RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 PTPN9P43378 593 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 CLCN3P51790 818 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 ADARB1P78563 741 aaKnown RBP13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 CUL2Q13617 745 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 HIST2H2ACQ16777 129 aaPredicted RBP13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 CYBRD1Q53TN4 286 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 CCNJQ5T5M9 372 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 SMYD5Q6GMV2 418 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 LRRC8EQ6NSJ5 796 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 EFCAB12Q6NXP0 572 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 ERAP2Q6P179 960 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 SLC16A12Q6ZSM3 486 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 MAP4K3Q8IVH8 894 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 RAVER1Q8IY67 606 aaKnown RBP13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 TMEM192Q8IY95 271 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 SLC38A6Q8IZM9 456 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 SLC7A14Q8TBB6 771 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 RDH11Q8TC12 318 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 CANT1Q8WVQ1 401 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 TMEM40Q8WWA1 233 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 SPATA17Q96L03 361 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 ASB2Q96Q27 587 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 PI4K2AQ9BTU6 479 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 FUNDC2Q9BWH2 189 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 IL22Q9GZX6 179 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 NECTIN3Q9NQS3 549 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 TMEM181Q9P2C4 612 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 TXNDC16Q9P2K2 825 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 MYO9BQ13459 2157 aa13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 PRORSD1PA6NEY8 169 aa13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 H3BNC9 293 aa13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 CDK2AP1O14519 115 aa13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 GPR182O15218 404 aa13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 UPK1BO75841 260 aa13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 SRP72O76094 671 aaKnown RBP13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 NADKO95544 446 aaPredicted RBP13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 VTNP04004 478 aa13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 CFHP08603 1231 aa13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 LINC00271P0C7V0 271 aa13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 STAG3L1P0CL83 205 aa13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 CD1EP15812 388 aa13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 PSMA4P25789 261 aaKnown RBP13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 TYK2P29597 1187 aa13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 RRM2P31350 389 aa13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 SSTR3P32745 418 aaPredicted RBP13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 ETV3P41162 512 aa13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 RPS9P46781 194 aaKnown RBP13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 GALNT1Q10472 559 aaPredicted RBP13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 NPTX1Q15818 432 aa13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 KIZQ2M2Z5 673 aa13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 KCNT2Q6UVM3 1135 aa13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 TRMT1LQ7Z2T5 733 aaKnown RBP13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 ADAMTSL2Q86TH1 951 aa13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 ELMOD2Q8IZ81 293 aa13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 OFCC1Q8IZS5 231 aa13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 KCTD6Q8NC69 237 aa13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 TMEM35BQ8NCS4 154 aa13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 TOR1AIP2Q8NFQ8 470 aa13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 MUL1Q969V5 352 aa13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 CPXM1Q96SM3 734 aa13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 CACNA2D2Q9NY47 1150 aa13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 SNTG2Q9NY99 539 aa13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 WARS2Q9UGM6 360 aaKnown RBP13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 GINS2Q9Y248 185 aa13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 VWA7Q9Y334 891 aa13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 RWDD3Q9Y3V2 267 aa13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 DGKBQ9Y6T7 804 aa13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 MAU2Q9Y6X3 613 aa13.14□□□□□ -0.31
CNKSR3-204ENST00000479339 DHRS12A0PJE2 317 aa13.13□□□□□ -0.31
CNKSR3-204ENST00000479339 TRPC5OSA6NMA1 111 aa13.13□□□□□ -0.31
CNKSR3-204ENST00000479339 C5orf67F2Z3F1 127 aa13.13□□□□□ -0.31
CNKSR3-204ENST00000479339 H7C0C1 242 aa13.13□□□□□ -0.31
CNKSR3-204ENST00000479339 LRCH4O75427 683 aa13.13□□□□□ -0.31
CNKSR3-204ENST00000479339 DAB1O75553 588 aa13.13□□□□□ -0.31
CNKSR3-204ENST00000479339 CCNKO75909 580 aa13.13□□□□□ -0.31
CNKSR3-204ENST00000479339 GABARAPO95166 117 aa13.13□□□□□ -0.31
CNKSR3-204ENST00000479339 RB1P06400 928 aa13.13□□□□□ -0.31
CNKSR3-204ENST00000479339 APRTP07741 180 aa13.13□□□□□ -0.31
CNKSR3-204ENST00000479339 POLR2CP19387 275 aaPredicted RBP13.13□□□□□ -0.31
CNKSR3-204ENST00000479339 EIF2DP41214 584 aaKnown RBP13.13□□□□□ -0.31
CNKSR3-204ENST00000479339 ATP5OP48047 213 aa13.13□□□□□ -0.31
CNKSR3-204ENST00000479339 PPP2R2BQ00005 443 aa13.13□□□□□ -0.31
CNKSR3-204ENST00000479339 DUSP7Q16829 419 aa13.13□□□□□ -0.31
CNKSR3-204ENST00000479339 ZCCHC8Q6NZY4 707 aaKnown RBP13.13□□□□□ -0.31
CNKSR3-204ENST00000479339 TMEM270Q6UE05 265 aa13.13□□□□□ -0.31
CNKSR3-204ENST00000479339 CYP2R1Q6VVX0 501 aa13.13□□□□□ -0.31
CNKSR3-204ENST00000479339 IDO2Q6ZQW0 420 aa13.13□□□□□ -0.31
CNKSR3-204ENST00000479339 FKBP9P1Q75LS8 142 aa13.13□□□□□ -0.31
CNKSR3-204ENST00000479339 RALGPS2Q86X27 583 aaPredicted RBP13.13□□□□□ -0.31
CNKSR3-204ENST00000479339 CMTR2Q8IYT2 770 aaKnown RBP13.13□□□□□ -0.31
CNKSR3-204ENST00000479339 GIPC2Q8TF65 315 aa13.13□□□□□ -0.31
CNKSR3-204ENST00000479339 OSCP1Q8WVF1 389 aa13.13□□□□□ -0.31
CNKSR3-204ENST00000479339 CLP1Q92989 425 aaKnown RBP13.13□□□□□ -0.31
CNKSR3-204ENST00000479339 DACH2Q96NX9 599 aa13.13□□□□□ -0.31
CNKSR3-204ENST00000479339 OSMRQ99650 979 aa13.13□□□□□ -0.31
CNKSR3-204ENST00000479339 RGS18Q9NS28 235 aa13.13□□□□□ -0.31
CNKSR3-204ENST00000479339 TBC1D13Q9NVG8 400 aa13.13□□□□□ -0.31
CNKSR3-204ENST00000479339 WRAP73Q9P2S5 460 aaPredicted RBP13.13□□□□□ -0.31
CNKSR3-204ENST00000479339 UBA2Q9UBT2 640 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms