RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 ADAMTSL4Q6UY14 1074 aa13.84□□□□□ -0.19
VARS-225ENST00000482996 NYAP1Q6ZVC0 841 aa13.84□□□□□ -0.19
VARS-225ENST00000482996 BBS12Q6ZW61 710 aa13.84□□□□□ -0.19
VARS-225ENST00000482996 B4GALNT4Q76KP1 1039 aa13.84□□□□□ -0.19
VARS-225ENST00000482996 ZC3H18Q86VM9 953 aaKnown RBP13.84□□□□□ -0.19
VARS-225ENST00000482996 OR6C4Q8NGE1 309 aa13.84□□□□□ -0.19
VARS-225ENST00000482996 WDR48Q8TAF3 677 aa13.84□□□□□ -0.19
VARS-225ENST00000482996 HAUS1Q96CS2 278 aa13.84□□□□□ -0.19
VARS-225ENST00000482996 TEKT5Q96M29 485 aa13.84□□□□□ -0.19
VARS-225ENST00000482996 DEPDC7Q96QD5 511 aa13.84□□□□□ -0.19
VARS-225ENST00000482996 FERMT1Q9BQL6 677 aa13.84□□□□□ -0.19
VARS-225ENST00000482996 HEMGNQ9BXL5 484 aa13.84□□□□□ -0.19
VARS-225ENST00000482996 FRMD8Q9BZ67 464 aaPredicted RBP13.84□□□□□ -0.19
VARS-225ENST00000482996 NRSN2Q9GZP1 204 aa13.84□□□□□ -0.19
VARS-225ENST00000482996 LACRTQ9GZZ8 138 aa13.84□□□□□ -0.19
VARS-225ENST00000482996 TMEM168Q9H0V1 697 aa13.84□□□□□ -0.19
VARS-225ENST00000482996 PKD2L2Q9NZM6 624 aa13.84□□□□□ -0.19
VARS-225ENST00000482996 PCDHA3Q9Y5H8 950 aa13.84□□□□□ -0.19
VARS-225ENST00000482996 DUSP10Q9Y6W6 482 aa13.84□□□□□ -0.19
VARS-225ENST00000482996 DSPP15924 2871 aaKnown RBP13.84□□□□□ -0.19
VARS-225ENST00000482996 RGSL1A5PLK6 1076 aa13.83□□□□□ -0.2
VARS-225ENST00000482996 SRRM3A6NNA2 597 aaPredicted RBP13.83□□□□□ -0.2
VARS-225ENST00000482996 APOC4-APOC2K7ER74 178 aa13.83□□□□□ -0.2
VARS-225ENST00000482996 APOC2P02655 101 aa13.83□□□□□ -0.2
VARS-225ENST00000482996 CEACAM5P06731 702 aa13.83□□□□□ -0.2
VARS-225ENST00000482996 CTNNA2P26232 953 aa13.83□□□□□ -0.2
VARS-225ENST00000482996 RWDD2BP57060 319 aa13.83□□□□□ -0.2
VARS-225ENST00000482996 CDK18Q07002 472 aa13.83□□□□□ -0.2
VARS-225ENST00000482996 ADCY2Q08462 1091 aa13.83□□□□□ -0.2
VARS-225ENST00000482996 KIF5AQ12840 1032 aa13.83□□□□□ -0.2
VARS-225ENST00000482996 ILF3Q12906 894 aaKnown RBP eCLIP13.83□□□□□ -0.2
VARS-225ENST00000482996 GALNT3Q14435 633 aa13.83□□□□□ -0.2
VARS-225ENST00000482996 PCSK7Q16549 785 aa13.83□□□□□ -0.2
VARS-225ENST00000482996 CDCP2Q5VXM1 449 aa13.83□□□□□ -0.2
VARS-225ENST00000482996 KCTD16Q68DU8 428 aa13.83□□□□□ -0.2
VARS-225ENST00000482996 RFLNAQ6ZTI6 216 aa13.83□□□□□ -0.2
VARS-225ENST00000482996 KDELC2Q7Z4H8 507 aa13.83□□□□□ -0.2
VARS-225ENST00000482996 KYQ8NBH2 561 aa13.83□□□□□ -0.2
VARS-225ENST00000482996 FAM46DQ8NEK8 389 aa13.83□□□□□ -0.2
VARS-225ENST00000482996 SCAMP4Q969E2 229 aa13.83□□□□□ -0.2
VARS-225ENST00000482996 QKIQ96PU8 341 aaKnown RBP eCLIP13.83□□□□□ -0.2
VARS-225ENST00000482996 SRPK1Q96SB4 655 aaKnown RBP13.83□□□□□ -0.2
VARS-225ENST00000482996 VAT1Q99536 393 aa13.83□□□□□ -0.2
VARS-225ENST00000482996 RIOK2Q9BVS4 552 aaKnown RBP13.83□□□□□ -0.2
VARS-225ENST00000482996 GSDMCQ9BYG8 508 aa13.83□□□□□ -0.2
VARS-225ENST00000482996 SUDS3Q9H7L9 328 aaPredicted RBP13.83□□□□□ -0.2
VARS-225ENST00000482996 KLHL8Q9P2G9 620 aaPredicted RBP13.83□□□□□ -0.2
VARS-225ENST00000482996 EFR3BQ9Y2G0 817 aa13.83□□□□□ -0.2
VARS-225ENST00000482996 AK5Q9Y6K8 562 aa13.83□□□□□ -0.2
VARS-225ENST00000482996 CHD6Q8TD26 2715 aa13.83□□□□□ -0.2
VARS-225ENST00000482996 URB1O60287 2271 aaKnown RBP13.82□□□□□ -0.2
VARS-225ENST00000482996 MACROD2A1Z1Q3 448 aa13.82□□□□□ -0.2
VARS-225ENST00000482996 H7C0C1 242 aa13.82□□□□□ -0.2
VARS-225ENST00000482996 PMPCBO75439 489 aa13.82□□□□□ -0.2
VARS-225ENST00000482996 KRT37O76014 449 aa13.82□□□□□ -0.2
VARS-225ENST00000482996 NDST3O95803 873 aa13.82□□□□□ -0.2
VARS-225ENST00000482996 IVLP07476 585 aa13.82□□□□□ -0.2
VARS-225ENST00000482996 GNPDA1P46926 289 aa13.82□□□□□ -0.2
VARS-225ENST00000482996 ATP5OP48047 213 aa13.82□□□□□ -0.2
VARS-225ENST00000482996 SPINT3P49223 89 aa13.82□□□□□ -0.2
VARS-225ENST00000482996 WASHC5Q12768 1159 aa13.82□□□□□ -0.2
VARS-225ENST00000482996 XRCC4Q13426 336 aa13.82□□□□□ -0.2
VARS-225ENST00000482996 PEX6Q13608 980 aa13.82□□□□□ -0.2
VARS-225ENST00000482996 PERM1Q5SV97 790 aa13.82□□□□□ -0.2
VARS-225ENST00000482996 DOK6Q6PKX4 331 aa13.82□□□□□ -0.2
VARS-225ENST00000482996 TMEM139Q8IV31 216 aa13.82□□□□□ -0.2
VARS-225ENST00000482996 SYCE1Q8N0S2 351 aa13.82□□□□□ -0.2
VARS-225ENST00000482996 SPATA22Q8NHS9 363 aa13.82□□□□□ -0.2
VARS-225ENST00000482996 HTR3CQ8WXA8 447 aa13.82□□□□□ -0.2
VARS-225ENST00000482996 TADA1Q96BN2 335 aa13.82□□□□□ -0.2
VARS-225ENST00000482996 HIC2Q96JB3 615 aa13.82□□□□□ -0.2
VARS-225ENST00000482996 TRIB3Q96RU7 358 aa13.82□□□□□ -0.2
VARS-225ENST00000482996 CCDC3Q9BQI4 270 aa13.82□□□□□ -0.2
VARS-225ENST00000482996 OSBPL8Q9BZF1 889 aa13.82□□□□□ -0.2
VARS-225ENST00000482996 FAM83DQ9H4H8 585 aa13.82□□□□□ -0.2
VARS-225ENST00000482996 ZFYVE1Q9HBF4 777 aa13.82□□□□□ -0.2
VARS-225ENST00000482996 RAD18Q9NS91 495 aa13.82□□□□□ -0.2
VARS-225ENST00000482996 TRNAU1APQ9NX07 287 aaKnown RBP13.82□□□□□ -0.2
VARS-225ENST00000482996 FAM153AQ9UHL3 310 aa13.82□□□□□ -0.2
VARS-225ENST00000482996 AMFRQ9UKV5 643 aa13.82□□□□□ -0.2
VARS-225ENST00000482996 SUFUQ9UMX1 484 aa13.82□□□□□ -0.2
VARS-225ENST00000482996 SLC17A4Q9Y2C5 497 aa13.82□□□□□ -0.2
VARS-225ENST00000482996 RP1P56715 2156 aa13.82□□□□□ -0.2
VARS-225ENST00000482996 LRP4O75096 1905 aa13.82□□□□□ -0.2
VARS-225ENST00000482996 GRID2IPA4D2P6 1211 aa13.81□□□□□ -0.2
VARS-225ENST00000482996 B4DGG1 531 aa13.81□□□□□ -0.2
VARS-225ENST00000482996 TAF4O00268 1085 aa13.81□□□□□ -0.2
VARS-225ENST00000482996 CSO75390 466 aaKnown RBP13.81□□□□□ -0.2
VARS-225ENST00000482996 TCEA3O75764 348 aa13.81□□□□□ -0.2
VARS-225ENST00000482996 MT-CYBP00156 380 aaPredicted RBP13.81□□□□□ -0.2
VARS-225ENST00000482996 SOD1P00441 154 aa13.81□□□□□ -0.2
VARS-225ENST00000482996 NFKB1P19838 968 aa13.81□□□□□ -0.2
VARS-225ENST00000482996 PTPN7P35236 360 aa13.81□□□□□ -0.2
VARS-225ENST00000482996 GSDMDP57764 484 aa13.81□□□□□ -0.2
VARS-225ENST00000482996 RTP5Q14D33 572 aa13.81□□□□□ -0.2
VARS-225ENST00000482996 FAM182AQ5T1J6 154 aa13.81□□□□□ -0.2
VARS-225ENST00000482996 OGFOD3Q6PK18 319 aa13.81□□□□□ -0.2
VARS-225ENST00000482996 RBM44Q6ZP01 1051 aaKnown RBP13.81□□□□□ -0.2
VARS-225ENST00000482996 PID1Q7Z2X4 250 aa13.81□□□□□ -0.2
VARS-225ENST00000482996 LYSMD3Q7Z3D4 306 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms