RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 HMGCLP35914 325 aa26.71■■□□□ 1.87
CCM2-211ENST00000478582 ZNF423Q2M1K9 1284 aa26.71■■□□□ 1.87
CCM2-211ENST00000478582 DBX2Q6ZNG2 339 aa26.71■■□□□ 1.87
CCM2-211ENST00000478582 RFLNAQ6ZTI6 216 aa26.71■■□□□ 1.87
CCM2-211ENST00000478582 PTAR1Q7Z6K3 402 aaPredicted RBP26.71■■□□□ 1.87
CCM2-211ENST00000478582 NAXDQ8IW45 347 aa26.71■■□□□ 1.87
CCM2-211ENST00000478582 PLA2G15Q8NCC3 412 aa26.71■■□□□ 1.87
CCM2-211ENST00000478582 RUNDC3BQ96NL0 473 aa26.71■■□□□ 1.87
CCM2-211ENST00000478582 DDX47Q9H0S4 455 aaKnown RBP26.71■■□□□ 1.87
CCM2-211ENST00000478582 CDH19Q9H159 772 aa26.71■■□□□ 1.87
CCM2-211ENST00000478582 RAD18Q9NS91 495 aa26.71■■□□□ 1.87
CCM2-211ENST00000478582 NFKBIL1Q9UBC1 381 aaPredicted RBP26.71■■□□□ 1.87
CCM2-211ENST00000478582 TMEM131Q92545 1883 aa26.7■■□□□ 1.87
CCM2-211ENST00000478582 GOLGA8CPA6NN73 597 aa26.7■■□□□ 1.86
CCM2-211ENST00000478582 AURKAO14965 403 aa26.7■■□□□ 1.86
CCM2-211ENST00000478582 DFNA5O60443 496 aa26.7■■□□□ 1.86
CCM2-211ENST00000478582 GAS8O95995 478 aa26.7■■□□□ 1.86
CCM2-211ENST00000478582 PCCBP05166 539 aa26.7■■□□□ 1.86
CCM2-211ENST00000478582 HOXC4P09017 264 aaPredicted RBP26.7■■□□□ 1.86
CCM2-211ENST00000478582 TSHRP16473 764 aa26.7■■□□□ 1.86
CCM2-211ENST00000478582 SLC22A18ASQ8N1D0 253 aa26.7■■□□□ 1.86
CCM2-211ENST00000478582 BLOC1S5Q8TDH9 187 aa26.7■■□□□ 1.86
CCM2-211ENST00000478582 CAMK1GQ96NX5 476 aa26.7■■□□□ 1.86
CCM2-211ENST00000478582 APOOQ9BUR5 198 aa26.7■■□□□ 1.86
CCM2-211ENST00000478582 ANGPTL2Q9UKU9 493 aa26.7■■□□□ 1.86
CCM2-211ENST00000478582 SPTY2D1-AS1A0A0U1RR47 76 aa26.69■■□□□ 1.86
CCM2-211ENST00000478582 ECEL1O95672 775 aa26.69■■□□□ 1.86
CCM2-211ENST00000478582 PYGLP06737 847 aa26.69■■□□□ 1.86
CCM2-211ENST00000478582 LMAN1P49257 510 aa26.69■■□□□ 1.86
CCM2-211ENST00000478582 DCDC1P59894 354 aa26.69■■□□□ 1.86
CCM2-211ENST00000478582 SHC2P98077 582 aa26.69■■□□□ 1.86
CCM2-211ENST00000478582 SUZ12Q15022 739 aaKnown RBP26.69■■□□□ 1.86
CCM2-211ENST00000478582 TRIP13Q15645 432 aaPredicted RBP26.69■■□□□ 1.86
CCM2-211ENST00000478582 KDM7AQ6ZMT4 941 aa26.69■■□□□ 1.86
CCM2-211ENST00000478582 GLT6D1Q7Z4J2 308 aa26.69■■□□□ 1.86
CCM2-211ENST00000478582 PELI3Q8N2H9 469 aa26.69■■□□□ 1.86
CCM2-211ENST00000478582 OXR1Q8N573 874 aa26.69■■□□□ 1.86
CCM2-211ENST00000478582 BRSK1Q8TDC3 778 aa26.69■■□□□ 1.86
CCM2-211ENST00000478582 AP2M1Q96CW1 435 aa26.69■■□□□ 1.86
CCM2-211ENST00000478582 FAM83DQ9H4H8 585 aa26.69■■□□□ 1.86
CCM2-211ENST00000478582 IL17CQ9P0M4 197 aa26.69■■□□□ 1.86
CCM2-211ENST00000478582 CD84Q9UIB8 345 aa26.69■■□□□ 1.86
CCM2-211ENST00000478582 CABIN1Q9Y6J0 2220 aa26.68■■□□□ 1.86
CCM2-211ENST00000478582 SPAARA0A1B0GVQ0 90 aa26.68■■□□□ 1.86
CCM2-211ENST00000478582 APRTP07741 180 aa26.68■■□□□ 1.86
CCM2-211ENST00000478582 PTGIRP43119 386 aa26.68■■□□□ 1.86
CCM2-211ENST00000478582 MAGEA6P43360 314 aa26.68■■□□□ 1.86
CCM2-211ENST00000478582 BASP1P80723 227 aaKnown RBP26.68■■□□□ 1.86
CCM2-211ENST00000478582 SIM1P81133 766 aaPredicted RBP26.68■■□□□ 1.86
CCM2-211ENST00000478582 CDK16Q00536 496 aa26.68■■□□□ 1.86
CCM2-211ENST00000478582 GPS1Q13098 491 aa26.68■■□□□ 1.86
CCM2-211ENST00000478582 PDE1CQ14123 709 aaPredicted RBP26.68■■□□□ 1.86
CCM2-211ENST00000478582 PTK2BQ14289 1009 aa26.68■■□□□ 1.86
CCM2-211ENST00000478582 TAF1AQ15573 450 aaPredicted RBP26.68■■□□□ 1.86
CCM2-211ENST00000478582 SCAMP4Q969E2 229 aa26.68■■□□□ 1.86
CCM2-211ENST00000478582 ELF4Q99607 663 aaPredicted RBP26.68■■□□□ 1.86
CCM2-211ENST00000478582 C19orf43Q9BQ61 176 aa26.68■■□□□ 1.86
CCM2-211ENST00000478582 K7ESM1 405 aa26.67■■□□□ 1.86
CCM2-211ENST00000478582 PPFIA2O75334 1257 aa26.67■■□□□ 1.86
CCM2-211ENST00000478582 TPSB2P20231 275 aa26.67■■□□□ 1.86
CCM2-211ENST00000478582 RXRGP48443 463 aa26.67■■□□□ 1.86
CCM2-211ENST00000478582 CDH17Q12864 832 aa26.67■■□□□ 1.86
CCM2-211ENST00000478582 FZD2Q14332 565 aa26.67■■□□□ 1.86
CCM2-211ENST00000478582 TRIP6Q15654 476 aaKnown RBP26.67■■□□□ 1.86
CCM2-211ENST00000478582 TPSAB1Q15661 275 aa26.67■■□□□ 1.86
CCM2-211ENST00000478582 TPRG1LQ5T0D9 272 aa26.67■■□□□ 1.86
CCM2-211ENST00000478582 HENMT1Q5T8I9 393 aaKnown RBP26.67■■□□□ 1.86
CCM2-211ENST00000478582 GPR26Q8NDV2 337 aa26.67■■□□□ 1.86
CCM2-211ENST00000478582 DTX3LQ8TDB6 740 aa26.67■■□□□ 1.86
CCM2-211ENST00000478582 RIOK2Q9BVS4 552 aaKnown RBP26.67■■□□□ 1.86
CCM2-211ENST00000478582 TEX101Q9BY14 249 aa26.67■■□□□ 1.86
CCM2-211ENST00000478582 CASS4Q9NQ75 786 aa26.67■■□□□ 1.86
CCM2-211ENST00000478582 CDC23Q9UJX2 597 aa26.67■■□□□ 1.86
CCM2-211ENST00000478582 FLRT2O43155 660 aa26.66■■□□□ 1.86
CCM2-211ENST00000478582 CBFA2T3O75081 653 aa26.66■■□□□ 1.86
CCM2-211ENST00000478582 CRTAMO95727 393 aa26.66■■□□□ 1.86
CCM2-211ENST00000478582 SOD1P00441 154 aa26.66■■□□□ 1.86
CCM2-211ENST00000478582 BPIP17213 487 aa26.66■■□□□ 1.86
CCM2-211ENST00000478582 CCT8P50990 548 aa26.66■■□□□ 1.86
CCM2-211ENST00000478582 THOP1P52888 689 aa26.66■■□□□ 1.86
CCM2-211ENST00000478582 KIAA1024LP59773 190 aa26.66■■□□□ 1.86
CCM2-211ENST00000478582 PDE1BQ01064 536 aa26.66■■□□□ 1.86
CCM2-211ENST00000478582 NFATC4Q14934 902 aa26.66■■□□□ 1.86
CCM2-211ENST00000478582 ZDHHC20Q5W0Z9 365 aa26.66■■□□□ 1.86
CCM2-211ENST00000478582 RAET1GQ6H3X3 334 aa26.66■■□□□ 1.86
CCM2-211ENST00000478582 ADAMTSL4Q6UY14 1074 aa26.66■■□□□ 1.86
CCM2-211ENST00000478582 MACC1Q6ZN28 852 aa26.66■■□□□ 1.86
CCM2-211ENST00000478582 SYDE1Q6ZW31 735 aaPredicted RBP26.66■■□□□ 1.86
CCM2-211ENST00000478582 ZNF572Q7Z3I7 529 aaPredicted RBP26.66■■□□□ 1.86
CCM2-211ENST00000478582 KLHL7Q8IXQ5 586 aa26.66■■□□□ 1.86
CCM2-211ENST00000478582 SPATA4Q8NEY3 305 aa26.66■■□□□ 1.86
CCM2-211ENST00000478582 OR52K1Q8NGK4 314 aa26.66■■□□□ 1.86
CCM2-211ENST00000478582 SETD7Q8WTS6 366 aaKnown RBP26.66■■□□□ 1.86
CCM2-211ENST00000478582 FUBP1Q96AE4 644 aaKnown RBP26.66■■□□□ 1.86
CCM2-211ENST00000478582 PLEKHG4BQ96PX9 1271 aa26.66■■□□□ 1.86
CCM2-211ENST00000478582 PCOLCE2Q9UKZ9 415 aa26.66■■□□□ 1.86
CCM2-211ENST00000478582 OR1A2Q9Y585 309 aa26.66■■□□□ 1.86
CCM2-211ENST00000478582 TP53BP1Q12888 1972 aaPredicted RBP26.66■■□□□ 1.86
CCM2-211ENST00000478582 A0A1B0GTQ1 180 aa26.65■■□□□ 1.86
CCM2-211ENST00000478582 C2orf81A6NN90 581 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms