RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 ZBED6P86452 979 aa5.73□□□□□ -1.49
SF3B1-210ENST00000482158 CRYZQ08257 329 aaKnown RBP5.73□□□□□ -1.49
SF3B1-210ENST00000482158 EPS8Q12929 822 aa5.73□□□□□ -1.49
SF3B1-210ENST00000482158 IKQ13123 557 aaPredicted RBP5.73□□□□□ -1.49
SF3B1-210ENST00000482158 PCGF3Q3KNV8 242 aa5.73□□□□□ -1.49
SF3B1-210ENST00000482158 ZSCAN23Q3MJ62 389 aa5.73□□□□□ -1.49
SF3B1-210ENST00000482158 TMEM198Q66K66 360 aa5.73□□□□□ -1.49
SF3B1-210ENST00000482158 SIGIRRQ6IA17 410 aa5.73□□□□□ -1.49
SF3B1-210ENST00000482158 ENOSF1Q7L5Y1 443 aa5.73□□□□□ -1.49
SF3B1-210ENST00000482158 CLIP4Q8N3C7 705 aa5.73□□□□□ -1.49
SF3B1-210ENST00000482158 C17orf53Q8N3J3 647 aaPredicted RBP5.73□□□□□ -1.49
SF3B1-210ENST00000482158 OR14A16Q8NHC5 309 aa5.73□□□□□ -1.49
SF3B1-210ENST00000482158 B4GALNT2Q8NHY0 566 aa5.73□□□□□ -1.49
SF3B1-210ENST00000482158 MIB2Q96AX9 1013 aa5.73□□□□□ -1.49
SF3B1-210ENST00000482158 RHBDF1Q96CC6 855 aa5.73□□□□□ -1.49
SF3B1-210ENST00000482158 GRAMD2BQ96HH9 432 aa5.73□□□□□ -1.49
SF3B1-210ENST00000482158 SH3GL2Q99962 352 aa5.73□□□□□ -1.49
SF3B1-210ENST00000482158 SEBOXQ9HB31 216 aaPredicted RBP5.73□□□□□ -1.49
SF3B1-210ENST00000482158 PLSCR4Q9NRQ2 329 aa5.73□□□□□ -1.49
SF3B1-210ENST00000482158 ACSS1Q9NUB1 689 aaPredicted RBP5.73□□□□□ -1.49
SF3B1-210ENST00000482158 OGFRQ9NZT2 677 aa5.73□□□□□ -1.49
SF3B1-210ENST00000482158 CWC15Q9P013 229 aaKnown RBP5.73□□□□□ -1.49
SF3B1-210ENST00000482158 MYO6Q9UM54 1294 aa5.73□□□□□ -1.49
SF3B1-210ENST00000482158 R3HDM2Q9Y2K5 976 aaKnown RBP5.73□□□□□ -1.49
SF3B1-210ENST00000482158 PAM16Q9Y3D7 125 aa5.73□□□□□ -1.49
SF3B1-210ENST00000482158 IGLV5-52A0A0A0MRZ9 124 aa5.72□□□□□ -1.49
SF3B1-210ENST00000482158 A0A0U1RQJ8 604 aa5.72□□□□□ -1.49
SF3B1-210ENST00000482158 A0A1W2PR77 199 aa5.72□□□□□ -1.49
SF3B1-210ENST00000482158 PLRG1O43660 514 aaKnown RBP5.72□□□□□ -1.49
SF3B1-210ENST00000482158 HS6ST1O60243 411 aa5.72□□□□□ -1.49
SF3B1-210ENST00000482158 TSPAN9O75954 239 aa5.72□□□□□ -1.49
SF3B1-210ENST00000482158 TPPPO94811 219 aa5.72□□□□□ -1.49
SF3B1-210ENST00000482158 SELLP14151 372 aa5.72□□□□□ -1.49
SF3B1-210ENST00000482158 GCH1P30793 250 aa5.72□□□□□ -1.49
SF3B1-210ENST00000482158 SSTR2P30874 369 aa5.72□□□□□ -1.49
SF3B1-210ENST00000482158 HOXC9P31274 260 aa5.72□□□□□ -1.49
SF3B1-210ENST00000482158 STX2P32856 288 aa5.72□□□□□ -1.49
SF3B1-210ENST00000482158 RAD52P43351 418 aa5.72□□□□□ -1.49
SF3B1-210ENST00000482158 BRWD1-AS2P59051 145 aa5.72□□□□□ -1.49
SF3B1-210ENST00000482158 MRPS34P82930 218 aaKnown RBP5.72□□□□□ -1.49
SF3B1-210ENST00000482158 AMZ1Q400G9 498 aa5.72□□□□□ -1.49
SF3B1-210ENST00000482158 SETMARQ53H47 684 aaPredicted RBP5.72□□□□□ -1.49
SF3B1-210ENST00000482158 ZNF280DQ6N043 979 aa5.72□□□□□ -1.49
SF3B1-210ENST00000482158 CHERPQ8IWX8 916 aaKnown RBP5.72□□□□□ -1.49
SF3B1-210ENST00000482158 BEST3Q8N1M1 668 aa5.72□□□□□ -1.49
SF3B1-210ENST00000482158 OR2AK2Q8NG84 335 aa5.72□□□□□ -1.49
SF3B1-210ENST00000482158 HARBI1Q96MB7 349 aa5.72□□□□□ -1.49
SF3B1-210ENST00000482158 NCAPGQ9BPX3 1015 aa5.72□□□□□ -1.49
SF3B1-210ENST00000482158 NUDT16L1Q9BRJ7 211 aaKnown RBP5.72□□□□□ -1.49
SF3B1-210ENST00000482158 MXD3Q9BW11 206 aa5.72□□□□□ -1.49
SF3B1-210ENST00000482158 PIGMQ9H3S5 423 aa5.72□□□□□ -1.49
SF3B1-210ENST00000482158 C17orf75Q9HAS0 396 aa5.72□□□□□ -1.49
SF3B1-210ENST00000482158 COPG2Q9UBF2 871 aa5.72□□□□□ -1.49
SF3B1-210ENST00000482158 ACSL5Q9ULC5 683 aa5.72□□□□□ -1.49
SF3B1-210ENST00000482158 TTC7AQ9ULT0 858 aaPredicted RBP5.72□□□□□ -1.49
SF3B1-210ENST00000482158 hDV102S1A0JD36 115 aa5.71□□□□□ -1.5
SF3B1-210ENST00000482158 LINC01553A4QN01 128 aa5.71□□□□□ -1.5
SF3B1-210ENST00000482158 SOCS6O14544 535 aa5.71□□□□□ -1.5
SF3B1-210ENST00000482158 DAB1O75553 588 aa5.71□□□□□ -1.5
SF3B1-210ENST00000482158 OAZ2O95190 189 aa5.71□□□□□ -1.5
SF3B1-210ENST00000482158 GLUD1P00367 558 aa5.71□□□□□ -1.5
SF3B1-210ENST00000482158 ICAM1P05362 532 aa5.71□□□□□ -1.5
SF3B1-210ENST00000482158 SRPRAP08240 638 aaKnown RBP5.71□□□□□ -1.5
SF3B1-210ENST00000482158 ZNF12P17014 697 aa5.71□□□□□ -1.5
SF3B1-210ENST00000482158 TMEM11P17152 192 aa5.71□□□□□ -1.5
SF3B1-210ENST00000482158 PON1P27169 355 aa5.71□□□□□ -1.5
SF3B1-210ENST00000482158 GLUD2P49448 558 aa5.71□□□□□ -1.5
SF3B1-210ENST00000482158 SNX16P57768 344 aa5.71□□□□□ -1.5
SF3B1-210ENST00000482158 ACSM2AQ08AH3 577 aa5.71□□□□□ -1.5
SF3B1-210ENST00000482158 GRIK2Q13002 908 aa5.71□□□□□ -1.5
SF3B1-210ENST00000482158 DHX34Q14147 1143 aaKnown RBP5.71□□□□□ -1.5
SF3B1-210ENST00000482158 ACSM2BQ68CK6 577 aa5.71□□□□□ -1.5
SF3B1-210ENST00000482158 SLC36A4Q6YBV0 504 aa5.71□□□□□ -1.5
SF3B1-210ENST00000482158 NRROSQ86YC3 692 aa5.71□□□□□ -1.5
SF3B1-210ENST00000482158 DSELQ8IZU8 1212 aa5.71□□□□□ -1.5
SF3B1-210ENST00000482158 PGBD5Q8N414 524 aa5.71□□□□□ -1.5
SF3B1-210ENST00000482158 TRPC4APQ8TEL6 797 aa5.71□□□□□ -1.5
SF3B1-210ENST00000482158 NSMCE1Q8WV22 266 aa5.71□□□□□ -1.5
SF3B1-210ENST00000482158 CALML4Q96GE6 196 aa5.71□□□□□ -1.5
SF3B1-210ENST00000482158 MMTAG2Q9BU76 263 aaKnown RBP5.71□□□□□ -1.5
SF3B1-210ENST00000482158 ANKEF1Q9NU02 776 aa5.71□□□□□ -1.5
SF3B1-210ENST00000482158 PAG1Q9NWQ8 432 aa5.71□□□□□ -1.5
SF3B1-210ENST00000482158 WSB2Q9NYS7 404 aaPredicted RBP5.71□□□□□ -1.5
SF3B1-210ENST00000482158 CLIC5Q9NZA1 410 aa5.71□□□□□ -1.5
SF3B1-210ENST00000482158 MYMKA6NI61 221 aa5.7□□□□□ -1.5
SF3B1-210ENST00000482158 H3BQ06 376 aaPredicted RBP5.7□□□□□ -1.5
SF3B1-210ENST00000482158 PAPSS1O43252 624 aaPredicted RBP5.7□□□□□ -1.5
SF3B1-210ENST00000482158 ENTPD3O75355 529 aa5.7□□□□□ -1.5
SF3B1-210ENST00000482158 SERPINI2O75830 405 aa5.7□□□□□ -1.5
SF3B1-210ENST00000482158 BEST1O76090 585 aa5.7□□□□□ -1.5
SF3B1-210ENST00000482158 ANXA7P20073 488 aaKnown RBP5.7□□□□□ -1.5
SF3B1-210ENST00000482158 SCP2P22307 547 aa5.7□□□□□ -1.5
SF3B1-210ENST00000482158 UBA1P22314 1058 aaKnown RBP5.7□□□□□ -1.5
SF3B1-210ENST00000482158 HNRNPH2P55795 449 aaKnown RBP5.7□□□□□ -1.5
SF3B1-210ENST00000482158 TFAP4Q01664 338 aa5.7□□□□□ -1.5
SF3B1-210ENST00000482158 DSC1Q08554 894 aa5.7□□□□□ -1.5
SF3B1-210ENST00000482158 KCTD2Q14681 263 aa5.7□□□□□ -1.5
SF3B1-210ENST00000482158 ZNF805Q5CZA5 627 aa5.7□□□□□ -1.5
SF3B1-210ENST00000482158 DUS1LQ6P1R4 473 aaKnown RBP5.7□□□□□ -1.5
SF3B1-210ENST00000482158 CACNA2D4Q7Z3S7 1137 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms