RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 PBX1P40424 430 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 MATR3P43243 847 aaKnown RBP eCLIP4.13□□□□□ -1.75
CMSS1-204ENST00000479555 GRK6P43250 576 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 MXI1P50539 228 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 BLVRAP53004 296 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 ALDH18A1P54886 795 aaKnown RBP4.13□□□□□ -1.75
CMSS1-204ENST00000479555 SUMO2P61956 95 aaKnown RBP4.13□□□□□ -1.75
CMSS1-204ENST00000479555 DR1Q01658 176 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 CDR2Q01850 454 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 CYP4A11Q02928 519 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 SLC34A1Q06495 639 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 PPIDQ08752 370 aaKnown RBP4.13□□□□□ -1.75
CMSS1-204ENST00000479555 AP1B1Q10567 949 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 DNAJC3Q13217 504 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 ITGA7Q13683 1181 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 ATP1A4Q13733 1029 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 RCN2Q14257 317 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 PTK2BQ14289 1009 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 WTAPQ15007 396 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 ARHGEF6Q15052 776 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 CNPY1Q3B7I2 92 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 GALNTL6Q49A17 601 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 C10orf76Q5T2E6 689 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 CYP4A22Q5TCH4 519 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 IL23RQ5VWK5 629 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 RAP1GAP2Q684P5 730 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 GALNT17Q6IS24 598 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 KRTAP5-4Q6L8H1 288 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 ERAP2Q6P179 960 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 PACS1Q6VY07 963 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 RAD9BQ6WBX8 426 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 USP49Q70CQ1 688 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 ASRGL1Q7L266 308 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 MIER3Q7Z3K6 550 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 NET1Q7Z628 596 aaPredicted RBP4.13□□□□□ -1.75
CMSS1-204ENST00000479555 PIM3Q86V86 326 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 RASGRP3Q8IV61 690 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 ZBED8Q8IZ13 594 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 LSMEM2Q8N112 164 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 CSGALNACT2Q8N6G5 542 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 ARFGAP1Q8N6T3 406 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 ANKRD42Q8N9B4 389 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 DDHD1Q8NEL9 900 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 TNIP2Q8NFZ5 429 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 FNDC8Q8TC99 324 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 RASSF5Q8WWW0 418 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 RAPGEF5Q92565 580 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 EME1Q96AY2 570 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 CTHRC1Q96CG8 243 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 WDYHV1Q96HA8 205 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 THOC3Q96J01 351 aaKnown RBP4.13□□□□□ -1.75
CMSS1-204ENST00000479555 ZNF333Q96JL9 665 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 ZBTB45Q96K62 511 aaPredicted RBP4.13□□□□□ -1.75
CMSS1-204ENST00000479555 NUDCD1Q96RS6 583 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 USP28Q96RU2 1077 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 RMDN3Q96TC7 470 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 ZNF184Q99676 751 aaPredicted RBP4.13□□□□□ -1.75
CMSS1-204ENST00000479555 DESI2Q9BSY9 194 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 HAUS8Q9BT25 410 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 FAM167BQ9BTA0 163 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 TRMOQ9BU70 441 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 TMEM109Q9BVC6 243 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 SCNM1Q9BWG6 230 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 NACAP1Q9BZK3 213 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 EDEM3Q9BZQ6 932 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 CLK4Q9HAZ1 481 aaKnown RBP4.13□□□□□ -1.75
CMSS1-204ENST00000479555 PLGRKTQ9HBL7 147 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 SLC38A10Q9HBR0 1119 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 AGO4Q9HCK5 861 aaKnown RBP4.13□□□□□ -1.75
CMSS1-204ENST00000479555 CD209Q9NNX6 404 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 SAR1AQ9NR31 198 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 ECHDC1Q9NTX5 307 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 PANK4Q9NVE7 773 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 RHBDL2Q9NX52 303 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 UBAP1Q9NZ09 502 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 ADAM22Q9P0K1 906 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 LRFN1Q9P244 771 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 UVRAGQ9P2Y5 699 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 ADD3Q9UEY8 706 aaKnown RBP4.13□□□□□ -1.75
CMSS1-204ENST00000479555 LIMA1Q9UHB6 759 aaKnown RBP4.13□□□□□ -1.75
CMSS1-204ENST00000479555 PCSK1NQ9UHG2 260 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 DNAJC12Q9UKB3 198 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 GTF3C4Q9UKN8 822 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 CHMP2BQ9UQN3 213 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 UTP11Q9Y3A2 253 aaKnown RBP4.13□□□□□ -1.75
CMSS1-204ENST00000479555 MROH7-TTC4A0A0A0MT08 1334 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 WDR19Q8NEZ3 1342 aa4.13□□□□□ -1.75
CMSS1-204ENST00000479555 NCAPD2Q15021 1401 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 KNDC1Q76NI1 1749 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 NOTCH4Q99466 2003 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 NEO1Q92859 1461 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.12□□□□□ -1.75
CMSS1-204ENST00000479555 A0A0J9YVX5 310 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 PVALEFA0A1B0GWK0 134 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 KANSL1LA0AUZ9 987 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 OR2W5A6NFC9 320 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 E9PBE3 544 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 CPLX1O14810 134 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 RASGRF2O14827 1237 aa4.12□□□□□ -1.75
CMSS1-204ENST00000479555 PIP5K1BO14986 540 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms