RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 SUDS3Q9H7L9 328 aaPredicted RBP13.41□□□□□ -0.26
CTDSP1-208ENST00000482272 ZNHIT6Q9NWK9 470 aaKnown RBP13.41□□□□□ -0.26
CTDSP1-208ENST00000482272 CD84Q9UIB8 345 aa13.41□□□□□ -0.26
CTDSP1-208ENST00000482272 DNPEPQ9ULA0 475 aa13.41□□□□□ -0.26
CTDSP1-208ENST00000482272 ATXN7L1Q9ULK2 861 aaPredicted RBP13.41□□□□□ -0.26
CTDSP1-208ENST00000482272 SUFUQ9UMX1 484 aa13.41□□□□□ -0.26
CTDSP1-208ENST00000482272 SLC17A4Q9Y2C5 497 aa13.41□□□□□ -0.26
CTDSP1-208ENST00000482272 SSUH2Q9Y2M2 353 aa13.41□□□□□ -0.26
CTDSP1-208ENST00000482272 TTLL3Q9Y4R7 772 aa13.41□□□□□ -0.26
CTDSP1-208ENST00000482272 PCDHGA7Q9Y5G6 932 aa13.41□□□□□ -0.26
CTDSP1-208ENST00000482272 BPTFQ12830 3046 aa13.41□□□□□ -0.26
CTDSP1-208ENST00000482272 CAPN8A6NHC0 703 aa13.4□□□□□ -0.26
CTDSP1-208ENST00000482272 CBFA2T2O43439 604 aa13.4□□□□□ -0.26
CTDSP1-208ENST00000482272 AKR1B10O60218 316 aa13.4□□□□□ -0.26
CTDSP1-208ENST00000482272 IVLP07476 585 aa13.4□□□□□ -0.26
CTDSP1-208ENST00000482272 TPM1P09493 284 aa13.4□□□□□ -0.26
CTDSP1-208ENST00000482272 SLC5A2P31639 672 aa13.4□□□□□ -0.26
CTDSP1-208ENST00000482272 POLD2P49005 469 aa13.4□□□□□ -0.26
CTDSP1-208ENST00000482272 B4GALNT1Q00973 533 aa13.4□□□□□ -0.26
CTDSP1-208ENST00000482272 DSC2Q02487 901 aa13.4□□□□□ -0.26
CTDSP1-208ENST00000482272 ZFP36L1Q07352 338 aaKnown RBP13.4□□□□□ -0.26
CTDSP1-208ENST00000482272 SLC10A2Q12908 348 aaPredicted RBP13.4□□□□□ -0.26
CTDSP1-208ENST00000482272 TRIM14Q14142 442 aa13.4□□□□□ -0.26
CTDSP1-208ENST00000482272 ALG1LQ6GMV1 187 aa13.4□□□□□ -0.26
CTDSP1-208ENST00000482272 CCDC81Q6ZN84 652 aa13.4□□□□□ -0.26
CTDSP1-208ENST00000482272 SPRED1Q7Z699 444 aa13.4□□□□□ -0.26
CTDSP1-208ENST00000482272 PIM3Q86V86 326 aa13.4□□□□□ -0.26
CTDSP1-208ENST00000482272 NRROSQ86YC3 692 aa13.4□□□□□ -0.26
CTDSP1-208ENST00000482272 JAMLQ86YT9 394 aa13.4□□□□□ -0.26
CTDSP1-208ENST00000482272 NRSN1Q8IZ57 195 aa13.4□□□□□ -0.26
CTDSP1-208ENST00000482272 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.4□□□□□ -0.26
CTDSP1-208ENST00000482272 PQLC3Q8N755 202 aa13.4□□□□□ -0.26
CTDSP1-208ENST00000482272 CCNYQ8ND76 341 aa13.4□□□□□ -0.26
CTDSP1-208ENST00000482272 WBP1Q96G27 269 aa13.4□□□□□ -0.26
CTDSP1-208ENST00000482272 ZNF830Q96NB3 372 aaPredicted RBP13.4□□□□□ -0.26
CTDSP1-208ENST00000482272 CMKLR1Q99788 373 aa13.4□□□□□ -0.26
CTDSP1-208ENST00000482272 AKAP7Q9P0M2 348 aaPredicted RBP13.4□□□□□ -0.26
CTDSP1-208ENST00000482272 TAAR2Q9P1P5 351 aa13.4□□□□□ -0.26
CTDSP1-208ENST00000482272 CHKBQ9Y259 395 aa13.4□□□□□ -0.26
CTDSP1-208ENST00000482272 ST14Q9Y5Y6 855 aa13.4□□□□□ -0.26
CTDSP1-208ENST00000482272 SSU72P8A0A1W2PR75 194 aa13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 ECEL1O95672 775 aa13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 CPNE6O95741 557 aa13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 PRB1P04280 392 aa13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 TMEM253P0C7T8 217 aa13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 KDELR1P24390 212 aa13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 AK4P27144 223 aaPredicted RBP13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 ALDH4A1P30038 563 aa13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 MAN1A1P33908 653 aa13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 ADCY8P40145 1251 aa13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 RPL26P61254 145 aaKnown RBP13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 CTBSQ01459 385 aa13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 CLPPQ16740 277 aaPredicted RBP13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 SKOR2Q2VWA4 1001 aaPredicted RBP13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 DOK6Q6PKX4 331 aa13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 SLC30A9Q6PML9 568 aa13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 ADAMTSL4Q6UY14 1074 aa13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 ZNF765Q7L2R6 523 aa13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 C17orf82Q86X59 251 aaPredicted RBP13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 CCDC13Q8IYE1 715 aa13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 EXD1Q8NHP7 514 aa13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 ARRDC2Q8TBH0 407 aa13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 SNRNP27Q8WVK2 155 aaKnown RBP13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 SCAMP4Q969E2 229 aa13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 FAF2Q96CS3 445 aa13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 DNAJC7Q99615 494 aa13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 CHP1Q99653 195 aa13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 TDRD1Q9BXT4 1180 aaKnown RBP13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 MAK16Q9BXY0 300 aaKnown RBP13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 CDH19Q9H159 772 aa13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 PCDH9Q9HC56 1237 aa13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 WDR70Q9NW82 654 aa13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 PISDQ9UG56 409 aa13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 RPL26L1Q9UNX3 145 aaKnown RBP13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 LOXL2Q9Y4K0 774 aa13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 SCN8AQ9UQD0 1980 aa13.39□□□□□ -0.27
CTDSP1-208ENST00000482272 K7ENP7 123 aa13.38□□□□□ -0.27
CTDSP1-208ENST00000482272 NVLO15381 856 aaKnown RBP13.38□□□□□ -0.27
CTDSP1-208ENST00000482272 B4GAT1O43505 415 aa13.38□□□□□ -0.27
CTDSP1-208ENST00000482272 CLDN7O95471 211 aa13.38□□□□□ -0.27
CTDSP1-208ENST00000482272 ASMTLO95671 621 aa13.38□□□□□ -0.27
CTDSP1-208ENST00000482272 SOD1P00441 154 aa13.38□□□□□ -0.27
CTDSP1-208ENST00000482272 HGFP14210 728 aa13.38□□□□□ -0.27
CTDSP1-208ENST00000482272 ACTR1BP42025 376 aa13.38□□□□□ -0.27
CTDSP1-208ENST00000482272 ARHGAP25P42331 645 aa13.38□□□□□ -0.27
CTDSP1-208ENST00000482272 MAZP56270 477 aaKnown RBP13.38□□□□□ -0.27
CTDSP1-208ENST00000482272 ACTR1AP61163 376 aa13.38□□□□□ -0.27
CTDSP1-208ENST00000482272 GBE1Q04446 702 aa13.38□□□□□ -0.27
CTDSP1-208ENST00000482272 MESDQ14696 234 aa13.38□□□□□ -0.27
CTDSP1-208ENST00000482272 AMZ1Q400G9 498 aa13.38□□□□□ -0.27
CTDSP1-208ENST00000482272 MAP9Q49MG5 647 aa13.38□□□□□ -0.27
CTDSP1-208ENST00000482272 PHF19Q5T6S3 580 aa13.38□□□□□ -0.27
CTDSP1-208ENST00000482272 INO80CQ6PI98 192 aaPredicted RBP13.38□□□□□ -0.27
CTDSP1-208ENST00000482272 SLC35G2Q8TBE7 412 aa13.38□□□□□ -0.27
CTDSP1-208ENST00000482272 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.38□□□□□ -0.27
CTDSP1-208ENST00000482272 RAPGEF5Q92565 580 aa13.38□□□□□ -0.27
CTDSP1-208ENST00000482272 HDAC11Q96DB2 347 aa13.38□□□□□ -0.27
CTDSP1-208ENST00000482272 SCARF2Q96GP6 870 aaPredicted RBP13.38□□□□□ -0.27
CTDSP1-208ENST00000482272 RNF157Q96PX1 679 aa13.38□□□□□ -0.27
CTDSP1-208ENST00000482272 OR2M4Q96R27 311 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms