RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 CBX8Q9HC52 389 aa18.78■□□□□ 0.6
ABCF3-214ENST00000480562 FOXJ2Q9P0K8 574 aa18.78■□□□□ 0.6
ABCF3-214ENST00000480562 SLC17A4Q9Y2C5 497 aa18.78■□□□□ 0.6
ABCF3-214ENST00000480562 TMEM98Q9Y2Y6 226 aa18.78■□□□□ 0.6
ABCF3-214ENST00000480562 PPIL1Q9Y3C6 166 aa18.78■□□□□ 0.6
ABCF3-214ENST00000480562 A0A1W2PQJ5 194 aa18.77■□□□□ 0.6
ABCF3-214ENST00000480562 FZD6O60353 706 aa18.77■□□□□ 0.6
ABCF3-214ENST00000480562 CPNE6O95741 557 aa18.77■□□□□ 0.6
ABCF3-214ENST00000480562 SOD1P00441 154 aa18.77■□□□□ 0.6
ABCF3-214ENST00000480562 SERPING1P05155 500 aa18.77■□□□□ 0.6
ABCF3-214ENST00000480562 TEAD1P28347 426 aa18.77■□□□□ 0.6
ABCF3-214ENST00000480562 PBX1P40424 430 aa18.77■□□□□ 0.6
ABCF3-214ENST00000480562 DSC2Q02487 901 aa18.77■□□□□ 0.6
ABCF3-214ENST00000480562 BIRC2Q13490 618 aa18.77■□□□□ 0.6
ABCF3-214ENST00000480562 ATP13A4Q4VNC1 1196 aa18.77■□□□□ 0.6
ABCF3-214ENST00000480562 ZNF574Q6ZN55 896 aaPredicted RBP18.77■□□□□ 0.6
ABCF3-214ENST00000480562 ZNF438Q7Z4V0 828 aa18.77■□□□□ 0.6
ABCF3-214ENST00000480562 TRIM74Q86UV6 250 aa18.77■□□□□ 0.6
ABCF3-214ENST00000480562 VASH2Q86V25 355 aa18.77■□□□□ 0.6
ABCF3-214ENST00000480562 LUZP1Q86V48 1076 aa18.77■□□□□ 0.6
ABCF3-214ENST00000480562 NAGSQ8N159 534 aa18.77■□□□□ 0.6
ABCF3-214ENST00000480562 FAM71BQ8TC56 605 aa18.77■□□□□ 0.6
ABCF3-214ENST00000480562 LRRN4Q8WUT4 740 aa18.77■□□□□ 0.6
ABCF3-214ENST00000480562 SCAMP4Q969E2 229 aa18.77■□□□□ 0.6
ABCF3-214ENST00000480562 TMEM159Q96B96 161 aa18.77■□□□□ 0.6
ABCF3-214ENST00000480562 AP2M1Q96CW1 435 aa18.77■□□□□ 0.6
ABCF3-214ENST00000480562 MED8Q96G25 268 aa18.77■□□□□ 0.6
ABCF3-214ENST00000480562 NUDT22Q9BRQ3 303 aa18.77■□□□□ 0.6
ABCF3-214ENST00000480562 RCOR3Q9P2K3 495 aaPredicted RBP18.77■□□□□ 0.6
ABCF3-214ENST00000480562 SETXQ7Z333 2677 aaKnown RBP18.77■□□□□ 0.6
ABCF3-214ENST00000480562 C9orf172C9J069 976 aa18.76■□□□□ 0.59
ABCF3-214ENST00000480562 MYO1FO00160 1098 aa18.76■□□□□ 0.59
ABCF3-214ENST00000480562 IVLP07476 585 aa18.76■□□□□ 0.59
ABCF3-214ENST00000480562 LIPCP11150 499 aa18.76■□□□□ 0.59
ABCF3-214ENST00000480562 CD1CP29017 333 aa18.76■□□□□ 0.59
ABCF3-214ENST00000480562 GARSP41250 739 aaKnown RBP18.76■□□□□ 0.59
ABCF3-214ENST00000480562 ARSEP51690 589 aa18.76■□□□□ 0.59
ABCF3-214ENST00000480562 PTSQ03393 145 aa18.76■□□□□ 0.59
ABCF3-214ENST00000480562 DPTQ07507 201 aa18.76■□□□□ 0.59
ABCF3-214ENST00000480562 GALNT2Q10471 571 aa18.76■□□□□ 0.59
ABCF3-214ENST00000480562 DPYSL3Q14195 570 aa18.76■□□□□ 0.59
ABCF3-214ENST00000480562 CCDC122Q5T0U0 273 aa18.76■□□□□ 0.59
ABCF3-214ENST00000480562 NKAIN2Q5VXU1 208 aa18.76■□□□□ 0.59
ABCF3-214ENST00000480562 NCBP2-AS2Q69YL0 99 aa18.76■□□□□ 0.59
ABCF3-214ENST00000480562 MARK2Q7KZI7 788 aaKnown RBP18.76■□□□□ 0.59
ABCF3-214ENST00000480562 LRRC49Q8IUZ0 686 aa18.76■□□□□ 0.59
ABCF3-214ENST00000480562 NDUFAF2Q8N183 169 aa18.76■□□□□ 0.59
ABCF3-214ENST00000480562 RCBTB1Q8NDN9 531 aa18.76■□□□□ 0.59
ABCF3-214ENST00000480562 AGAP2Q99490 1192 aa18.76■□□□□ 0.59
ABCF3-214ENST00000480562 POLR1EQ9GZS1 481 aaKnown RBP18.76■□□□□ 0.59
ABCF3-214ENST00000480562 TTLL3Q9Y4R7 772 aa18.76■□□□□ 0.59
ABCF3-214ENST00000480562 FLNBO75369 2602 aaKnown RBP18.76■□□□□ 0.59
ABCF3-214ENST00000480562 TENM4Q6N022 2769 aa18.76■□□□□ 0.59
ABCF3-214ENST00000480562 A0A0J9YYE9 177 aa18.75■□□□□ 0.59
ABCF3-214ENST00000480562 J3QKU1 62 aa18.75■□□□□ 0.59
ABCF3-214ENST00000480562 PPM1DO15297 605 aa18.75■□□□□ 0.59
ABCF3-214ENST00000480562 TRBC1P01850 177 aa18.75■□□□□ 0.59
ABCF3-214ENST00000480562 CCL4P13236 92 aa18.75■□□□□ 0.59
ABCF3-214ENST00000480562 ACTR1BP42025 376 aa18.75■□□□□ 0.59
ABCF3-214ENST00000480562 EPHB1P54762 984 aa18.75■□□□□ 0.59
ABCF3-214ENST00000480562 UBASH3AP57075 661 aa18.75■□□□□ 0.59
ABCF3-214ENST00000480562 ACTR1AP61163 376 aa18.75■□□□□ 0.59
ABCF3-214ENST00000480562 ZBED6P86452 979 aa18.75■□□□□ 0.59
ABCF3-214ENST00000480562 NR1D2Q14995 579 aa18.75■□□□□ 0.59
ABCF3-214ENST00000480562 PAFAH1B3Q15102 231 aaKnown RBP18.75■□□□□ 0.59
ABCF3-214ENST00000480562 HADHQ16836 314 aaKnown RBP18.75■□□□□ 0.59
ABCF3-214ENST00000480562 ALKBH5Q6P6C2 394 aaKnown RBP18.75■□□□□ 0.59
ABCF3-214ENST00000480562 ADAMTSL4Q6UY14 1074 aa18.75■□□□□ 0.59
ABCF3-214ENST00000480562 ZNF564Q8TBZ8 553 aaPredicted RBP18.75■□□□□ 0.59
ABCF3-214ENST00000480562 MAML1Q92585 1016 aa18.75■□□□□ 0.59
ABCF3-214ENST00000480562 SCARF2Q96GP6 870 aaPredicted RBP18.75■□□□□ 0.59
ABCF3-214ENST00000480562 OR2M4Q96R27 311 aa18.75■□□□□ 0.59
ABCF3-214ENST00000480562 RBM22Q9NW64 420 aaKnown RBP eCLIP18.75■□□□□ 0.59
ABCF3-214ENST00000480562 CAPN11Q9UMQ6 739 aa18.75■□□□□ 0.59
ABCF3-214ENST00000480562 CHKBQ9Y259 395 aa18.75■□□□□ 0.59
ABCF3-214ENST00000480562 IGHV5-10-1A0A0J9YXX1 117 aa18.74■□□□□ 0.59
ABCF3-214ENST00000480562 SYCE3A1L190 88 aa18.74■□□□□ 0.59
ABCF3-214ENST00000480562 B8ZZF3 427 aa18.74■□□□□ 0.59
ABCF3-214ENST00000480562 MATN3O15232 486 aa18.74■□□□□ 0.59
ABCF3-214ENST00000480562 STC1P52823 247 aa18.74■□□□□ 0.59
ABCF3-214ENST00000480562 TPM4P67936 248 aa18.74■□□□□ 0.59
ABCF3-214ENST00000480562 ANKRD20A8PQ5CZ79 823 aa18.74■□□□□ 0.59
ABCF3-214ENST00000480562 MANEAQ5SRI9 462 aa18.74■□□□□ 0.59
ABCF3-214ENST00000480562 EXD3Q8N9H8 876 aa18.74■□□□□ 0.59
ABCF3-214ENST00000480562 KCTD6Q8NC69 237 aa18.74■□□□□ 0.59
ABCF3-214ENST00000480562 SGF29Q96ES7 293 aa18.74■□□□□ 0.59
ABCF3-214ENST00000480562 CCDC74BQ96LY2 380 aa18.74■□□□□ 0.59
ABCF3-214ENST00000480562 RIOK2Q9BVS4 552 aaKnown RBP18.74■□□□□ 0.59
ABCF3-214ENST00000480562 CDH19Q9H159 772 aa18.74■□□□□ 0.59
ABCF3-214ENST00000480562 AKAP7Q9P0M2 348 aaPredicted RBP18.74■□□□□ 0.59
ABCF3-214ENST00000480562 SEPT10Q9P0V9 454 aa18.74■□□□□ 0.59
ABCF3-214ENST00000480562 TRBV23OR9-2A0A075B6M9 112 aa18.73■□□□□ 0.59
ABCF3-214ENST00000480562 PYCARD-AS1I3L0S3 204 aa18.73■□□□□ 0.59
ABCF3-214ENST00000480562 INPP4BO15327 924 aa18.73■□□□□ 0.59
ABCF3-214ENST00000480562 ZW10O43264 779 aa18.73■□□□□ 0.59
ABCF3-214ENST00000480562 MPSTP25325 297 aa18.73■□□□□ 0.59
ABCF3-214ENST00000480562 GPR3P46089 330 aa18.73■□□□□ 0.59
ABCF3-214ENST00000480562 TAS2R40P59535 323 aa18.73■□□□□ 0.59
ABCF3-214ENST00000480562 NIPAL4Q0D2K0 466 aa18.73■□□□□ 0.59
ABCF3-214ENST00000480562 IFI16Q16666 785 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms