RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 BAIAP2L1Q9UHR4 511 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 ADGRF5Q8IZF2 1346 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 CENPVL1A0A0U1RR11 272 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 TRBC2A0A5B9 178 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 OR6C74A6NCV1 312 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 SLC9B1P1A6NJY1 282 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 RAB27BO00194 218 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 PEX12O00623 359 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 SYN3O14994 580 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 ANGPT2O15123 496 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 ADAMDEC1O15204 470 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 GMFGO60234 142 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 ZNF821O75541 412 aaPredicted RBP4.18□□□□□ -1.74
VPS41-212ENST00000482217 CTAG2O75638 210 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 AKAP3O75969 853 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 SPDEFO95238 335 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 CCNDBP1O95273 360 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 AK1P00568 194 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 FSHBP01225 129 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 LIPFP07098 398 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 CYP3A4P08684 503 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 ARP10275 920 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 KRT5P13647 590 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 KRT4P19013 534 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 SAT1P21673 171 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 KCNA3P22001 575 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 AHCYP23526 432 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 PTPN4P29074 926 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 BSGP35613 385 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 CRKLP46109 303 aaKnown RBP4.18□□□□□ -1.74
VPS41-212ENST00000482217 CLCNKBP51801 687 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 BMXP51813 675 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 MFAP3P55082 362 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 DDX39BQ13838 428 aaKnown RBP4.18□□□□□ -1.74
VPS41-212ENST00000482217 CBFBQ13951 182 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 BTG3Q14201 252 aaPredicted RBP4.18□□□□□ -1.74
VPS41-212ENST00000482217 RCN1Q15293 331 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 TRIM71Q2Q1W2 868 aaKnown RBP4.18□□□□□ -1.74
VPS41-212ENST00000482217 PCGF3Q3KNV8 242 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 CRY2Q49AN0 593 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 ABHD17BQ5VST6 288 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 PLAG1Q6DJT9 500 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 TTC19Q6DKK2 380 aaPredicted RBP4.18□□□□□ -1.74
VPS41-212ENST00000482217 FCRL6Q6DN72 434 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 NCEH1Q6PIU2 408 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 CES3Q6UWW8 571 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 CUZD1Q86UP6 607 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 VASH2Q86V25 355 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 ZNF280BQ86YH2 543 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 LNX2Q8N448 690 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 OR13C2Q8NGS9 318 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 MIPOL1Q8TD10 442 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 BPIFB1Q8TDL5 484 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 AZIN2Q96A70 460 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 FAM136AQ96C01 138 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 EFHD2Q96C19 240 aaPredicted RBP4.18□□□□□ -1.74
VPS41-212ENST00000482217 IFT74Q96LB3 600 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 SORCS2Q96PQ0 1159 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 MTMR9Q96QG7 549 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 GAL3ST4Q96RP7 486 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 FIZ1Q96SL8 496 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 KCNK16Q96T55 309 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 MLPHQ9BV36 600 aaPredicted RBP4.18□□□□□ -1.74
VPS41-212ENST00000482217 CDK19Q9BWU1 502 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 KRTAP9-8Q9BYQ0 159 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 WDR11Q9BZH6 1224 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 TRIM31Q9BZY9 425 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 RAB33BQ9H082 229 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 DCTPP1Q9H773 170 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 NRDE2Q9H7Z3 1164 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 KAT14Q9H8E8 782 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 POLR1BQ9H9Y6 1135 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 PLEKHA2Q9HB19 425 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 WDR6Q9NNW5 1121 aaKnown RBP4.18□□□□□ -1.74
VPS41-212ENST00000482217 MED4Q9NPJ6 270 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 HEYLQ9NQ87 328 aaPredicted RBP4.18□□□□□ -1.74
VPS41-212ENST00000482217 PFDN4Q9NQP4 134 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 MBNL1Q9NR56 388 aaKnown RBP4.18□□□□□ -1.74
VPS41-212ENST00000482217 ARHGEF3Q9NR81 526 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 TLR8Q9NR97 1041 aaKnown RBP4.18□□□□□ -1.74
VPS41-212ENST00000482217 AGPAT3Q9NRZ7 376 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 FAM212BQ9NTI7 297 aaPredicted RBP4.18□□□□□ -1.74
VPS41-212ENST00000482217 IL20Q9NYY1 176 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 DNMT3BQ9UBC3 853 aaKnown RBP4.18□□□□□ -1.74
VPS41-212ENST00000482217 DNAJB11Q9UBS4 358 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 SLC25A10Q9UBX3 287 aaPredicted RBP4.18□□□□□ -1.74
VPS41-212ENST00000482217 CNOT7Q9UIV1 285 aaKnown RBP4.18□□□□□ -1.74
VPS41-212ENST00000482217 ANAPC2Q9UJX6 822 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 NDRG4Q9ULP0 352 aaKnown RBP4.18□□□□□ -1.74
VPS41-212ENST00000482217 MTMR6Q9Y217 621 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 DLGAP4Q9Y2H0 992 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 ADAM18Q9Y3Q7 739 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 PCDHA10Q9Y5I2 948 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 CDY1Q9Y6F8 540 aa4.18□□□□□ -1.74
VPS41-212ENST00000482217 PIPSLA2A3N6 862 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 OR2A25A4D2G3 310 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 H7C4K7 107 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 CASC3O15234 703 aaKnown RBP4.17□□□□□ -1.74
VPS41-212ENST00000482217 ZW10O43264 779 aa4.17□□□□□ -1.74
VPS41-212ENST00000482217 NUDT21O43809 227 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms