN2P20062 427 aa7.34□□□□□ -1.23
CSDE1-206ENST00000483030 NR1D1P20393 614 aa7.34□□□□□ -1.23
CSDE1-206ENST00000483030 TNFAIP3P21580 790 aa7.34□□□□□ -1.23
CSDE1-206ENST00000483030 PSMA2P25787 234 aa7.34□□□□□ -1.23
CSDE1-206ENST00000483030 NFKBIAP25963 317 aa7.34□□□□□ -1.23
CSDE1-206ENST00000483030 TEAD1P28347 426 aa7.34□□□□□ -1.23
CSDE1-206ENST00000483030 MAN1A1P33908 653 aa7.34□□□□□ -1.23
CSDE1-206ENST00000483030 NOP2P46087 812 aaKnown RBP7.34□□□□□ -1.23
CSDE1-206ENST00000483030 FASLGP48023 281 aa7.34□□□□□ -1.23
CSDE1-206ENST00000483030 MLLT10P55197 1068 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms